RNA–Protein interactions for RNA: ENST00000481460.1

TRAPPC10-209, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-209ENST00000481460 RRAGCQ9HB90 399 aa8.04□□□□□ -1.12
TRAPPC10-209ENST00000481460 STRN4Q9NRL3 753 aa8.04□□□□□ -1.12
TRAPPC10-209ENST00000481460 NRXN1Q9ULB1 1477 aa8.04□□□□□ -1.12
TRAPPC10-209ENST00000481460 EEA1Q15075 1411 aa8.03□□□□□ -1.12
TRAPPC10-209ENST00000481460 LRRC37A3O60309 1634 aa8.03□□□□□ -1.12
TRAPPC10-209ENST00000481460 COL6A3P12111 3177 aa8.03□□□□□ -1.12
TRAPPC10-209ENST00000481460 LMOD2Q6P5Q4 547 aa8.03□□□□□ -1.12
TRAPPC10-209ENST00000481460 PHF8Q9UPP1 1060 aa8.03□□□□□ -1.12
TRAPPC10-209ENST00000481460 IGSF1Q8N6C5 1336 aa8.03□□□□□ -1.12
TRAPPC10-209ENST00000481460 AKAP12Q02952 1782 aa8.02□□□□□ -1.13
TRAPPC10-209ENST00000481460 NUTM2FA1L443 756 aa8.02□□□□□ -1.13
TRAPPC10-209ENST00000481460 LARP1Q6PKG0 1096 aaKnown RBP8.02□□□□□ -1.13
TRAPPC10-209ENST00000481460 CFAP44Q96MT7 982 aa8.02□□□□□ -1.13
TRAPPC10-209ENST00000481460 LRRC4BQ9NT99 713 aa8.02□□□□□ -1.13
TRAPPC10-209ENST00000481460 PCDHB8Q9UN66 801 aa8.02□□□□□ -1.13
TRAPPC10-209ENST00000481460 PCDHB13Q9Y5F0 798 aa8.02□□□□□ -1.13
TRAPPC10-209ENST00000481460 PKD1L3Q7Z443 1732 aa8.02□□□□□ -1.13
TRAPPC10-209ENST00000481460 KCPQ6ZWJ8 1503 aa8.02□□□□□ -1.13
TRAPPC10-209ENST00000481460 ACIN1Q9UKV3 1341 aaKnown RBP8.02□□□□□ -1.13
TRAPPC10-209ENST00000481460 KIAA0232Q92628 1395 aa8.01□□□□□ -1.13
TRAPPC10-209ENST00000481460 ZEB1P37275 1124 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC10-209ENST00000481460 IFNL1Q8IU54 200 aa8.01□□□□□ -1.13
TRAPPC10-209ENST00000481460 MARCH10Q8NA82 808 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC10-209ENST00000481460 MCOLN1Q9GZU1 580 aa8.01□□□□□ -1.13
TRAPPC10-209ENST00000481460 VGFO15240 615 aaPredicted RBP8□□□□□ -1.13
TRAPPC10-209ENST00000481460 VEGFBP49765 207 aa8□□□□□ -1.13
TRAPPC10-209ENST00000481460 ZNF467Q7Z7K2 595 aaPredicted RBP8□□□□□ -1.13
TRAPPC10-209ENST00000481460 MEGF6O75095 1541 aa7.99□□□□□ -1.13
TRAPPC10-209ENST00000481460 CASP8AP2Q9UKL3 1982 aa7.99□□□□□ -1.13
TRAPPC10-209ENST00000481460 EVA1CP58658 441 aa7.99□□□□□ -1.13
TRAPPC10-209ENST00000481460 DDB1Q16531 1140 aa7.99□□□□□ -1.13
TRAPPC10-209ENST00000481460 NHSQ6T4R5 1651 aa7.98□□□□□ -1.13
TRAPPC10-209ENST00000481460 MAP2K1Q02750 393 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC10-209ENST00000481460 CHRNA2Q15822 529 aa7.98□□□□□ -1.13
TRAPPC10-209ENST00000481460 TRIOBPQ9H2D6 2365 aa7.98□□□□□ -1.13
TRAPPC10-209ENST00000481460 LMO7Q8WWI1 1683 aa7.98□□□□□ -1.13
TRAPPC10-209ENST00000481460 SBF1O95248 1867 aa7.98□□□□□ -1.13
TRAPPC10-209ENST00000481460 KNDC1Q76NI1 1749 aa7.98□□□□□ -1.13
TRAPPC10-209ENST00000481460 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC10-209ENST00000481460 HS6ST3Q8IZP7 471 aa7.97□□□□□ -1.13
TRAPPC10-209ENST00000481460 ZFP91Q96JP5 570 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC10-209ENST00000481460 ANP32EQ9BTT0 268 aa7.97□□□□□ -1.13
TRAPPC10-209ENST00000481460 RRP7BPQ9NSQ0 103 aa7.97□□□□□ -1.13
TRAPPC10-209ENST00000481460 TAOK2Q9UL54 1235 aa7.97□□□□□ -1.13
TRAPPC10-209ENST00000481460 VEGFAP15692 232 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC10-209ENST00000481460 SLC27A3Q5K4L6 730 aa7.96□□□□□ -1.14
TRAPPC10-209ENST00000481460 C9orf131Q5VYM1 1079 aa7.96□□□□□ -1.14
TRAPPC10-209ENST00000481460 TFCP2L1Q9NZI6 479 aa7.96□□□□□ -1.14
TRAPPC10-209ENST00000481460 COL18A1P39060 1754 aa7.96□□□□□ -1.14
TRAPPC10-209ENST00000481460 BTAF1O14981 1849 aa7.96□□□□□ -1.14
TRAPPC10-209ENST00000481460 CLTCL1P53675 1640 aa7.96□□□□□ -1.14
TRAPPC10-209ENST00000481460 WNK3Q9BYP7 1800 aa7.95□□□□□ -1.14
TRAPPC10-209ENST00000481460 EIF5BO60841 1220 aaKnown RBP7.95□□□□□ -1.14
TRAPPC10-209ENST00000481460 PPARGC1BQ86YN6 1023 aaKnown RBP7.95□□□□□ -1.14
TRAPPC10-209ENST00000481460 MS4A3Q96HJ5 214 aa7.95□□□□□ -1.14
TRAPPC10-209ENST00000481460 TRPM1Q7Z4N2 1603 aa7.95□□□□□ -1.14
TRAPPC10-209ENST00000481460 E9PCH4 1651 aa7.95□□□□□ -1.14
TRAPPC10-209ENST00000481460 QRICH2Q9H0J4 1663 aa7.95□□□□□ -1.14
TRAPPC10-209ENST00000481460 ANKRD30BQ9BXX2 1392 aa7.95□□□□□ -1.14
TRAPPC10-209ENST00000481460 PDAP1Q13442 181 aaKnown RBP7.94□□□□□ -1.14
TRAPPC10-209ENST00000481460 COL23A1Q86Y22 540 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC10-209ENST00000481460 NBPF15Q8N660 670 aa7.94□□□□□ -1.14
TRAPPC10-209ENST00000481460 BBXQ8WY36 941 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC10-209ENST00000481460 KAT6BQ8WYB5 2073 aa7.94□□□□□ -1.14
TRAPPC10-209ENST00000481460 KIAA1551Q9HCM1 1747 aa7.94□□□□□ -1.14
TRAPPC10-209ENST00000481460 ARFGEF1Q9Y6D6 1849 aa7.94□□□□□ -1.14
TRAPPC10-209ENST00000481460 CRB1P82279 1406 aa7.94□□□□□ -1.14
TRAPPC10-209ENST00000481460 STK25O00506 426 aa7.93□□□□□ -1.14
TRAPPC10-209ENST00000481460 UBTFP17480 764 aaKnown RBP7.93□□□□□ -1.14
TRAPPC10-209ENST00000481460 PSEN1P49768 467 aa7.93□□□□□ -1.14
TRAPPC10-209ENST00000481460 SOX10P56693 466 aa7.93□□□□□ -1.14
TRAPPC10-209ENST00000481460 TRPC6Q9Y210 931 aa7.93□□□□□ -1.14
TRAPPC10-209ENST00000481460 KIF13BQ9NQT8 1826 aa7.93□□□□□ -1.14
TRAPPC10-209ENST00000481460 BRCA1P38398 1863 aaKnown RBP7.93□□□□□ -1.14
TRAPPC10-209ENST00000481460 MYOM3Q5VTT5 1437 aa7.93□□□□□ -1.14
TRAPPC10-209ENST00000481460 THSD7BQ9C0I4 1608 aa7.92□□□□□ -1.14
TRAPPC10-209ENST00000481460 PIK3C2AO00443 1686 aa7.92□□□□□ -1.14
TRAPPC10-209ENST00000481460 IFT172Q9UG01 1749 aa7.92□□□□□ -1.14
TRAPPC10-209ENST00000481460 GALR2O43603 387 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC10-209ENST00000481460 ARHGAP27Q6ZUM4 889 aa7.92□□□□□ -1.14
TRAPPC10-209ENST00000481460 CDCA7Q9BWT1 371 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC10-209ENST00000481460 ZC3H4Q9UPT8 1303 aaKnown RBP7.92□□□□□ -1.14
TRAPPC10-209ENST00000481460 RASSF10A6NK89 507 aa7.91□□□□□ -1.14
TRAPPC10-209ENST00000481460 CLCN6P51797 869 aa7.91□□□□□ -1.14
TRAPPC10-209ENST00000481460 WAPLQ7Z5K2 1190 aa7.91□□□□□ -1.14
TRAPPC10-209ENST00000481460 PASKQ96RG2 1323 aa7.91□□□□□ -1.14
TRAPPC10-209ENST00000481460 PRR36Q9H6K5 1346 aa7.91□□□□□ -1.14
TRAPPC10-209ENST00000481460 CPDO75976 1380 aa7.91□□□□□ -1.14
TRAPPC10-209ENST00000481460 SPATA31E1Q6ZUB1 1445 aa7.91□□□□□ -1.14
TRAPPC10-209ENST00000481460 COL5A2P05997 1499 aaPredicted RBP7.91□□□□□ -1.14
TRAPPC10-209ENST00000481460 CEP290O15078 2479 aa7.9□□□□□ -1.14
TRAPPC10-209ENST00000481460 POTECB2RU33 542 aa7.9□□□□□ -1.14
TRAPPC10-209ENST00000481460 ZC3H6P61129 1189 aaKnown RBP7.9□□□□□ -1.14
TRAPPC10-209ENST00000481460 DGKZQ13574 1117 aa7.9□□□□□ -1.14
TRAPPC10-209ENST00000481460 NKX1-1Q15270 411 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC10-209ENST00000481460 HIRIP3Q9BW71 556 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC10-209ENST00000481460 STK24Q9Y6E0 443 aa7.9□□□□□ -1.14
TRAPPC10-209ENST00000481460 USP6P35125 1406 aa7.89□□□□□ -1.15
TRAPPC10-209ENST00000481460 MKI67P46013 3256 aaKnown RBP7.89□□□□□ -1.15
TRAPPC10-209ENST00000481460 GLTPD2A6NH11 291 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms