RNA–Protein interactions for RNA: ENST00000478264.1

PLOD3-213, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-213ENST00000478264 TNS2Q63HR2 1409 aa24.29■■□□□ 1.48
PLOD3-213ENST00000478264 HMOX1P09601 288 aa24.29■■□□□ 1.48
PLOD3-213ENST00000478264 CCDC184Q52MB2 194 aa24.28■■□□□ 1.48
PLOD3-213ENST00000478264 WDR43Q15061 677 aaKnown RBP eCLIP24.27■■□□□ 1.48
PLOD3-213ENST00000478264 DDB1Q16531 1140 aa24.27■■□□□ 1.48
PLOD3-213ENST00000478264 PKD1L3Q7Z443 1732 aa24.27■■□□□ 1.48
PLOD3-213ENST00000478264 CCER2I3L3R5 266 aa24.25■■□□□ 1.47
PLOD3-213ENST00000478264 FCHSD2O94868 740 aa24.24■■□□□ 1.47
PLOD3-213ENST00000478264 RSPH6AQ9H0K4 717 aa24.24■■□□□ 1.47
PLOD3-213ENST00000478264 EXOC5O00471 708 aa24.23■■□□□ 1.47
PLOD3-213ENST00000478264 MIER1Q8N108 512 aa24.23■■□□□ 1.47
PLOD3-213ENST00000478264 BRWD3Q6RI45 1802 aa24.23■■□□□ 1.47
PLOD3-213ENST00000478264 SHANK3Q9BYB0 1731 aa24.22■■□□□ 1.47
PLOD3-213ENST00000478264 ZCRB1Q8TBF4 217 aaKnown RBP24.22■■□□□ 1.47
PLOD3-213ENST00000478264 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.22■■□□□ 1.47
PLOD3-213ENST00000478264 PRKAR2BP31323 418 aa24.21■■□□□ 1.47
PLOD3-213ENST00000478264 SPG7Q9UQ90 795 aa24.21■■□□□ 1.47
PLOD3-213ENST00000478264 PDE3BQ13370 1112 aa24.2■■□□□ 1.46
PLOD3-213ENST00000478264 AMOTQ4VCS5 1084 aa24.2■■□□□ 1.46
PLOD3-213ENST00000478264 KRT27Q7Z3Y8 459 aa24.2■■□□□ 1.46
PLOD3-213ENST00000478264 PNNQ9H307 717 aaKnown RBP24.2■■□□□ 1.46
PLOD3-213ENST00000478264 PCDH11XQ9BZA7 1347 aa24.19■■□□□ 1.46
PLOD3-213ENST00000478264 PCDH11YQ9BZA8 1340 aa24.19■■□□□ 1.46
PLOD3-213ENST00000478264 PLEKHO1Q53GL0 409 aaPredicted RBP24.19■■□□□ 1.46
PLOD3-213ENST00000478264 PNISRQ8TF01 805 aaKnown RBP24.19■■□□□ 1.46
PLOD3-213ENST00000478264 ADAMTS8Q9UP79 889 aa24.18■■□□□ 1.46
PLOD3-213ENST00000478264 NEFMP07197 916 aa24.16■■□□□ 1.46
PLOD3-213ENST00000478264 PLEKHF1Q96S99 279 aa24.15■■□□□ 1.46
PLOD3-213ENST00000478264 MAPK8IP3Q9UPT6 1336 aa24.14■■□□□ 1.46
PLOD3-213ENST00000478264 MARCH10Q8NA82 808 aaPredicted RBP24.14■■□□□ 1.45
PLOD3-213ENST00000478264 DDX54Q8TDD1 881 aaKnown RBP24.14■■□□□ 1.45
PLOD3-213ENST00000478264 ZNF530Q6P9A1 599 aaPredicted RBP24.13■■□□□ 1.45
PLOD3-213ENST00000478264 GAS2L2Q8NHY3 880 aa24.13■■□□□ 1.45
PLOD3-213ENST00000478264 BCL9O00512 1426 aa24.12■■□□□ 1.45
PLOD3-213ENST00000478264 CYP27B1O15528 508 aa24.12■■□□□ 1.45
PLOD3-213ENST00000478264 MTHFSDQ2M296 383 aaKnown RBP24.12■■□□□ 1.45
PLOD3-213ENST00000478264 IFNL2Q8IZJ0 200 aa24.12■■□□□ 1.45
PLOD3-213ENST00000478264 PHACTR3Q96KR7 559 aa24.12■■□□□ 1.45
PLOD3-213ENST00000478264 PHKG2P15735 406 aa24.11■■□□□ 1.45
PLOD3-213ENST00000478264 C1orf141Q5JVX7 400 aa24.1■■□□□ 1.45
PLOD3-213ENST00000478264 RUNDC1Q96C34 613 aa24.1■■□□□ 1.45
PLOD3-213ENST00000478264 AKAP4Q5JQC9 854 aa24.09■■□□□ 1.45
PLOD3-213ENST00000478264 CCDC146Q8IYE0 955 aa24.09■■□□□ 1.45
PLOD3-213ENST00000478264 FAM9BQ8IZU0 186 aa24.09■■□□□ 1.45
PLOD3-213ENST00000478264 FAM182BQ5T319 152 aa24.08■■□□□ 1.45
PLOD3-213ENST00000478264 FAM196AQ6ZSG2 479 aa24.08■■□□□ 1.45
PLOD3-213ENST00000478264 HSP90AB1P08238 724 aaKnown RBP24.07■■□□□ 1.44
PLOD3-213ENST00000478264 NKX1-1Q15270 411 aaPredicted RBP24.07■■□□□ 1.44
PLOD3-213ENST00000478264 MAP3K5Q99683 1374 aa24.06■■□□□ 1.44
PLOD3-213ENST00000478264 DOT1LQ8TEK3 1739 aa24.05■■□□□ 1.44
PLOD3-213ENST00000478264 NFE2L2Q16236 605 aa24.04■■□□□ 1.44
PLOD3-213ENST00000478264 EP400Q96L91 3159 aa24.04■■□□□ 1.44
PLOD3-213ENST00000478264 GNAT3A8MTJ3 354 aa24.03■■□□□ 1.44
PLOD3-213ENST00000478264 DCAF5Q96JK2 942 aa24.03■■□□□ 1.44
PLOD3-213ENST00000478264 TOGARAM1Q9Y4F4 1720 aa24.03■■□□□ 1.44
PLOD3-213ENST00000478264 KDM6AO15550 1401 aaPredicted RBP24.02■■□□□ 1.44
PLOD3-213ENST00000478264 NHSQ6T4R5 1651 aa24.02■■□□□ 1.44
PLOD3-213ENST00000478264 ADAMTS7Q9UKP4 1686 aa24.02■■□□□ 1.44
PLOD3-213ENST00000478264 SBF2Q86WG5 1849 aa24■■□□□ 1.43
PLOD3-213ENST00000478264 TMPOP42166 694 aaKnown RBP24■■□□□ 1.43
PLOD3-213ENST00000478264 SCN11AQ9UI33 1791 aa23.99■■□□□ 1.43
PLOD3-213ENST00000478264 HTATSF1O43719 755 aaKnown RBP23.99■■□□□ 1.43
PLOD3-213ENST00000478264 MPRIPQ6WCQ1 1025 aa23.99■■□□□ 1.43
PLOD3-213ENST00000478264 DLG5Q8TDM6 1919 aa23.99■■□□□ 1.43
PLOD3-213ENST00000478264 APAF1O14727 1248 aa23.98■■□□□ 1.43
PLOD3-213ENST00000478264 RTF1Q92541 710 aaKnown RBP23.98■■□□□ 1.43
PLOD3-213ENST00000478264 ACSBG1Q96GR2 724 aa23.98■■□□□ 1.43
PLOD3-213ENST00000478264 MRC1P22897 1456 aa23.97■■□□□ 1.43
PLOD3-213ENST00000478264 RIPK4P57078 832 aa23.97■■□□□ 1.43
PLOD3-213ENST00000478264 LMOD3Q0VAK6 560 aa23.97■■□□□ 1.43
PLOD3-213ENST00000478264 VIRMAQ69YN4 1812 aaKnown RBP23.96■■□□□ 1.43
PLOD3-213ENST00000478264 ERVV-2B6SEH9 535 aa23.96■■□□□ 1.43
PLOD3-213ENST00000478264 RNMTO43148 476 aaKnown RBP23.96■■□□□ 1.43
PLOD3-213ENST00000478264 RRP7AQ9Y3A4 280 aaKnown RBP23.96■■□□□ 1.43
PLOD3-213ENST00000478264 CEMIPQ8WUJ3 1361 aa23.95■■□□□ 1.42
PLOD3-213ENST00000478264 TNS1Q9HBL0 1735 aaKnown RBP23.94■■□□□ 1.42
PLOD3-213ENST00000478264 TRIM37O94972 964 aa23.94■■□□□ 1.42
PLOD3-213ENST00000478264 PRIM1P49642 420 aaKnown RBP23.94■■□□□ 1.42
PLOD3-213ENST00000478264 NEUROD2Q15784 382 aa23.94■■□□□ 1.42
PLOD3-213ENST00000478264 SYTL4Q96C24 671 aaPredicted RBP23.94■■□□□ 1.42
PLOD3-213ENST00000478264 BCL11BQ9C0K0 894 aaPredicted RBP23.94■■□□□ 1.42
PLOD3-213ENST00000478264 LGR6Q9HBX8 967 aa23.94■■□□□ 1.42
PLOD3-213ENST00000478264 ITGB4P16144 1822 aa23.94■■□□□ 1.42
PLOD3-213ENST00000478264 KCNQ2O43526 872 aa23.93■■□□□ 1.42
PLOD3-213ENST00000478264 IL17REQ8NFR9 667 aa23.93■■□□□ 1.42
PLOD3-213ENST00000478264 CABP4P57796 275 aa23.92■■□□□ 1.42
PLOD3-213ENST00000478264 NCBP3Q53F19 620 aaKnown RBP23.92■■□□□ 1.42
PLOD3-213ENST00000478264 MCM10Q7L590 875 aa23.92■■□□□ 1.42
PLOD3-213ENST00000478264 TMOD3Q9NYL9 352 aa23.92■■□□□ 1.42
PLOD3-213ENST00000478264 SLC52A2Q9HAB3 445 aa23.91■■□□□ 1.42
PLOD3-213ENST00000478264 BTAF1O14981 1849 aa23.9■■□□□ 1.42
PLOD3-213ENST00000478264 TEFQ10587 303 aa23.9■■□□□ 1.42
PLOD3-213ENST00000478264 DCTN1Q14203 1278 aa23.9■■□□□ 1.42
PLOD3-213ENST00000478264 CCDC125Q86Z20 511 aa23.9■■□□□ 1.42
PLOD3-213ENST00000478264 TRIM35Q9UPQ4 493 aa23.89■■□□□ 1.41
PLOD3-213ENST00000478264 SIPA1L3O60292 1781 aaPredicted RBP23.88■■□□□ 1.41
PLOD3-213ENST00000478264 SF3B2Q13435 895 aaKnown RBP23.88■■□□□ 1.41
PLOD3-213ENST00000478264 CCDC27Q2M243 656 aa23.88■■□□□ 1.41
PLOD3-213ENST00000478264 PTF1AQ7RTS3 328 aa23.88■■□□□ 1.41
PLOD3-213ENST00000478264 NGEFQ8N5V2 710 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms