RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 NEFMP07197 916 aa21.46■■□□□ 1.03
VHL-203ENST00000477538 IL2RBP14784 551 aa21.46■■□□□ 1.03
VHL-203ENST00000477538 TATP17735 454 aaPredicted RBP21.46■■□□□ 1.03
VHL-203ENST00000477538 RUNDC1Q96C34 613 aa21.46■■□□□ 1.03
VHL-203ENST00000477538 GJD4Q96KN9 370 aaPredicted RBP21.46■■□□□ 1.03
VHL-203ENST00000477538 MAPK8IP3Q9UPT6 1336 aa21.46■■□□□ 1.03
VHL-203ENST00000477538 BRWD3Q6RI45 1802 aa21.45■■□□□ 1.03
VHL-203ENST00000477538 KAT6BQ8WYB5 2073 aa21.45■■□□□ 1.02
VHL-203ENST00000477538 BARGINQ6ZT62 677 aa21.45■■□□□ 1.02
VHL-203ENST00000477538 PLEKHG2Q9H7P9 1386 aa21.45■■□□□ 1.02
VHL-203ENST00000477538 CDCA7Q9BWT1 371 aaPredicted RBP21.43■■□□□ 1.02
VHL-203ENST00000477538 RGS17Q9UGC6 210 aaPredicted RBP21.43■■□□□ 1.02
VHL-203ENST00000477538 FAM98CQ17RN3 349 aaKnown RBP21.42■■□□□ 1.02
VHL-203ENST00000477538 PHACTR3Q96KR7 559 aa21.42■■□□□ 1.02
VHL-203ENST00000477538 SCN11AQ9UI33 1791 aa21.41■■□□□ 1.02
VHL-203ENST00000477538 TNS2Q63HR2 1409 aa21.4■■□□□ 1.02
VHL-203ENST00000477538 PLEKHO1Q53GL0 409 aaPredicted RBP21.4■■□□□ 1.02
VHL-203ENST00000477538 AMOTQ4VCS5 1084 aa21.39■■□□□ 1.01
VHL-203ENST00000477538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.39■■□□□ 1.01
VHL-203ENST00000477538 SPG7Q9UQ90 795 aa21.39■■□□□ 1.01
VHL-203ENST00000477538 APAF1O14727 1248 aa21.38■■□□□ 1.01
VHL-203ENST00000477538 RBM6P78332 1123 aaKnown RBP21.38■■□□□ 1.01
VHL-203ENST00000477538 MTHFSDQ2M296 383 aaKnown RBP21.38■■□□□ 1.01
VHL-203ENST00000477538 A0A0G2JS52 829 aa21.37■■□□□ 1.01
VHL-203ENST00000477538 MYT1Q01538 1121 aa21.37■■□□□ 1.01
VHL-203ENST00000477538 GAS2L2Q8NHY3 880 aa21.37■■□□□ 1.01
VHL-203ENST00000477538 ZCRB1Q8TBF4 217 aaKnown RBP21.37■■□□□ 1.01
VHL-203ENST00000477538 TMPOP42166 694 aaKnown RBP21.36■■□□□ 1.01
VHL-203ENST00000477538 NFE2L2Q16236 605 aa21.36■■□□□ 1.01
VHL-203ENST00000477538 ZNF530Q6P9A1 599 aaPredicted RBP21.36■■□□□ 1.01
VHL-203ENST00000477538 POTEAQ6S8J7 498 aa21.36■■□□□ 1.01
VHL-203ENST00000477538 PCDH11XQ9BZA7 1347 aa21.35■■□□□ 1.01
VHL-203ENST00000477538 PCDH11YQ9BZA8 1340 aa21.35■■□□□ 1.01
VHL-203ENST00000477538 ADAMTS7Q9UKP4 1686 aa21.35■■□□□ 1.01
VHL-203ENST00000477538 ITGB4P16144 1822 aa21.35■■□□□ 1.01
VHL-203ENST00000477538 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
VHL-203ENST00000477538 EXOC5O00471 708 aa21.35■■□□□ 1.01
VHL-203ENST00000477538 ONECUT3O60422 494 aaPredicted RBP21.35■■□□□ 1.01
VHL-203ENST00000477538 DDB1Q16531 1140 aa21.35■■□□□ 1.01
VHL-203ENST00000477538 RRP7AQ9Y3A4 280 aaKnown RBP21.35■■□□□ 1.01
VHL-203ENST00000477538 RXRBP28702 533 aa21.34■■□□□ 1.01
VHL-203ENST00000477538 DOT1LQ8TEK3 1739 aa21.33■■□□□ 1.01
VHL-203ENST00000477538 TOGARAM1Q9Y4F4 1720 aa21.33■■□□□ 1.01
VHL-203ENST00000477538 NEUROD2Q15784 382 aa21.33■■□□□ 1.01
VHL-203ENST00000477538 C1orf141Q5JVX7 400 aa21.33■■□□□ 1.01
VHL-203ENST00000477538 MAP3K5Q99683 1374 aa21.33■■□□□ 1
VHL-203ENST00000477538 SBF2Q86WG5 1849 aa21.32■■□□□ 1
VHL-203ENST00000477538 RIPK4P57078 832 aa21.32■■□□□ 1
VHL-203ENST00000477538 SEPT12Q8IYM1 358 aa21.32■■□□□ 1
VHL-203ENST00000477538 SIPA1L3O60292 1781 aaPredicted RBP21.32■■□□□ 1
VHL-203ENST00000477538 CYP27B1O15528 508 aa21.31■■□□□ 1
VHL-203ENST00000477538 HNRNPUQ00839 825 aaKnown RBP eCLIP21.31■■□□□ 1
VHL-203ENST00000477538 AKAP4Q5JQC9 854 aa21.31■■□□□ 1
VHL-203ENST00000477538 IFNL2Q8IZJ0 200 aa21.31■■□□□ 1
VHL-203ENST00000477538 PHKG2P15735 406 aa21.3■■□□□ 1
VHL-203ENST00000477538 DDX54Q8TDD1 881 aaKnown RBP21.3■■□□□ 1
VHL-203ENST00000477538 RGS12O14924 1447 aa21.29■■□□□ 1
VHL-203ENST00000477538 GNAT3A8MTJ3 354 aa21.29■■□□□ 1
VHL-203ENST00000477538 NGEFQ8N5V2 710 aa21.29■■□□□ 1
VHL-203ENST00000477538 SALL2Q9Y467 1007 aaPredicted RBP21.29■■□□□ 1
VHL-203ENST00000477538 LMOD3Q0VAK6 560 aa21.28■■□□□ 1
VHL-203ENST00000477538 PDE3BQ13370 1112 aa21.27■■□□□ 1
VHL-203ENST00000477538 NCBP3Q53F19 620 aaKnown RBP21.27■■□□□ 1
VHL-203ENST00000477538 YTHDC1Q96MU7 727 aaKnown RBP21.27■■□□□ 1
VHL-203ENST00000477538 HTATSF1O43719 755 aaKnown RBP21.26■□□□□ 0.99
VHL-203ENST00000477538 HSP90AB1P08238 724 aaKnown RBP21.26■□□□□ 0.99
VHL-203ENST00000477538 RTF1Q92541 710 aaKnown RBP21.26■□□□□ 0.99
VHL-203ENST00000477538 TRIM35Q9UPQ4 493 aa21.26■□□□□ 0.99
VHL-203ENST00000477538 KDM6AO15550 1401 aaPredicted RBP21.26■□□□□ 0.99
VHL-203ENST00000477538 CCDC27Q2M243 656 aa21.25■□□□□ 0.99
VHL-203ENST00000477538 MARCH10Q8NA82 808 aaPredicted RBP21.25■□□□□ 0.99
VHL-203ENST00000477538 NKX1-1Q15270 411 aaPredicted RBP21.24■□□□□ 0.99
VHL-203ENST00000477538 MPRIPQ6WCQ1 1025 aa21.24■□□□□ 0.99
VHL-203ENST00000477538 MCM10Q7L590 875 aa21.24■□□□□ 0.99
VHL-203ENST00000477538 DCTN1Q14203 1278 aa21.23■□□□□ 0.99
VHL-203ENST00000477538 DCAF5Q96JK2 942 aa21.23■□□□□ 0.99
VHL-203ENST00000477538 NHSQ6T4R5 1651 aa21.22■□□□□ 0.99
VHL-203ENST00000477538 MRC1P22897 1456 aa21.22■□□□□ 0.99
VHL-203ENST00000477538 RNMTO43148 476 aaKnown RBP21.22■□□□□ 0.99
VHL-203ENST00000477538 KRT27Q7Z3Y8 459 aa21.22■□□□□ 0.99
VHL-203ENST00000477538 WWC1Q8IX03 1113 aa21.22■□□□□ 0.99
VHL-203ENST00000477538 IL17REQ8NFR9 667 aa21.22■□□□□ 0.99
VHL-203ENST00000477538 LGR6Q9HBX8 967 aa21.22■□□□□ 0.99
VHL-203ENST00000477538 CEMIPQ8WUJ3 1361 aa21.22■□□□□ 0.99
VHL-203ENST00000477538 KDM3BQ7LBC6 1761 aa21.21■□□□□ 0.99
VHL-203ENST00000477538 THUMPD2Q9BTF0 503 aaKnown RBP21.21■□□□□ 0.99
VHL-203ENST00000477538 ZBED9Q6R2W3 1325 aa21.21■□□□□ 0.99
VHL-203ENST00000477538 ZNF521Q96K83 1311 aa21.2■□□□□ 0.98
VHL-203ENST00000477538 BTAF1O14981 1849 aa21.2■□□□□ 0.98
VHL-203ENST00000477538 FAM182BQ5T319 152 aa21.18■□□□□ 0.98
VHL-203ENST00000477538 BCL9O00512 1426 aa21.18■□□□□ 0.98
VHL-203ENST00000477538 PAPPAQ13219 1627 aa21.18■□□□□ 0.98
VHL-203ENST00000477538 TEFQ10587 303 aa21.17■□□□□ 0.98
VHL-203ENST00000477538 ERVV-2B6SEH9 535 aa21.16■□□□□ 0.98
VHL-203ENST00000477538 CALD1Q05682 793 aaKnown RBP21.16■□□□□ 0.98
VHL-203ENST00000477538 WDR63Q8IWG1 891 aa21.16■□□□□ 0.98
VHL-203ENST00000477538 UBR2Q8IWV8 1755 aa21.15■□□□□ 0.98
VHL-203ENST00000477538 CABP4P57796 275 aa21.14■□□□□ 0.97
VHL-203ENST00000477538 SLC52A2Q9HAB3 445 aa21.14■□□□□ 0.97
VHL-203ENST00000477538 IL16Q14005 1332 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms