RNA–Protein interactions for RNA: ENST00000478466.1

CACNA2D3-209, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

TSL 3

Gene CACNA2D3, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-209ENST00000478466 NBPF6Q5VWK0 638 aa17.31■□□□□ 0.36
CACNA2D3-209ENST00000478466 ZNF784Q8NCA9 323 aaPredicted RBP17.31■□□□□ 0.36
CACNA2D3-209ENST00000478466 NBPF4Q96M43 638 aa17.31■□□□□ 0.36
CACNA2D3-209ENST00000478466 GGNBP2Q9H3C7 697 aa17.31■□□□□ 0.36
CACNA2D3-209ENST00000478466 MYOM1P52179 1685 aa17.31■□□□□ 0.36
CACNA2D3-209ENST00000478466 RAPGEF4Q8WZA2 1011 aa17.3■□□□□ 0.36
CACNA2D3-209ENST00000478466 RTL1A6NKG5 1358 aa17.29■□□□□ 0.36
CACNA2D3-209ENST00000478466 PNPLA7Q6ZV29 1317 aa17.29■□□□□ 0.36
CACNA2D3-209ENST00000478466 KCNQ4P56696 695 aa17.29■□□□□ 0.36
CACNA2D3-209ENST00000478466 PAPPAQ13219 1627 aa17.29■□□□□ 0.36
CACNA2D3-209ENST00000478466 TATP17735 454 aaPredicted RBP17.28■□□□□ 0.36
CACNA2D3-209ENST00000478466 GPR162Q16538 588 aa17.28■□□□□ 0.36
CACNA2D3-209ENST00000478466 CCNL1Q9UK58 526 aaPredicted RBP17.28■□□□□ 0.36
CACNA2D3-209ENST00000478466 FAM208AQ9UK61 1670 aaKnown RBP17.27■□□□□ 0.36
CACNA2D3-209ENST00000478466 HSP90AB2PQ58FF8 381 aa17.26■□□□□ 0.35
CACNA2D3-209ENST00000478466 USP47Q96K76 1375 aa17.26■□□□□ 0.35
CACNA2D3-209ENST00000478466 SMG6Q86US8 1419 aaKnown RBP17.25■□□□□ 0.35
CACNA2D3-209ENST00000478466 USHBP1Q8N6Y0 703 aa17.25■□□□□ 0.35
CACNA2D3-209ENST00000478466 NSD2O96028 1365 aa17.25■□□□□ 0.35
CACNA2D3-209ENST00000478466 INSRP06213 1382 aa17.25■□□□□ 0.35
CACNA2D3-209ENST00000478466 KLHL34Q8N239 644 aa17.24■□□□□ 0.35
CACNA2D3-209ENST00000478466 MEGF6O75095 1541 aa17.24■□□□□ 0.35
CACNA2D3-209ENST00000478466 KIF24Q5T7B8 1368 aa17.24■□□□□ 0.35
CACNA2D3-209ENST00000478466 MSH5O43196 834 aa17.23■□□□□ 0.35
CACNA2D3-209ENST00000478466 TRIM26Q12899 539 aaPredicted RBP17.23■□□□□ 0.35
CACNA2D3-209ENST00000478466 PCDH11XQ9BZA7 1347 aa17.22■□□□□ 0.35
CACNA2D3-209ENST00000478466 PCDH11YQ9BZA8 1340 aa17.22■□□□□ 0.35
CACNA2D3-209ENST00000478466 COL23A1Q86Y22 540 aaPredicted RBP17.22■□□□□ 0.35
CACNA2D3-209ENST00000478466 FLT4P35916 1363 aa17.21■□□□□ 0.35
CACNA2D3-209ENST00000478466 FLAD1Q8NFF5 587 aa17.21■□□□□ 0.35
CACNA2D3-209ENST00000478466 CARD14Q9BXL6 1004 aa17.21■□□□□ 0.35
CACNA2D3-209ENST00000478466 UTRNP46939 3433 aa17.21■□□□□ 0.35
CACNA2D3-209ENST00000478466 CHD4Q14839 1912 aa17.21■□□□□ 0.35
CACNA2D3-209ENST00000478466 MPRIPQ6WCQ1 1025 aa17.2■□□□□ 0.34
CACNA2D3-209ENST00000478466 PELP1Q8IZL8 1130 aaKnown RBP17.2■□□□□ 0.34
CACNA2D3-209ENST00000478466 SMARCC1Q92922 1105 aaPredicted RBP17.2■□□□□ 0.34
CACNA2D3-209ENST00000478466 TIMELESSQ9UNS1 1208 aa17.2■□□□□ 0.34
CACNA2D3-209ENST00000478466 CYP27B1O15528 508 aa17.19■□□□□ 0.34
CACNA2D3-209ENST00000478466 GRIN3BO60391 1043 aa17.19■□□□□ 0.34
CACNA2D3-209ENST00000478466 RGPD2P0DJD1 1756 aa17.18■□□□□ 0.34
CACNA2D3-209ENST00000478466 NLGN2Q8NFZ4 835 aa17.18■□□□□ 0.34
CACNA2D3-209ENST00000478466 QSER1Q2KHR3 1735 aa17.18■□□□□ 0.34
CACNA2D3-209ENST00000478466 EMILIN1Q9Y6C2 1016 aa17.17■□□□□ 0.34
CACNA2D3-209ENST00000478466 LY75O60449 1722 aa17.16■□□□□ 0.34
CACNA2D3-209ENST00000478466 PPM1GO15355 546 aaPredicted RBP17.16■□□□□ 0.34
CACNA2D3-209ENST00000478466 C1QTNF8P60827 252 aa17.16■□□□□ 0.34
CACNA2D3-209ENST00000478466 NKX1-1Q15270 411 aaPredicted RBP17.16■□□□□ 0.34
CACNA2D3-209ENST00000478466 SPG7Q9UQ90 795 aa17.16■□□□□ 0.34
CACNA2D3-209ENST00000478466 DOT1LQ8TEK3 1739 aa17.16■□□□□ 0.34
CACNA2D3-209ENST00000478466 PALLDQ8WX93 1383 aa17.15■□□□□ 0.34
CACNA2D3-209ENST00000478466 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.15■□□□□ 0.34
CACNA2D3-209ENST00000478466 WASHC2AQ641Q2 1341 aa17.15■□□□□ 0.34
CACNA2D3-209ENST00000478466 COL24A1Q17RW2 1714 aa17.14■□□□□ 0.33
CACNA2D3-209ENST00000478466 MSL1Q68DK7 614 aa17.14■□□□□ 0.33
CACNA2D3-209ENST00000478466 PIGBQ92521 554 aa17.14■□□□□ 0.33
CACNA2D3-209ENST00000478466 CD2APQ9Y5K6 639 aa17.14■□□□□ 0.33
CACNA2D3-209ENST00000478466 SHANK3Q9BYB0 1731 aa17.13■□□□□ 0.33
CACNA2D3-209ENST00000478466 EYA1Q99502 592 aa17.13■□□□□ 0.33
CACNA2D3-209ENST00000478466 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
CACNA2D3-209ENST00000478466 AK7Q96M32 723 aa17.12■□□□□ 0.33
CACNA2D3-209ENST00000478466 YBX3P16989 372 aaKnown RBP eCLIP17.11■□□□□ 0.33
CACNA2D3-209ENST00000478466 POLKQ9UBT6 870 aa17.11■□□□□ 0.33
CACNA2D3-209ENST00000478466 SENP3-EIF4A1A0A087X0R7 540 aa17.1■□□□□ 0.33
CACNA2D3-209ENST00000478466 TUBGCP6Q96RT7 1819 aa17.1■□□□□ 0.33
CACNA2D3-209ENST00000478466 LOC102724428A0A0B4J2F2 783 aa17.09■□□□□ 0.33
CACNA2D3-209ENST00000478466 GIGYF1O75420 1035 aaPredicted RBP17.09■□□□□ 0.33
CACNA2D3-209ENST00000478466 SIK1P57059 783 aa17.09■□□□□ 0.33
CACNA2D3-209ENST00000478466 IFNL2Q8IZJ0 200 aa17.09■□□□□ 0.33
CACNA2D3-209ENST00000478466 TMOD3Q9NYL9 352 aa17.09■□□□□ 0.33
CACNA2D3-209ENST00000478466 NCAPD2Q15021 1401 aa17.08■□□□□ 0.32
CACNA2D3-209ENST00000478466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.08■□□□□ 0.32
CACNA2D3-209ENST00000478466 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
CACNA2D3-209ENST00000478466 SSFA2P28290 1259 aa17.07■□□□□ 0.32
CACNA2D3-209ENST00000478466 KIF20BQ96Q89 1820 aa17.07■□□□□ 0.32
CACNA2D3-209ENST00000478466 PHF14O94880 888 aa17.06■□□□□ 0.32
CACNA2D3-209ENST00000478466 PHKG2P15735 406 aa17.06■□□□□ 0.32
CACNA2D3-209ENST00000478466 ASAP1Q9ULH1 1129 aa17.06■□□□□ 0.32
CACNA2D3-209ENST00000478466 ATP6V1AP38606 617 aa17.05■□□□□ 0.32
CACNA2D3-209ENST00000478466 AMIGO3Q86WK7 504 aa17.05■□□□□ 0.32
CACNA2D3-209ENST00000478466 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
CACNA2D3-209ENST00000478466 TNNT2P45379 298 aaPredicted RBP17.04■□□□□ 0.32
CACNA2D3-209ENST00000478466 EIF4A2Q14240 407 aaKnown RBP17.04■□□□□ 0.32
CACNA2D3-209ENST00000478466 LINC00116Q8NCU8 138 aa17.04■□□□□ 0.32
CACNA2D3-209ENST00000478466 C5P01031 1676 aa17.04■□□□□ 0.32
CACNA2D3-209ENST00000478466 GOLGB1Q14789 3259 aaKnown RBP17.03■□□□□ 0.32
CACNA2D3-209ENST00000478466 ERVV-2B6SEH9 535 aa17.03■□□□□ 0.32
CACNA2D3-209ENST00000478466 SMIM5Q71RC9 77 aa17.03■□□□□ 0.32
CACNA2D3-209ENST00000478466 ATG3Q9NT62 314 aa17.03■□□□□ 0.32
CACNA2D3-209ENST00000478466 PLEKHG2Q9H7P9 1386 aa17.02■□□□□ 0.32
CACNA2D3-209ENST00000478466 GNPATO15228 680 aa17.02■□□□□ 0.32
CACNA2D3-209ENST00000478466 HSP90AB1P08238 724 aaKnown RBP17.02■□□□□ 0.32
CACNA2D3-209ENST00000478466 ITPK1Q13572 414 aa17.02■□□□□ 0.32
CACNA2D3-209ENST00000478466 MAP2P11137 1827 aaKnown RBP17.02■□□□□ 0.31
CACNA2D3-209ENST00000478466 ITGB4P16144 1822 aa17.02■□□□□ 0.31
CACNA2D3-209ENST00000478466 TAF1LQ8IZX4 1826 aa17.02■□□□□ 0.31
CACNA2D3-209ENST00000478466 EIF4G2P78344 907 aaKnown RBP eCLIP17.01■□□□□ 0.31
CACNA2D3-209ENST00000478466 PLEKHO1Q53GL0 409 aaPredicted RBP17.01■□□□□ 0.31
CACNA2D3-209ENST00000478466 PCGF6Q9BYE7 350 aa17.01■□□□□ 0.31
CACNA2D3-209ENST00000478466 C4BP0C0L5 1744 aa17.01■□□□□ 0.31
CACNA2D3-209ENST00000478466 PKD1L3Q7Z443 1732 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms