RNA–Protein interactions for RNA: ENST00000480747.1

CKAP2-206, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 4

Gene CKAP2, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-206ENST00000480747 CRTC2Q53ET0 693 aaPredicted RBP9.69□□□□□ -0.86
CKAP2-206ENST00000480747 PDXDC2PQ6P474 469 aa9.69□□□□□ -0.86
CKAP2-206ENST00000480747 NFATC2IPQ8NCF5 419 aa9.69□□□□□ -0.86
CKAP2-206ENST00000480747 KIFC2Q96AC6 838 aa9.69□□□□□ -0.86
CKAP2-206ENST00000480747 SKIP12755 728 aa9.68□□□□□ -0.86
CKAP2-206ENST00000480747 B4GALNT3Q6L9W6 998 aa9.68□□□□□ -0.86
CKAP2-206ENST00000480747 PLEKHM2Q8IWE5 1019 aa9.68□□□□□ -0.86
CKAP2-206ENST00000480747 CARD14Q9BXL6 1004 aa9.68□□□□□ -0.86
CKAP2-206ENST00000480747 MAP4K5Q9Y4K4 846 aa9.68□□□□□ -0.86
CKAP2-206ENST00000480747 BMP1P13497 986 aa9.67□□□□□ -0.86
CKAP2-206ENST00000480747 TIMP2P16035 220 aa9.67□□□□□ -0.86
CKAP2-206ENST00000480747 WDR4P57081 412 aaKnown RBP9.67□□□□□ -0.86
CKAP2-206ENST00000480747 ARHGAP9Q9BRR9 750 aa9.67□□□□□ -0.86
CKAP2-206ENST00000480747 USP17L15C9J2P7 530 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 USP17L10C9JJH3 530 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 USP17L13C9JLJ4 530 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 USP17L12C9JPN9 530 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 USP17L11C9JVI0 530 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 USP17L21D6R901 530 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 USP17L18D6R9N7 530 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 USP17L22D6RA61 530 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 USP17L17D6RBQ6 530 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 USP17L19D6RCP7 530 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 USP17L20D6RJB6 530 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 GRM5P41594 1212 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 FAM69CQ0P6D2 419 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 USP17L24Q0WX57 530 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 ERFEQ4G0M1 354 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 NOM1Q5C9Z4 860 aaKnown RBP9.66□□□□□ -0.86
CKAP2-206ENST00000480747 TRIM46Q7Z4K8 759 aa9.66□□□□□ -0.86
CKAP2-206ENST00000480747 KLF16Q9BXK1 252 aaPredicted RBP9.66□□□□□ -0.86
CKAP2-206ENST00000480747 FAM196BA6NMK8 535 aa9.65□□□□□ -0.86
CKAP2-206ENST00000480747 NR3C2P08235 984 aa9.65□□□□□ -0.86
CKAP2-206ENST00000480747 SNRPBP14678 240 aaKnown RBP9.65□□□□□ -0.86
CKAP2-206ENST00000480747 SSFA2P28290 1259 aa9.65□□□□□ -0.86
CKAP2-206ENST00000480747 FSHRP23945 695 aa9.64□□□□□ -0.87
CKAP2-206ENST00000480747 PTK7Q13308 1070 aa9.64□□□□□ -0.87
CKAP2-206ENST00000480747 DNAJC14Q6Y2X3 702 aaPredicted RBP9.64□□□□□ -0.87
CKAP2-206ENST00000480747 VASH1Q7L8A9 365 aaPredicted RBP9.64□□□□□ -0.87
CKAP2-206ENST00000480747 CCER1Q8TC90 406 aaPredicted RBP9.64□□□□□ -0.87
CKAP2-206ENST00000480747 MKRN1Q9UHC7 482 aaKnown RBP9.64□□□□□ -0.87
CKAP2-206ENST00000480747 GPSM3Q9Y4H4 160 aa9.64□□□□□ -0.87
CKAP2-206ENST00000480747 SCNN1AP37088 669 aa9.63□□□□□ -0.87
CKAP2-206ENST00000480747 PTK2Q05397 1052 aa9.63□□□□□ -0.87
CKAP2-206ENST00000480747 OCSTAMPQ9BR26 566 aa9.63□□□□□ -0.87
CKAP2-206ENST00000480747 RBM47A0AV96 593 aaKnown RBP9.62□□□□□ -0.87
CKAP2-206ENST00000480747 ZIC2O95409 532 aaPredicted RBP9.62□□□□□ -0.87
CKAP2-206ENST00000480747 NCOA4Q13772 614 aa9.62□□□□□ -0.87
CKAP2-206ENST00000480747 ZBTB33Q86T24 672 aa9.62□□□□□ -0.87
CKAP2-206ENST00000480747 ITPKCQ96DU7 683 aa9.62□□□□□ -0.87
CKAP2-206ENST00000480747 SLC10A4Q96EP9 437 aa9.62□□□□□ -0.87
CKAP2-206ENST00000480747 CDV3Q9UKY7 258 aaKnown RBP9.61□□□□□ -0.87
CKAP2-206ENST00000480747 SERPINB4P48594 390 aa9.6□□□□□ -0.87
CKAP2-206ENST00000480747 MRPL14Q6P1L8 145 aaKnown RBP9.6□□□□□ -0.87
CKAP2-206ENST00000480747 PHTF2Q8N3S3 785 aa9.6□□□□□ -0.87
CKAP2-206ENST00000480747 CLP1Q92989 425 aaKnown RBP9.6□□□□□ -0.87
CKAP2-206ENST00000480747 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
CKAP2-206ENST00000480747 CEP126Q9P2H0 1117 aa9.6□□□□□ -0.87
CKAP2-206ENST00000480747 SOWAHDA6NJG2 315 aa9.59□□□□□ -0.87
CKAP2-206ENST00000480747 RASA1P20936 1047 aa9.59□□□□□ -0.87
CKAP2-206ENST00000480747 ARID4AP29374 1257 aaPredicted RBP9.59□□□□□ -0.87
CKAP2-206ENST00000480747 SCARF1Q14162 830 aa9.59□□□□□ -0.87
CKAP2-206ENST00000480747 TREML4Q6UXN2 200 aa9.59□□□□□ -0.87
CKAP2-206ENST00000480747 CCDC116Q8IYX3 515 aa9.59□□□□□ -0.87
CKAP2-206ENST00000480747 ZFP42Q96MM3 310 aa9.59□□□□□ -0.87
CKAP2-206ENST00000480747 IGSF5Q9NSI5 407 aa9.59□□□□□ -0.87
CKAP2-206ENST00000480747 KIAA1522Q9P206 1035 aaPredicted RBP9.59□□□□□ -0.87
CKAP2-206ENST00000480747 ADAM32Q8TC27 787 aa9.58□□□□□ -0.88
CKAP2-206ENST00000480747 EMILIN1Q9Y6C2 1016 aa9.58□□□□□ -0.88
CKAP2-206ENST00000480747 LARP1Q6PKG0 1096 aaKnown RBP9.57□□□□□ -0.88
CKAP2-206ENST00000480747 PLPP7Q8NBV4 271 aa9.57□□□□□ -0.88
CKAP2-206ENST00000480747 FAM200AQ8TCP9 573 aa9.57□□□□□ -0.88
CKAP2-206ENST00000480747 PURBQ96QR8 312 aaKnown RBP9.57□□□□□ -0.88
CKAP2-206ENST00000480747 KCTD15Q96SI1 283 aaPredicted RBP9.57□□□□□ -0.88
CKAP2-206ENST00000480747 ATP5J2-PTCD1G3V325 749 aa9.56□□□□□ -0.88
CKAP2-206ENST00000480747 ATP2B4P23634 1241 aa9.56□□□□□ -0.88
CKAP2-206ENST00000480747 TSGA10IPQ3SY00 556 aa9.56□□□□□ -0.88
CKAP2-206ENST00000480747 SLFNL1Q499Z3 407 aa9.56□□□□□ -0.88
CKAP2-206ENST00000480747 RNF135Q8IUD6 432 aa9.56□□□□□ -0.88
CKAP2-206ENST00000480747 ANKMY2Q8IV38 441 aa9.56□□□□□ -0.88
CKAP2-206ENST00000480747 MEIOBQ8N635 442 aa9.56□□□□□ -0.88
CKAP2-206ENST00000480747 CDCA7Q9BWT1 371 aaPredicted RBP9.56□□□□□ -0.88
CKAP2-206ENST00000480747 CHIC2Q9UKJ5 165 aa9.56□□□□□ -0.88
CKAP2-206ENST00000480747 CLDN10P78369 228 aa9.55□□□□□ -0.88
CKAP2-206ENST00000480747 DPYDQ12882 1025 aa9.55□□□□□ -0.88
CKAP2-206ENST00000480747 LCE2AQ5TA79 106 aaPredicted RBP9.55□□□□□ -0.88
CKAP2-206ENST00000480747 PCDHB9Q9Y5E1 797 aa9.55□□□□□ -0.88
CKAP2-206ENST00000480747 WFS1O76024 890 aa9.54□□□□□ -0.88
CKAP2-206ENST00000480747 NFX1Q12986 1120 aaKnown RBP9.54□□□□□ -0.88
CKAP2-206ENST00000480747 NBPF20Q3BBV1 942 aa9.54□□□□□ -0.88
CKAP2-206ENST00000480747 OGFOD1Q8N543 542 aa9.54□□□□□ -0.88
CKAP2-206ENST00000480747 ZNF594Q96JF6 807 aaPredicted RBP9.54□□□□□ -0.88
CKAP2-206ENST00000480747 PGPEP1Q9NXJ5 209 aa9.54□□□□□ -0.88
CKAP2-206ENST00000480747 TERTO14746 1132 aaKnown RBP9.53□□□□□ -0.88
CKAP2-206ENST00000480747 UPP2O95045 317 aa9.53□□□□□ -0.88
CKAP2-206ENST00000480747 DHX9Q08211 1270 aaKnown RBP9.53□□□□□ -0.88
CKAP2-206ENST00000480747 INTS6LQ5JSJ4 861 aaKnown RBP9.53□□□□□ -0.88
CKAP2-206ENST00000480747 PPP1R26Q5T8A7 1209 aaPredicted RBP9.53□□□□□ -0.88
CKAP2-206ENST00000480747 LINC00528Q8N1L1 170 aa9.53□□□□□ -0.88
CKAP2-206ENST00000480747 DKK1O94907 266 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms