RNA–Protein interactions for RNA: ENST00000477434.5

PDZRN3-206, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-206ENST00000477434 TTLL8A6PVC2 850 aa7.8□□□□□ -1.16
PDZRN3-206ENST00000477434 ATP5J2-PTCD1G3V325 749 aa7.8□□□□□ -1.16
PDZRN3-206ENST00000477434 MAN1A2O60476 641 aa7.8□□□□□ -1.16
PDZRN3-206ENST00000477434 SCTRP47872 440 aa7.8□□□□□ -1.16
PDZRN3-206ENST00000477434 CYP2U1Q7Z449 544 aa7.8□□□□□ -1.16
PDZRN3-206ENST00000477434 PROSER2Q86WR7 435 aaPredicted RBP7.8□□□□□ -1.16
PDZRN3-206ENST00000477434 ESF1Q9H501 851 aaKnown RBP7.8□□□□□ -1.16
PDZRN3-206ENST00000477434 A6NJR5 290 aa7.79□□□□□ -1.16
PDZRN3-206ENST00000477434 TRAK2O60296 914 aa7.79□□□□□ -1.16
PDZRN3-206ENST00000477434 MYCP01106 439 aaPredicted RBP7.79□□□□□ -1.16
PDZRN3-206ENST00000477434 FNBP4Q8N3X1 1017 aaPredicted RBP7.79□□□□□ -1.16
PDZRN3-206ENST00000477434 CDCA7Q9BWT1 371 aaPredicted RBP7.79□□□□□ -1.16
PDZRN3-206ENST00000477434 ZNF395Q9H8N7 513 aaPredicted RBP7.79□□□□□ -1.16
PDZRN3-206ENST00000477434 DOLKQ9UPQ8 538 aa7.79□□□□□ -1.16
PDZRN3-206ENST00000477434 SOBPA7XYQ1 873 aa7.78□□□□□ -1.16
PDZRN3-206ENST00000477434 POM121CA8CG34 1229 aa7.78□□□□□ -1.16
PDZRN3-206ENST00000477434 USP4Q13107 963 aa7.78□□□□□ -1.16
PDZRN3-206ENST00000477434 MAP7D1Q3KQU3 841 aa7.78□□□□□ -1.16
PDZRN3-206ENST00000477434 TSGA10IPQ3SY00 556 aa7.78□□□□□ -1.16
PDZRN3-206ENST00000477434 INSM2Q96T92 566 aaPredicted RBP7.78□□□□□ -1.16
PDZRN3-206ENST00000477434 OSBPL3Q9H4L5 887 aa7.78□□□□□ -1.16
PDZRN3-206ENST00000477434 DNMT3LQ9UJW3 386 aa7.78□□□□□ -1.16
PDZRN3-206ENST00000477434 CTSOP43234 321 aaPredicted RBP7.77□□□□□ -1.17
PDZRN3-206ENST00000477434 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.77□□□□□ -1.17
PDZRN3-206ENST00000477434 NPAS3Q8IXF0 933 aa7.77□□□□□ -1.17
PDZRN3-206ENST00000477434 POLMQ9NP87 494 aaPredicted RBP7.77□□□□□ -1.17
PDZRN3-206ENST00000477434 NXF1Q9UBU9 619 aaKnown RBP7.77□□□□□ -1.17
PDZRN3-206ENST00000477434 TERTO14746 1132 aaKnown RBP7.76□□□□□ -1.17
PDZRN3-206ENST00000477434 PLPP7Q8NBV4 271 aa7.76□□□□□ -1.17
PDZRN3-206ENST00000477434 NFATC2IPQ8NCF5 419 aa7.76□□□□□ -1.17
PDZRN3-206ENST00000477434 SIRT1Q96EB6 747 aa7.76□□□□□ -1.17
PDZRN3-206ENST00000477434 A0A1W2PRU2 124 aa7.75□□□□□ -1.17
PDZRN3-206ENST00000477434 GNRH1P01148 92 aa7.75□□□□□ -1.17
PDZRN3-206ENST00000477434 NFX1Q12986 1120 aaKnown RBP7.75□□□□□ -1.17
PDZRN3-206ENST00000477434 TREML4Q6UXN2 200 aa7.75□□□□□ -1.17
PDZRN3-206ENST00000477434 RNF217Q8TC41 542 aa7.75□□□□□ -1.17
PDZRN3-206ENST00000477434 ADAMTS19Q8TE59 1207 aa7.75□□□□□ -1.17
PDZRN3-206ENST00000477434 FIGNL2A6NMB9 653 aa7.74□□□□□ -1.17
PDZRN3-206ENST00000477434 PIK3CDO00329 1044 aa7.74□□□□□ -1.17
PDZRN3-206ENST00000477434 GPC1P35052 558 aa7.74□□□□□ -1.17
PDZRN3-206ENST00000477434 RNF144AP50876 292 aaPredicted RBP7.74□□□□□ -1.17
PDZRN3-206ENST00000477434 CLN3Q13286 438 aa7.74□□□□□ -1.17
PDZRN3-206ENST00000477434 OXLD1Q5BKU9 147 aa7.74□□□□□ -1.17
PDZRN3-206ENST00000477434 HDGFL1Q5TGJ6 251 aa7.74□□□□□ -1.17
PDZRN3-206ENST00000477434 FOXD4L5Q5VV16 416 aaPredicted RBP7.74□□□□□ -1.17
PDZRN3-206ENST00000477434 LZTS3O60299 673 aaPredicted RBP7.73□□□□□ -1.17
PDZRN3-206ENST00000477434 ARHGEF10LQ9HCE6 1279 aa7.73□□□□□ -1.17
PDZRN3-206ENST00000477434 MEN1O00255 615 aa7.72□□□□□ -1.17
PDZRN3-206ENST00000477434 WFS1O76024 890 aa7.72□□□□□ -1.17
PDZRN3-206ENST00000477434 SKIP12755 728 aa7.72□□□□□ -1.17
PDZRN3-206ENST00000477434 LCE2AQ5TA79 106 aaPredicted RBP7.72□□□□□ -1.17
PDZRN3-206ENST00000477434 SLC16A10Q8TF71 515 aa7.72□□□□□ -1.17
PDZRN3-206ENST00000477434 NLRP3Q96P20 1036 aa7.72□□□□□ -1.17
PDZRN3-206ENST00000477434 H3BM21 787 aa7.71□□□□□ -1.18
PDZRN3-206ENST00000477434 PTSQ03393 145 aa7.71□□□□□ -1.18
PDZRN3-206ENST00000477434 ESCO1Q5FWF5 840 aa7.71□□□□□ -1.18
PDZRN3-206ENST00000477434 LYSMD3Q7Z3D4 306 aa7.71□□□□□ -1.18
PDZRN3-206ENST00000477434 GLMNQ92990 594 aa7.71□□□□□ -1.18
PDZRN3-206ENST00000477434 GTF3C3Q9Y5Q9 886 aa7.71□□□□□ -1.18
PDZRN3-206ENST00000477434 EML3Q32P44 896 aa7.7□□□□□ -1.18
PDZRN3-206ENST00000477434 UCN2Q96RP3 112 aa7.7□□□□□ -1.18
PDZRN3-206ENST00000477434 ESYT1Q9BSJ8 1104 aa7.7□□□□□ -1.18
PDZRN3-206ENST00000477434 RAB6BQ9NRW1 208 aa7.7□□□□□ -1.18
PDZRN3-206ENST00000477434 USP17L5A8MUK1 530 aa7.69□□□□□ -1.18
PDZRN3-206ENST00000477434 PPFIA3O75145 1194 aa7.69□□□□□ -1.18
PDZRN3-206ENST00000477434 IL2RAP01589 272 aa7.69□□□□□ -1.18
PDZRN3-206ENST00000477434 SLC27A3Q5K4L6 730 aa7.69□□□□□ -1.18
PDZRN3-206ENST00000477434 CNKSR1Q969H4 720 aa7.69□□□□□ -1.18
PDZRN3-206ENST00000477434 XAGE2Q96GT9 111 aa7.69□□□□□ -1.18
PDZRN3-206ENST00000477434 GRIP2Q9C0E4 1043 aa7.69□□□□□ -1.18
PDZRN3-206ENST00000477434 SLC35F4A4IF30 521 aa7.68□□□□□ -1.18
PDZRN3-206ENST00000477434 VEGFBP49765 207 aa7.68□□□□□ -1.18
PDZRN3-206ENST00000477434 NCOA4Q13772 614 aa7.68□□□□□ -1.18
PDZRN3-206ENST00000477434 PRICKLE2Q7Z3G6 844 aa7.68□□□□□ -1.18
PDZRN3-206ENST00000477434 PLEKHM2Q8IWE5 1019 aa7.68□□□□□ -1.18
PDZRN3-206ENST00000477434 IRF7Q92985 503 aa7.68□□□□□ -1.18
PDZRN3-206ENST00000477434 NOD1Q9Y239 953 aa7.68□□□□□ -1.18
PDZRN3-206ENST00000477434 HRH3Q9Y5N1 445 aa7.68□□□□□ -1.18
PDZRN3-206ENST00000477434 ATP9BO43861 1147 aa7.67□□□□□ -1.18
PDZRN3-206ENST00000477434 CENPCQ03188 943 aa7.67□□□□□ -1.18
PDZRN3-206ENST00000477434 TBC1D9Q6ZT07 1266 aa7.67□□□□□ -1.18
PDZRN3-206ENST00000477434 CCDC155Q8N6L0 562 aa7.67□□□□□ -1.18
PDZRN3-206ENST00000477434 CALR3Q96L12 384 aaKnown RBP7.67□□□□□ -1.18
PDZRN3-206ENST00000477434 ETNK1Q9HBU6 452 aa7.67□□□□□ -1.18
PDZRN3-206ENST00000477434 SPATA31C2B4DYI2 1134 aa7.66□□□□□ -1.18
PDZRN3-206ENST00000477434 WASLO00401 505 aaPredicted RBP7.66□□□□□ -1.18
PDZRN3-206ENST00000477434 VSIG8P0DPA2 414 aa7.66□□□□□ -1.18
PDZRN3-206ENST00000477434 SCNN1DP51172 638 aa7.66□□□□□ -1.18
PDZRN3-206ENST00000477434 LCE2CQ5TA81 110 aa7.66□□□□□ -1.18
PDZRN3-206ENST00000477434 PCDHGA11Q9Y5H2 935 aa7.66□□□□□ -1.18
PDZRN3-206ENST00000477434 ERCC6Q03468 1493 aa7.66□□□□□ -1.18
PDZRN3-206ENST00000477434 SENP3-EIF4A1A0A087X0R7 540 aa7.65□□□□□ -1.18
PDZRN3-206ENST00000477434 USP17L3A6NCW0 530 aa7.65□□□□□ -1.18
PDZRN3-206ENST00000477434 USP17L4A6NCW7 530 aa7.65□□□□□ -1.18
PDZRN3-206ENST00000477434 INHAP05111 366 aa7.65□□□□□ -1.18
PDZRN3-206ENST00000477434 GDF10P55107 478 aa7.65□□□□□ -1.18
PDZRN3-206ENST00000477434 WDR44Q5JSH3 913 aa7.65□□□□□ -1.18
PDZRN3-206ENST00000477434 USP17L2Q6R6M4 530 aa7.65□□□□□ -1.18
PDZRN3-206ENST00000477434 USP17L1Q7RTZ2 530 aa7.65□□□□□ -1.18
PDZRN3-206ENST00000477434 DEPDC4Q8N2C3 294 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms