RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 TNS2Q63HR2 1409 aa26.65■■□□□ 1.86
ACTB-210ENST00000477812 RAPGEF4Q8WZA2 1011 aa26.64■■□□□ 1.86
ACTB-210ENST00000477812 SHANK3Q9BYB0 1731 aa26.63■■□□□ 1.85
ACTB-210ENST00000477812 SEPT12Q8IYM1 358 aa26.63■■□□□ 1.85
ACTB-210ENST00000477812 FCHSD2O94868 740 aa26.62■■□□□ 1.85
ACTB-210ENST00000477812 TATP17735 454 aaPredicted RBP26.61■■□□□ 1.85
ACTB-210ENST00000477812 WDR43Q15061 677 aaKnown RBP eCLIP26.6■■□□□ 1.85
ACTB-210ENST00000477812 ADAMTS8Q9UP79 889 aa26.6■■□□□ 1.85
ACTB-210ENST00000477812 PRKAR2BP31323 418 aa26.59■■□□□ 1.85
ACTB-210ENST00000477812 BRWD3Q6RI45 1802 aa26.59■■□□□ 1.85
ACTB-210ENST00000477812 PLEKHF1Q96S99 279 aa26.58■■□□□ 1.85
ACTB-210ENST00000477812 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.58■■□□□ 1.85
ACTB-210ENST00000477812 DDB1Q16531 1140 aa26.56■■□□□ 1.84
ACTB-210ENST00000477812 A0A0G2JS52 829 aa26.55■■□□□ 1.84
ACTB-210ENST00000477812 MYT1Q01538 1121 aa26.55■■□□□ 1.84
ACTB-210ENST00000477812 ZCRB1Q8TBF4 217 aaKnown RBP26.55■■□□□ 1.84
ACTB-210ENST00000477812 PHACTR3Q96KR7 559 aa26.54■■□□□ 1.84
ACTB-210ENST00000477812 EXOC5O00471 708 aa26.53■■□□□ 1.84
ACTB-210ENST00000477812 AMOTQ4VCS5 1084 aa26.52■■□□□ 1.84
ACTB-210ENST00000477812 PCDH11XQ9BZA7 1347 aa26.51■■□□□ 1.83
ACTB-210ENST00000477812 PCDH11YQ9BZA8 1340 aa26.51■■□□□ 1.83
ACTB-210ENST00000477812 CYP27B1O15528 508 aa26.51■■□□□ 1.83
ACTB-210ENST00000477812 PLEKHO1Q53GL0 409 aaPredicted RBP26.51■■□□□ 1.83
ACTB-210ENST00000477812 MARCH10Q8NA82 808 aaPredicted RBP26.51■■□□□ 1.83
ACTB-210ENST00000477812 SPG7Q9UQ90 795 aa26.51■■□□□ 1.83
ACTB-210ENST00000477812 MTHFSDQ2M296 383 aaKnown RBP26.5■■□□□ 1.83
ACTB-210ENST00000477812 KRT27Q7Z3Y8 459 aa26.49■■□□□ 1.83
ACTB-210ENST00000477812 PNNQ9H307 717 aaKnown RBP26.49■■□□□ 1.83
ACTB-210ENST00000477812 CCDC146Q8IYE0 955 aa26.48■■□□□ 1.83
ACTB-210ENST00000477812 BCL9O00512 1426 aa26.48■■□□□ 1.83
ACTB-210ENST00000477812 PDE3BQ13370 1112 aa26.47■■□□□ 1.83
ACTB-210ENST00000477812 PHKG2P15735 406 aa26.46■■□□□ 1.83
ACTB-210ENST00000477812 ZNF530Q6P9A1 599 aaPredicted RBP26.46■■□□□ 1.83
ACTB-210ENST00000477812 FAM9BQ8IZU0 186 aa26.46■■□□□ 1.83
ACTB-210ENST00000477812 RUNDC1Q96C34 613 aa26.46■■□□□ 1.83
ACTB-210ENST00000477812 EP400Q96L91 3159 aa26.46■■□□□ 1.83
ACTB-210ENST00000477812 DDX54Q8TDD1 881 aaKnown RBP26.45■■□□□ 1.82
ACTB-210ENST00000477812 NKX1-1Q15270 411 aaPredicted RBP26.44■■□□□ 1.82
ACTB-210ENST00000477812 GAS2L2Q8NHY3 880 aa26.44■■□□□ 1.82
ACTB-210ENST00000477812 ADAMTS7Q9UKP4 1686 aa26.44■■□□□ 1.82
ACTB-210ENST00000477812 MAPK8IP3Q9UPT6 1336 aa26.43■■□□□ 1.82
ACTB-210ENST00000477812 FAM182BQ5T319 152 aa26.43■■□□□ 1.82
ACTB-210ENST00000477812 IFNL2Q8IZJ0 200 aa26.43■■□□□ 1.82
ACTB-210ENST00000477812 KDM6AO15550 1401 aaPredicted RBP26.42■■□□□ 1.82
ACTB-210ENST00000477812 NFE2L2Q16236 605 aa26.41■■□□□ 1.82
ACTB-210ENST00000477812 AKAP4Q5JQC9 854 aa26.41■■□□□ 1.82
ACTB-210ENST00000477812 TOGARAM1Q9Y4F4 1720 aa26.41■■□□□ 1.82
ACTB-210ENST00000477812 MAP3K5Q99683 1374 aa26.41■■□□□ 1.82
ACTB-210ENST00000477812 NEFMP07197 916 aa26.39■■□□□ 1.82
ACTB-210ENST00000477812 C1orf141Q5JVX7 400 aa26.39■■□□□ 1.82
ACTB-210ENST00000477812 ILDR2Q71H61 639 aa26.39■■□□□ 1.82
ACTB-210ENST00000477812 DLG5Q8TDM6 1919 aa26.39■■□□□ 1.81
ACTB-210ENST00000477812 TMPOP42166 694 aaKnown RBP26.38■■□□□ 1.81
ACTB-210ENST00000477812 DOT1LQ8TEK3 1739 aa26.37■■□□□ 1.81
ACTB-210ENST00000477812 APAF1O14727 1248 aa26.37■■□□□ 1.81
ACTB-210ENST00000477812 FAM196AQ6ZSG2 479 aa26.36■■□□□ 1.81
ACTB-210ENST00000477812 SBF2Q86WG5 1849 aa26.36■■□□□ 1.81
ACTB-210ENST00000477812 SCN11AQ9UI33 1791 aa26.35■■□□□ 1.81
ACTB-210ENST00000477812 GNAT3A8MTJ3 354 aa26.35■■□□□ 1.81
ACTB-210ENST00000477812 HSP90AB1P08238 724 aaKnown RBP26.35■■□□□ 1.81
ACTB-210ENST00000477812 DCAF5Q96JK2 942 aa26.35■■□□□ 1.81
ACTB-210ENST00000477812 MRC1P22897 1456 aa26.35■■□□□ 1.81
ACTB-210ENST00000477812 NHSQ6T4R5 1651 aa26.34■■□□□ 1.81
ACTB-210ENST00000477812 MPRIPQ6WCQ1 1025 aa26.34■■□□□ 1.81
ACTB-210ENST00000477812 RRP7AQ9Y3A4 280 aaKnown RBP26.34■■□□□ 1.81
ACTB-210ENST00000477812 CEMIPQ8WUJ3 1361 aa26.33■■□□□ 1.81
ACTB-210ENST00000477812 VIRMAQ69YN4 1812 aaKnown RBP26.32■■□□□ 1.8
ACTB-210ENST00000477812 HTATSF1O43719 755 aaKnown RBP26.32■■□□□ 1.8
ACTB-210ENST00000477812 IL17REQ8NFR9 667 aa26.32■■□□□ 1.8
ACTB-210ENST00000477812 RNMTO43148 476 aaKnown RBP26.31■■□□□ 1.8
ACTB-210ENST00000477812 RIPK4P57078 832 aa26.31■■□□□ 1.8
ACTB-210ENST00000477812 LGR6Q9HBX8 967 aa26.31■■□□□ 1.8
ACTB-210ENST00000477812 TRIM35Q9UPQ4 493 aa26.3■■□□□ 1.8
ACTB-210ENST00000477812 NCBP3Q53F19 620 aaKnown RBP26.29■■□□□ 1.8
ACTB-210ENST00000477812 ITGB4P16144 1822 aa26.29■■□□□ 1.8
ACTB-210ENST00000477812 ERVV-2B6SEH9 535 aa26.28■■□□□ 1.8
ACTB-210ENST00000477812 KCNQ2O43526 872 aa26.28■■□□□ 1.8
ACTB-210ENST00000477812 PTF1AQ7RTS3 328 aa26.28■■□□□ 1.8
ACTB-210ENST00000477812 ACSBG1Q96GR2 724 aa26.28■■□□□ 1.8
ACTB-210ENST00000477812 PRIM1P49642 420 aaKnown RBP26.27■■□□□ 1.8
ACTB-210ENST00000477812 DCTN1Q14203 1278 aa26.27■■□□□ 1.8
ACTB-210ENST00000477812 MCM10Q7L590 875 aa26.27■■□□□ 1.8
ACTB-210ENST00000477812 SIPA1L3O60292 1781 aaPredicted RBP26.27■■□□□ 1.8
ACTB-210ENST00000477812 TNS1Q9HBL0 1735 aaKnown RBP26.26■■□□□ 1.79
ACTB-210ENST00000477812 SENP3-EIF4A1A0A087X0R7 540 aa26.26■■□□□ 1.79
ACTB-210ENST00000477812 NEUROD2Q15784 382 aa26.26■■□□□ 1.79
ACTB-210ENST00000477812 RTF1Q92541 710 aaKnown RBP26.26■■□□□ 1.79
ACTB-210ENST00000477812 LMOD3Q0VAK6 560 aa26.25■■□□□ 1.79
ACTB-210ENST00000477812 TRIM37O94972 964 aa26.24■■□□□ 1.79
ACTB-210ENST00000477812 CCDC27Q2M243 656 aa26.24■■□□□ 1.79
ACTB-210ENST00000477812 THUMPD2Q9BTF0 503 aaKnown RBP26.24■■□□□ 1.79
ACTB-210ENST00000477812 BCL11BQ9C0K0 894 aaPredicted RBP26.24■■□□□ 1.79
ACTB-210ENST00000477812 SLC52A2Q9HAB3 445 aa26.24■■□□□ 1.79
ACTB-210ENST00000477812 BTAF1O14981 1849 aa26.23■■□□□ 1.79
ACTB-210ENST00000477812 PIGBQ92521 554 aa26.22■■□□□ 1.79
ACTB-210ENST00000477812 CABP4P57796 275 aa26.21■■□□□ 1.79
ACTB-210ENST00000477812 NGEFQ8N5V2 710 aa26.21■■□□□ 1.79
ACTB-210ENST00000477812 PAPPAQ13219 1627 aa26.21■■□□□ 1.79
ACTB-210ENST00000477812 NFATC2IPQ8NCF5 419 aa26.2■■□□□ 1.78
ACTB-210ENST00000477812 SYTL4Q96C24 671 aaPredicted RBP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms