RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 RSPH6AQ9H0K4 717 aa13.71□□□□□ -0.21
LINC00173-203ENST00000480237 RRP7AQ9Y3A4 280 aaKnown RBP13.71□□□□□ -0.21
LINC00173-203ENST00000480237 PLCH1Q4KWH8 1693 aa13.71□□□□□ -0.21
LINC00173-203ENST00000480237 ZNF521Q96K83 1311 aa13.71□□□□□ -0.21
LINC00173-203ENST00000480237 COL16A1Q07092 1604 aaPredicted RBP13.71□□□□□ -0.22
LINC00173-203ENST00000480237 ZBTB7CA1YPR0 619 aa13.71□□□□□ -0.22
LINC00173-203ENST00000480237 FCHSD2O94868 740 aa13.71□□□□□ -0.22
LINC00173-203ENST00000480237 HOXC9P31274 260 aa13.71□□□□□ -0.22
LINC00173-203ENST00000480237 PRKAR2BP31323 418 aa13.71□□□□□ -0.22
LINC00173-203ENST00000480237 LRRC37A3O60309 1634 aa13.7□□□□□ -0.22
LINC00173-203ENST00000480237 SCN11AQ9UI33 1791 aa13.7□□□□□ -0.22
LINC00173-203ENST00000480237 NEFLP07196 543 aa13.7□□□□□ -0.22
LINC00173-203ENST00000480237 PLEKHF1Q96S99 279 aa13.7□□□□□ -0.22
LINC00173-203ENST00000480237 SPATA31A3Q5VYP0 1347 aa13.69□□□□□ -0.22
LINC00173-203ENST00000480237 GOLGA2Q08379 1002 aa13.69□□□□□ -0.22
LINC00173-203ENST00000480237 KIF12Q96FN5 646 aa13.69□□□□□ -0.22
LINC00173-203ENST00000480237 CDCA7LQ96GN5 454 aa13.69□□□□□ -0.22
LINC00173-203ENST00000480237 PKD1L3Q7Z443 1732 aa13.68□□□□□ -0.22
LINC00173-203ENST00000480237 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
LINC00173-203ENST00000480237 CHRM1P11229 460 aaPredicted RBP13.68□□□□□ -0.22
LINC00173-203ENST00000480237 KAT6BQ8WYB5 2073 aa13.68□□□□□ -0.22
LINC00173-203ENST00000480237 SIPA1L3O60292 1781 aaPredicted RBP13.68□□□□□ -0.22
LINC00173-203ENST00000480237 MAP3K13O43283 966 aa13.67□□□□□ -0.22
LINC00173-203ENST00000480237 GCP02774 474 aa13.67□□□□□ -0.22
LINC00173-203ENST00000480237 SOS2Q07890 1332 aaPredicted RBP13.67□□□□□ -0.22
LINC00173-203ENST00000480237 TMPOP42166 694 aaKnown RBP13.66□□□□□ -0.22
LINC00173-203ENST00000480237 SULT6B1Q6IMI4 303 aa13.66□□□□□ -0.22
LINC00173-203ENST00000480237 IP6K1Q92551 441 aa13.66□□□□□ -0.22
LINC00173-203ENST00000480237 SUPT16HQ9Y5B9 1047 aaKnown RBP13.66□□□□□ -0.22
LINC00173-203ENST00000480237 CCDC27Q2M243 656 aa13.66□□□□□ -0.22
LINC00173-203ENST00000480237 AEBP1Q8IUX7 1158 aa13.66□□□□□ -0.22
LINC00173-203ENST00000480237 WWC1Q8IX03 1113 aa13.66□□□□□ -0.22
LINC00173-203ENST00000480237 LTV1Q96GA3 475 aaPredicted RBP13.66□□□□□ -0.22
LINC00173-203ENST00000480237 IGSF1Q8N6C5 1336 aa13.66□□□□□ -0.22
LINC00173-203ENST00000480237 KDRP35968 1356 aa13.65□□□□□ -0.22
LINC00173-203ENST00000480237 SHANK3Q9BYB0 1731 aa13.64□□□□□ -0.23
LINC00173-203ENST00000480237 KDM3BQ7LBC6 1761 aa13.64□□□□□ -0.23
LINC00173-203ENST00000480237 E9PSI1 815 aa13.64□□□□□ -0.23
LINC00173-203ENST00000480237 NFE2L2Q16236 605 aa13.64□□□□□ -0.23
LINC00173-203ENST00000480237 ARHGEF25Q86VW2 580 aa13.64□□□□□ -0.23
LINC00173-203ENST00000480237 PCDHB13Q9Y5F0 798 aa13.64□□□□□ -0.23
LINC00173-203ENST00000480237 RGL2O15211 777 aa13.63□□□□□ -0.23
LINC00173-203ENST00000480237 RIPK4P57078 832 aa13.63□□□□□ -0.23
LINC00173-203ENST00000480237 SLFN5Q08AF3 891 aa13.63□□□□□ -0.23
LINC00173-203ENST00000480237 NRAPQ86VF7 1730 aa13.63□□□□□ -0.23
LINC00173-203ENST00000480237 NWD2Q9ULI1 1742 aa13.63□□□□□ -0.23
LINC00173-203ENST00000480237 ZC3H6P61129 1189 aaKnown RBP13.62□□□□□ -0.23
LINC00173-203ENST00000480237 WDR63Q8IWG1 891 aa13.62□□□□□ -0.23
LINC00173-203ENST00000480237 CABLES1Q8TDN4 633 aa13.62□□□□□ -0.23
LINC00173-203ENST00000480237 PHACTR3Q96KR7 559 aa13.62□□□□□ -0.23
LINC00173-203ENST00000480237 EYA1Q99502 592 aa13.62□□□□□ -0.23
LINC00173-203ENST00000480237 CPDO75976 1380 aa13.62□□□□□ -0.23
LINC00173-203ENST00000480237 DUSP27Q5VZP5 1158 aa13.62□□□□□ -0.23
LINC00173-203ENST00000480237 NCAPD2Q15021 1401 aa13.61□□□□□ -0.23
LINC00173-203ENST00000480237 KIAA0232Q92628 1395 aa13.61□□□□□ -0.23
LINC00173-203ENST00000480237 HAP1P54257 671 aaPredicted RBP13.61□□□□□ -0.23
LINC00173-203ENST00000480237 LMOD3Q0VAK6 560 aa13.61□□□□□ -0.23
LINC00173-203ENST00000480237 RCAN3Q9UKA8 241 aa13.61□□□□□ -0.23
LINC00173-203ENST00000480237 RNF25Q96BH1 459 aaPredicted RBP13.6□□□□□ -0.23
LINC00173-203ENST00000480237 PCDHB8Q9UN66 801 aa13.6□□□□□ -0.23
LINC00173-203ENST00000480237 TRIM35Q9UPQ4 493 aa13.6□□□□□ -0.23
LINC00173-203ENST00000480237 ADAMTS7Q9UKP4 1686 aa13.59□□□□□ -0.23
LINC00173-203ENST00000480237 SP7Q8TDD2 431 aaPredicted RBP13.59□□□□□ -0.23
LINC00173-203ENST00000480237 ANKRD24Q8TF21 1146 aa13.59□□□□□ -0.23
LINC00173-203ENST00000480237 MS4A3Q96HJ5 214 aa13.59□□□□□ -0.23
LINC00173-203ENST00000480237 TRMT2AQ8IZ69 625 aaKnown RBP13.58□□□□□ -0.23
LINC00173-203ENST00000480237 USHBP1Q8N6Y0 703 aa13.58□□□□□ -0.23
LINC00173-203ENST00000480237 MYH16Q9H6N6 1097 aa13.58□□□□□ -0.23
LINC00173-203ENST00000480237 ITGB4P16144 1822 aa13.58□□□□□ -0.24
LINC00173-203ENST00000480237 IL16Q14005 1332 aa13.58□□□□□ -0.24
LINC00173-203ENST00000480237 IFNL1Q8IU54 200 aa13.58□□□□□ -0.24
LINC00173-203ENST00000480237 SGIP1Q9BQI5 828 aa13.58□□□□□ -0.24
LINC00173-203ENST00000480237 ERBB3P21860 1342 aa13.57□□□□□ -0.24
LINC00173-203ENST00000480237 GALR2O43603 387 aaPredicted RBP13.57□□□□□ -0.24
LINC00173-203ENST00000480237 TOM1O60784 492 aa13.57□□□□□ -0.24
LINC00173-203ENST00000480237 GABBR2O75899 941 aa13.57□□□□□ -0.24
LINC00173-203ENST00000480237 IRX6P78412 446 aaPredicted RBP13.57□□□□□ -0.24
LINC00173-203ENST00000480237 CALD1Q05682 793 aaKnown RBP13.57□□□□□ -0.24
LINC00173-203ENST00000480237 LRRC59Q96AG4 307 aaKnown RBP13.57□□□□□ -0.24
LINC00173-203ENST00000480237 COL5A2P05997 1499 aaPredicted RBP13.56□□□□□ -0.24
LINC00173-203ENST00000480237 RIOK3O14730 519 aaKnown RBP13.56□□□□□ -0.24
LINC00173-203ENST00000480237 CHRNA2Q15822 529 aa13.56□□□□□ -0.24
LINC00173-203ENST00000480237 ZNF467Q7Z7K2 595 aaPredicted RBP13.56□□□□□ -0.24
LINC00173-203ENST00000480237 GAS2L2Q8NHY3 880 aa13.56□□□□□ -0.24
LINC00173-203ENST00000480237 PRDM11Q9NQV5 511 aa13.56□□□□□ -0.24
LINC00173-203ENST00000480237 AXIN2Q9Y2T1 843 aa13.56□□□□□ -0.24
LINC00173-203ENST00000480237 N4BP2Q86UW6 1770 aaPredicted RBP13.55□□□□□ -0.24
LINC00173-203ENST00000480237 FANCIQ9NVI1 1328 aa13.55□□□□□ -0.24
LINC00173-203ENST00000480237 NBPF6Q5VWK0 638 aa13.55□□□□□ -0.24
LINC00173-203ENST00000480237 NBPF4Q96M43 638 aa13.55□□□□□ -0.24
LINC00173-203ENST00000480237 RNF123Q5XPI4 1314 aa13.55□□□□□ -0.24
LINC00173-203ENST00000480237 CLCN6P51797 869 aa13.54□□□□□ -0.24
LINC00173-203ENST00000480237 RRP1P56182 461 aaKnown RBP13.54□□□□□ -0.24
LINC00173-203ENST00000480237 PIP4K2BP78356 416 aa13.54□□□□□ -0.24
LINC00173-203ENST00000480237 MAP3K5Q99683 1374 aa13.54□□□□□ -0.24
LINC00173-203ENST00000480237 UBAP1LF5GYI3 381 aa13.54□□□□□ -0.24
LINC00173-203ENST00000480237 CSB-PGBD3P0DP91 1061 aa13.54□□□□□ -0.24
LINC00173-203ENST00000480237 THUMPD2Q9BTF0 503 aaKnown RBP13.54□□□□□ -0.24
LINC00173-203ENST00000480237 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.53□□□□□ -0.24
LINC00173-203ENST00000480237 FAM83GA6ND36 823 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms