RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 CYP2U1Q7Z449 544 aa11.65□□□□□ -0.54
GTF3C3-211ENST00000481098 SPINT1O43278 529 aa11.64□□□□□ -0.55
GTF3C3-211ENST00000481098 SENP2Q9HC62 589 aa11.64□□□□□ -0.55
GTF3C3-211ENST00000481098 OXLD1Q5BKU9 147 aa11.63□□□□□ -0.55
GTF3C3-211ENST00000481098 TRIM47Q96LD4 638 aa11.63□□□□□ -0.55
GTF3C3-211ENST00000481098 PPP1R12CQ9BZL4 782 aa11.63□□□□□ -0.55
GTF3C3-211ENST00000481098 USP17L3A6NCW0 530 aa11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 USP17L4A6NCW7 530 aa11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 PALM3A6NDB9 673 aaPredicted RBP11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 ATP5J2-PTCD1G3V325 749 aa11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 PTGIRP43119 386 aa11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 NCOA4Q13772 614 aa11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 EML3Q32P44 896 aa11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 USP17L2Q6R6M4 530 aa11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 USP17L1Q7RTZ2 530 aa11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 KIFC2Q96AC6 838 aa11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 AGBL1Q96MI9 1066 aa11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 ZFP42Q96MM3 310 aa11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 PURBQ96QR8 312 aaKnown RBP11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 GMPR2Q9P2T1 348 aaKnown RBP11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 MAFBQ9Y5Q3 323 aaPredicted RBP11.62□□□□□ -0.55
GTF3C3-211ENST00000481098 ESF1Q9H501 851 aaKnown RBP11.61□□□□□ -0.55
GTF3C3-211ENST00000481098 TFIP11Q9UBB9 837 aaKnown RBP11.61□□□□□ -0.55
GTF3C3-211ENST00000481098 GNRH1P01148 92 aa11.6□□□□□ -0.55
GTF3C3-211ENST00000481098 BMP2P12643 396 aa11.6□□□□□ -0.55
GTF3C3-211ENST00000481098 RELBQ01201 579 aa11.6□□□□□ -0.55
GTF3C3-211ENST00000481098 POTECB2RU33 542 aa11.58□□□□□ -0.56
GTF3C3-211ENST00000481098 C6orf118Q5T5N4 469 aa11.58□□□□□ -0.56
GTF3C3-211ENST00000481098 DEPDC4Q8N2C3 294 aa11.58□□□□□ -0.56
GTF3C3-211ENST00000481098 NOD1Q9Y239 953 aa11.58□□□□□ -0.56
GTF3C3-211ENST00000481098 CLN3Q13286 438 aa11.57□□□□□ -0.56
GTF3C3-211ENST00000481098 CFAP70Q5T0N1 1121 aa11.57□□□□□ -0.56
GTF3C3-211ENST00000481098 SOS2Q07890 1332 aaPredicted RBP11.57□□□□□ -0.56
GTF3C3-211ENST00000481098 A0A1W2PRU2 124 aa11.56□□□□□ -0.56
GTF3C3-211ENST00000481098 ARID3CA6NKF2 412 aa11.56□□□□□ -0.56
GTF3C3-211ENST00000481098 C1orf115Q9H7X2 142 aa11.56□□□□□ -0.56
GTF3C3-211ENST00000481098 ZNF395Q9H8N7 513 aaPredicted RBP11.56□□□□□ -0.56
GTF3C3-211ENST00000481098 PCDHGA11Q9Y5H2 935 aa11.56□□□□□ -0.56
GTF3C3-211ENST00000481098 WASLO00401 505 aaPredicted RBP11.55□□□□□ -0.56
GTF3C3-211ENST00000481098 SERPINA10Q9UK55 444 aa11.55□□□□□ -0.56
GTF3C3-211ENST00000481098 C11orf95C9JLR9 678 aaPredicted RBP11.54□□□□□ -0.56
GTF3C3-211ENST00000481098 TRIM50Q86XT4 487 aa11.54□□□□□ -0.56
GTF3C3-211ENST00000481098 INSM2Q96T92 566 aaPredicted RBP11.54□□□□□ -0.56
GTF3C3-211ENST00000481098 ARHGEF10LQ9HCE6 1279 aa11.54□□□□□ -0.56
GTF3C3-211ENST00000481098 HRH3Q9Y5N1 445 aa11.54□□□□□ -0.56
GTF3C3-211ENST00000481098 SNRPBP14678 240 aaKnown RBP11.53□□□□□ -0.56
GTF3C3-211ENST00000481098 GPC1P35052 558 aa11.53□□□□□ -0.56
GTF3C3-211ENST00000481098 RNF144AP50876 292 aaPredicted RBP11.53□□□□□ -0.56
GTF3C3-211ENST00000481098 SCNN1DP51172 638 aa11.53□□□□□ -0.56
GTF3C3-211ENST00000481098 GTF2IP78347 998 aa11.53□□□□□ -0.56
GTF3C3-211ENST00000481098 ESCO1Q5FWF5 840 aa11.53□□□□□ -0.56
GTF3C3-211ENST00000481098 TTLL8A6PVC2 850 aa11.52□□□□□ -0.57
GTF3C3-211ENST00000481098 CTSOP43234 321 aaPredicted RBP11.52□□□□□ -0.57
GTF3C3-211ENST00000481098 KANK4Q5T7N3 995 aaPredicted RBP11.52□□□□□ -0.57
GTF3C3-211ENST00000481098 ZNF787Q6DD87 383 aa11.52□□□□□ -0.57
GTF3C3-211ENST00000481098 ESYT1Q9BSJ8 1104 aa11.52□□□□□ -0.57
GTF3C3-211ENST00000481098 MKRN1Q9UHC7 482 aaKnown RBP11.52□□□□□ -0.57
GTF3C3-211ENST00000481098 IL2RAP01589 272 aa11.51□□□□□ -0.57
GTF3C3-211ENST00000481098 LMOD1P29536 600 aaPredicted RBP11.51□□□□□ -0.57
GTF3C3-211ENST00000481098 ATP1A2P50993 1020 aa11.51□□□□□ -0.57
GTF3C3-211ENST00000481098 FOXD4L5Q5VV16 416 aaPredicted RBP11.51□□□□□ -0.57
GTF3C3-211ENST00000481098 CCDC97Q96F63 343 aaPredicted RBP11.51□□□□□ -0.57
GTF3C3-211ENST00000481098 XAGE2Q96GT9 111 aa11.51□□□□□ -0.57
GTF3C3-211ENST00000481098 ETNK1Q9HBU6 452 aa11.51□□□□□ -0.57
GTF3C3-211ENST00000481098 CLDN10P78369 228 aa11.5□□□□□ -0.57
GTF3C3-211ENST00000481098 RNF217Q8TC41 542 aa11.5□□□□□ -0.57
GTF3C3-211ENST00000481098 POLMQ9NP87 494 aaPredicted RBP11.5□□□□□ -0.57
GTF3C3-211ENST00000481098 DNMT3LQ9UJW3 386 aa11.5□□□□□ -0.57
GTF3C3-211ENST00000481098 INHAP05111 366 aa11.49□□□□□ -0.57
GTF3C3-211ENST00000481098 LARGE2Q8N3Y3 721 aa11.49□□□□□ -0.57
GTF3C3-211ENST00000481098 CNKSR1Q969H4 720 aa11.49□□□□□ -0.57
GTF3C3-211ENST00000481098 RAB6BQ9NRW1 208 aa11.49□□□□□ -0.57
GTF3C3-211ENST00000481098 TMEM229AB2RXF0 380 aa11.48□□□□□ -0.57
GTF3C3-211ENST00000481098 MEN1O00255 615 aa11.48□□□□□ -0.57
GTF3C3-211ENST00000481098 ZBTB7BO15156 539 aaPredicted RBP11.48□□□□□ -0.57
GTF3C3-211ENST00000481098 GDF10P55107 478 aa11.48□□□□□ -0.57
GTF3C3-211ENST00000481098 SIX5Q8N196 739 aa11.48□□□□□ -0.57
GTF3C3-211ENST00000481098 CCDC82Q8N4S0 544 aa11.48□□□□□ -0.57
GTF3C3-211ENST00000481098 OGFOD1Q8N543 542 aa11.48□□□□□ -0.57
GTF3C3-211ENST00000481098 NLRP3Q96P20 1036 aa11.48□□□□□ -0.57
GTF3C3-211ENST00000481098 SRPK2P78362 688 aaKnown RBP11.47□□□□□ -0.57
GTF3C3-211ENST00000481098 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.47□□□□□ -0.57
GTF3C3-211ENST00000481098 DNAAF2Q9NVR5 837 aaKnown RBP11.47□□□□□ -0.57
GTF3C3-211ENST00000481098 KIAA1024Q9UPX6 916 aa11.47□□□□□ -0.57
GTF3C3-211ENST00000481098 MAN1A2O60476 641 aa11.46□□□□□ -0.57
GTF3C3-211ENST00000481098 DKK1O94907 266 aa11.46□□□□□ -0.57
GTF3C3-211ENST00000481098 STAU1O95793 577 aaKnown RBP11.46□□□□□ -0.57
GTF3C3-211ENST00000481098 SLC4A9Q96Q91 983 aa11.46□□□□□ -0.57
GTF3C3-211ENST00000481098 FHDC1Q9C0D6 1143 aaPredicted RBP11.46□□□□□ -0.57
GTF3C3-211ENST00000481098 GRIP2Q9C0E4 1043 aa11.46□□□□□ -0.57
GTF3C3-211ENST00000481098 VRTNQ9H8Y1 702 aa11.46□□□□□ -0.57
GTF3C3-211ENST00000481098 FAM196BA6NMK8 535 aa11.45□□□□□ -0.58
GTF3C3-211ENST00000481098 RASA1P20936 1047 aa11.44□□□□□ -0.58
GTF3C3-211ENST00000481098 CENPCQ03188 943 aa11.44□□□□□ -0.58
GTF3C3-211ENST00000481098 PSME1Q06323 249 aa11.44□□□□□ -0.58
GTF3C3-211ENST00000481098 PTK7Q13308 1070 aa11.44□□□□□ -0.58
GTF3C3-211ENST00000481098 SOBPA7XYQ1 873 aa11.43□□□□□ -0.58
GTF3C3-211ENST00000481098 CRTC2Q53ET0 693 aaPredicted RBP11.43□□□□□ -0.58
GTF3C3-211ENST00000481098 CCDC102BQ68D86 513 aa11.43□□□□□ -0.58
GTF3C3-211ENST00000481098 LYSMD3Q7Z3D4 306 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 450.6 ms