RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TBC1D2Q9BYX2 928 aa15.55■□□□□ 0.08
RTFDC1-207ENST00000477573 ROBO2Q9HCK4 1378 aa15.55■□□□□ 0.08
RTFDC1-207ENST00000477573 KIF20BQ96Q89 1820 aa15.55■□□□□ 0.08
RTFDC1-207ENST00000477573 TRIM6-TRIM34B2RNG4 842 aa15.55■□□□□ 0.08
RTFDC1-207ENST00000477573 HSP90AB1P08238 724 aaKnown RBP15.55■□□□□ 0.08
RTFDC1-207ENST00000477573 GOLGA2Q08379 1002 aa15.55■□□□□ 0.08
RTFDC1-207ENST00000477573 CCDC146Q8IYE0 955 aa15.55■□□□□ 0.08
RTFDC1-207ENST00000477573 CDCA7LQ96GN5 454 aa15.55■□□□□ 0.08
RTFDC1-207ENST00000477573 SLC26A8Q96RN1 970 aa15.55■□□□□ 0.08
RTFDC1-207ENST00000477573 TRIM34Q9BYJ4 488 aa15.55■□□□□ 0.08
RTFDC1-207ENST00000477573 CEP170BQ9Y4F5 1589 aaPredicted RBP15.55■□□□□ 0.08
RTFDC1-207ENST00000477573 SHPRHQ149N8 1683 aa15.54■□□□□ 0.08
RTFDC1-207ENST00000477573 ADGRB2O60241 1585 aa15.54■□□□□ 0.08
RTFDC1-207ENST00000477573 TICAM2Q86XR7 235 aa15.54■□□□□ 0.08
RTFDC1-207ENST00000477573 APAF1O14727 1248 aa15.53■□□□□ 0.08
RTFDC1-207ENST00000477573 UPF2Q9HAU5 1272 aaKnown RBP15.53■□□□□ 0.08
RTFDC1-207ENST00000477573 EDC4Q6P2E9 1401 aaKnown RBP15.53■□□□□ 0.08
RTFDC1-207ENST00000477573 ZNF521Q96K83 1311 aa15.53■□□□□ 0.08
RTFDC1-207ENST00000477573 OGFRQ9NZT2 677 aa15.53■□□□□ 0.08
RTFDC1-207ENST00000477573 CPSF1Q10570 1443 aaKnown RBP15.53■□□□□ 0.08
RTFDC1-207ENST00000477573 CAPN2P17655 700 aa15.52■□□□□ 0.08
RTFDC1-207ENST00000477573 ZNF692Q9BU19 519 aaPredicted RBP15.52■□□□□ 0.08
RTFDC1-207ENST00000477573 MFAP1P55081 439 aaKnown RBP15.52■□□□□ 0.07
RTFDC1-207ENST00000477573 CREBRFQ8IUR6 639 aa15.52■□□□□ 0.07
RTFDC1-207ENST00000477573 PDCL2Q8N4E4 241 aa15.52■□□□□ 0.07
RTFDC1-207ENST00000477573 RUNDC1Q96C34 613 aa15.52■□□□□ 0.07
RTFDC1-207ENST00000477573 AMOTL2Q9Y2J4 779 aa15.52■□□□□ 0.07
RTFDC1-207ENST00000477573 PTCH1Q13635 1447 aa15.51■□□□□ 0.07
RTFDC1-207ENST00000477573 CDC42BPGQ6DT37 1551 aa15.51■□□□□ 0.07
RTFDC1-207ENST00000477573 ADAMTSL3P82987 1691 aa15.51■□□□□ 0.07
RTFDC1-207ENST00000477573 GBP4Q96PP9 640 aa15.51■□□□□ 0.07
RTFDC1-207ENST00000477573 CCDC39Q9UFE4 941 aa15.51■□□□□ 0.07
RTFDC1-207ENST00000477573 SETD1BQ9UPS6 1966 aaKnown RBP15.5■□□□□ 0.07
RTFDC1-207ENST00000477573 PIK3R4Q99570 1358 aa15.5■□□□□ 0.07
RTFDC1-207ENST00000477573 CTR9Q6PD62 1173 aa15.5■□□□□ 0.07
RTFDC1-207ENST00000477573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.5■□□□□ 0.07
RTFDC1-207ENST00000477573 PTPRUQ92729 1446 aa15.5■□□□□ 0.07
RTFDC1-207ENST00000477573 TBC1D32Q96NH3 1257 aa15.49■□□□□ 0.07
RTFDC1-207ENST00000477573 MAPK8IP3Q9UPT6 1336 aa15.49■□□□□ 0.07
RTFDC1-207ENST00000477573 ITSN1Q15811 1721 aa15.49■□□□□ 0.07
RTFDC1-207ENST00000477573 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.49■□□□□ 0.07
RTFDC1-207ENST00000477573 ANKLE2Q86XL3 938 aa15.48■□□□□ 0.07
RTFDC1-207ENST00000477573 ZNF142P52746 1687 aaPredicted RBP15.48■□□□□ 0.07
RTFDC1-207ENST00000477573 SLFN14P0C7P3 912 aa15.48■□□□□ 0.07
RTFDC1-207ENST00000477573 U2AF1L5P0DN76 240 aaPredicted RBP15.48■□□□□ 0.07
RTFDC1-207ENST00000477573 U2AF1Q01081 240 aaKnown RBP eCLIP15.48■□□□□ 0.07
RTFDC1-207ENST00000477573 SLFN5Q08AF3 891 aa15.48■□□□□ 0.07
RTFDC1-207ENST00000477573 DUSP27Q5VZP5 1158 aa15.48■□□□□ 0.07
RTFDC1-207ENST00000477573 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.48■□□□□ 0.07
RTFDC1-207ENST00000477573 MON2Q7Z3U7 1717 aa15.47■□□□□ 0.07
RTFDC1-207ENST00000477573 AKAP12Q02952 1782 aa15.47■□□□□ 0.07
RTFDC1-207ENST00000477573 LMOD3Q0VAK6 560 aa15.47■□□□□ 0.07
RTFDC1-207ENST00000477573 MYCBPQ99417 103 aaPredicted RBP15.47■□□□□ 0.07
RTFDC1-207ENST00000477573 EGFL6Q8IUX8 553 aa15.46■□□□□ 0.07
RTFDC1-207ENST00000477573 CIZ1Q9ULV3 898 aaPredicted RBP15.46■□□□□ 0.07
RTFDC1-207ENST00000477573 CCDC9Q9Y3X0 531 aaKnown RBP15.46■□□□□ 0.07
RTFDC1-207ENST00000477573 NBPF20Q3BBV1 942 aa15.46■□□□□ 0.07
RTFDC1-207ENST00000477573 NCOA3Q9Y6Q9 1424 aa15.46■□□□□ 0.06
RTFDC1-207ENST00000477573 TRMT2AQ8IZ69 625 aaKnown RBP15.45■□□□□ 0.06
RTFDC1-207ENST00000477573 TCP11L2Q8N4U5 519 aa15.45■□□□□ 0.06
RTFDC1-207ENST00000477573 PRR36Q9H6K5 1346 aa15.45■□□□□ 0.06
RTFDC1-207ENST00000477573 PNPLA6Q8IY17 1366 aa15.45■□□□□ 0.06
RTFDC1-207ENST00000477573 PLEKHG3A1L390 1219 aa15.45■□□□□ 0.06
RTFDC1-207ENST00000477573 SPDYE4A6NLX3 237 aa15.45■□□□□ 0.06
RTFDC1-207ENST00000477573 DIAPH1O60610 1272 aaKnown RBP15.45■□□□□ 0.06
RTFDC1-207ENST00000477573 KIAA2012Q0VF49 1180 aa15.45■□□□□ 0.06
RTFDC1-207ENST00000477573 COG3Q96JB2 828 aa15.45■□□□□ 0.06
RTFDC1-207ENST00000477573 XRN1Q8IZH2 1706 aaKnown RBP15.44■□□□□ 0.06
RTFDC1-207ENST00000477573 ZNF445P59923 1031 aa15.44■□□□□ 0.06
RTFDC1-207ENST00000477573 ANKRD7Q92527 254 aa15.44■□□□□ 0.06
RTFDC1-207ENST00000477573 COL3A1P02461 1466 aaPredicted RBP15.44■□□□□ 0.06
RTFDC1-207ENST00000477573 TOPAZ1Q8N9V7 1692 aa15.44■□□□□ 0.06
RTFDC1-207ENST00000477573 U2SURPO15042 1029 aaKnown RBP15.43■□□□□ 0.06
RTFDC1-207ENST00000477573 CCDC27Q2M243 656 aa15.43■□□□□ 0.06
RTFDC1-207ENST00000477573 BANK1Q8NDB2 785 aa15.43■□□□□ 0.06
RTFDC1-207ENST00000477573 NCAPGQ9BPX3 1015 aa15.43■□□□□ 0.06
RTFDC1-207ENST00000477573 FEZ2Q9UHY8 353 aaPredicted RBP15.43■□□□□ 0.06
RTFDC1-207ENST00000477573 IQSEC2Q5JU85 1478 aa15.43■□□□□ 0.06
RTFDC1-207ENST00000477573 AATKQ6ZMQ8 1374 aa15.43■□□□□ 0.06
RTFDC1-207ENST00000477573 NKTRP30414 1462 aaKnown RBP15.42■□□□□ 0.06
RTFDC1-207ENST00000477573 TMED8Q6PL24 325 aaPredicted RBP15.42■□□□□ 0.06
RTFDC1-207ENST00000477573 WDR63Q8IWG1 891 aa15.42■□□□□ 0.06
RTFDC1-207ENST00000477573 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.42■□□□□ 0.06
RTFDC1-207ENST00000477573 PLCD4Q9BRC7 762 aa15.42■□□□□ 0.06
RTFDC1-207ENST00000477573 NCKAP5LQ9HCH0 1330 aa15.42■□□□□ 0.06
RTFDC1-207ENST00000477573 LOC102724159A0A0B4J2E5 919 aa15.42■□□□□ 0.06
RTFDC1-207ENST00000477573 IGSF3O75054 1194 aa15.42■□□□□ 0.06
RTFDC1-207ENST00000477573 CLSTN1O94985 981 aa15.42■□□□□ 0.06
RTFDC1-207ENST00000477573 BRPF1P55201 1214 aaPredicted RBP15.42■□□□□ 0.06
RTFDC1-207ENST00000477573 PWP2Q15269 919 aaKnown RBP15.42■□□□□ 0.06
RTFDC1-207ENST00000477573 NME9Q86XW9 330 aa15.42■□□□□ 0.06
RTFDC1-207ENST00000477573 BCL2L12Q9HB09 334 aa15.42■□□□□ 0.06
RTFDC1-207ENST00000477573 BRMS1Q9HCU9 246 aa15.42■□□□□ 0.06
RTFDC1-207ENST00000477573 DDIT3P35638 169 aa15.41■□□□□ 0.06
RTFDC1-207ENST00000477573 TNNT3P45378 269 aaPredicted RBP15.41■□□□□ 0.06
RTFDC1-207ENST00000477573 TERF2Q15554 542 aa15.41■□□□□ 0.06
RTFDC1-207ENST00000477573 HSP90AB3PQ58FF7 597 aa15.41■□□□□ 0.06
RTFDC1-207ENST00000477573 CHMP4CQ96CF2 233 aa15.41■□□□□ 0.06
RTFDC1-207ENST00000477573 POLKQ9UBT6 870 aa15.41■□□□□ 0.06
RTFDC1-207ENST00000477573 CEP83Q9Y592 693 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms