RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 PLEKHG2Q9H7P9 1386 aa17.73■□□□□ 0.43
HLA-DPA1-246ENST00000476642 EXOC5O00471 708 aa17.72■□□□□ 0.43
HLA-DPA1-246ENST00000476642 ANP32CO43423 234 aa17.72■□□□□ 0.43
HLA-DPA1-246ENST00000476642 EYA1Q99502 592 aa17.72■□□□□ 0.43
HLA-DPA1-246ENST00000476642 PRKRIP1Q9H875 184 aaPredicted RBP17.72■□□□□ 0.43
HLA-DPA1-246ENST00000476642 NUDCQ9Y266 331 aa17.72■□□□□ 0.43
HLA-DPA1-246ENST00000476642 TNS1Q9HBL0 1735 aaKnown RBP17.72■□□□□ 0.43
HLA-DPA1-246ENST00000476642 NCAPD2Q15021 1401 aa17.72■□□□□ 0.43
HLA-DPA1-246ENST00000476642 TATP17735 454 aaPredicted RBP17.71■□□□□ 0.43
HLA-DPA1-246ENST00000476642 IL13P35225 146 aa17.71■□□□□ 0.43
HLA-DPA1-246ENST00000476642 LRRC37A3O60309 1634 aa17.71■□□□□ 0.43
HLA-DPA1-246ENST00000476642 IGSF1Q8N6C5 1336 aa17.71■□□□□ 0.42
HLA-DPA1-246ENST00000476642 TNS2Q63HR2 1409 aa17.69■□□□□ 0.42
HLA-DPA1-246ENST00000476642 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
HLA-DPA1-246ENST00000476642 USHBP1Q8N6Y0 703 aa17.68■□□□□ 0.42
HLA-DPA1-246ENST00000476642 OVOS2A0A0G2JMS6 1433 aa17.67■□□□□ 0.42
HLA-DPA1-246ENST00000476642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.66■□□□□ 0.42
HLA-DPA1-246ENST00000476642 KDRP35968 1356 aa17.66■□□□□ 0.42
HLA-DPA1-246ENST00000476642 U2SURPO15042 1029 aaKnown RBP17.65■□□□□ 0.42
HLA-DPA1-246ENST00000476642 SULT6B1Q6IMI4 303 aa17.65■□□□□ 0.42
HLA-DPA1-246ENST00000476642 ZCRB1Q8TBF4 217 aaKnown RBP17.65■□□□□ 0.42
HLA-DPA1-246ENST00000476642 SPG7Q9UQ90 795 aa17.65■□□□□ 0.42
HLA-DPA1-246ENST00000476642 MEGF6O75095 1541 aa17.65■□□□□ 0.42
HLA-DPA1-246ENST00000476642 PKD1L3Q7Z443 1732 aa17.64■□□□□ 0.41
HLA-DPA1-246ENST00000476642 AMOTQ4VCS5 1084 aa17.63■□□□□ 0.41
HLA-DPA1-246ENST00000476642 PNNQ9H307 717 aaKnown RBP17.63■□□□□ 0.41
HLA-DPA1-246ENST00000476642 PCDH11XQ9BZA7 1347 aa17.63■□□□□ 0.41
HLA-DPA1-246ENST00000476642 PCDH11YQ9BZA8 1340 aa17.63■□□□□ 0.41
HLA-DPA1-246ENST00000476642 PLEKHO1Q53GL0 409 aaPredicted RBP17.62■□□□□ 0.41
HLA-DPA1-246ENST00000476642 PPP1R1BQ9UD71 204 aaPredicted RBP17.62■□□□□ 0.41
HLA-DPA1-246ENST00000476642 BCL9O00512 1426 aa17.62■□□□□ 0.41
HLA-DPA1-246ENST00000476642 NEFMP07197 916 aa17.61■□□□□ 0.41
HLA-DPA1-246ENST00000476642 U2AF1L5P0DN76 240 aaPredicted RBP17.61■□□□□ 0.41
HLA-DPA1-246ENST00000476642 U2AF1Q01081 240 aaKnown RBP eCLIP17.61■□□□□ 0.41
HLA-DPA1-246ENST00000476642 PLSCR1O15162 318 aa17.6■□□□□ 0.41
HLA-DPA1-246ENST00000476642 BCL11BQ9C0K0 894 aaPredicted RBP17.6■□□□□ 0.41
HLA-DPA1-246ENST00000476642 SPON1Q9HCB6 807 aa17.6■□□□□ 0.41
HLA-DPA1-246ENST00000476642 SHANK3Q9BYB0 1731 aa17.59■□□□□ 0.41
HLA-DPA1-246ENST00000476642 RREB1Q92766 1687 aa17.59■□□□□ 0.41
HLA-DPA1-246ENST00000476642 FCHSD2O94868 740 aa17.59■□□□□ 0.41
HLA-DPA1-246ENST00000476642 HMOX1P09601 288 aa17.59■□□□□ 0.41
HLA-DPA1-246ENST00000476642 MARCH10Q8NA82 808 aaPredicted RBP17.59■□□□□ 0.41
HLA-DPA1-246ENST00000476642 DDX54Q8TDD1 881 aaKnown RBP17.59■□□□□ 0.41
HLA-DPA1-246ENST00000476642 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
HLA-DPA1-246ENST00000476642 AEBP1Q8IUX7 1158 aa17.58■□□□□ 0.4
HLA-DPA1-246ENST00000476642 NUP188Q5SRE5 1749 aa17.58■□□□□ 0.4
HLA-DPA1-246ENST00000476642 KCNQ2O43526 872 aa17.57■□□□□ 0.4
HLA-DPA1-246ENST00000476642 HSP90AB1P08238 724 aaKnown RBP17.57■□□□□ 0.4
HLA-DPA1-246ENST00000476642 WDR43Q15061 677 aaKnown RBP eCLIP17.57■□□□□ 0.4
HLA-DPA1-246ENST00000476642 IFNL2Q8IZJ0 200 aa17.57■□□□□ 0.4
HLA-DPA1-246ENST00000476642 SBF2Q86WG5 1849 aa17.56■□□□□ 0.4
HLA-DPA1-246ENST00000476642 C1orf141Q5JVX7 400 aa17.56■□□□□ 0.4
HLA-DPA1-246ENST00000476642 GAS2L2Q8NHY3 880 aa17.54■□□□□ 0.4
HLA-DPA1-246ENST00000476642 RSPH6AQ9H0K4 717 aa17.54■□□□□ 0.4
HLA-DPA1-246ENST00000476642 KAT6BQ8WYB5 2073 aa17.53■□□□□ 0.4
HLA-DPA1-246ENST00000476642 PRKAR2BP31323 418 aa17.53■□□□□ 0.4
HLA-DPA1-246ENST00000476642 NKX1-1Q15270 411 aaPredicted RBP17.53■□□□□ 0.4
HLA-DPA1-246ENST00000476642 DIEXFQ68CQ4 756 aaKnown RBP17.53■□□□□ 0.4
HLA-DPA1-246ENST00000476642 ZNF530Q6P9A1 599 aaPredicted RBP17.53■□□□□ 0.4
HLA-DPA1-246ENST00000476642 PTF1AQ7RTS3 328 aa17.53■□□□□ 0.4
HLA-DPA1-246ENST00000476642 STK32BQ9NY57 414 aa17.53■□□□□ 0.4
HLA-DPA1-246ENST00000476642 NHSQ6T4R5 1651 aa17.52■□□□□ 0.4
HLA-DPA1-246ENST00000476642 CYP27B1O15528 508 aa17.52■□□□□ 0.4
HLA-DPA1-246ENST00000476642 PHKG2P15735 406 aa17.52■□□□□ 0.4
HLA-DPA1-246ENST00000476642 MAPK8IP3Q9UPT6 1336 aa17.51■□□□□ 0.39
HLA-DPA1-246ENST00000476642 AKAP4Q5JQC9 854 aa17.51■□□□□ 0.39
HLA-DPA1-246ENST00000476642 DOT1LQ8TEK3 1739 aa17.51■□□□□ 0.39
HLA-DPA1-246ENST00000476642 DCAF5Q96JK2 942 aa17.51■□□□□ 0.39
HLA-DPA1-246ENST00000476642 ANO8Q9HCE9 1232 aaPredicted RBP17.51■□□□□ 0.39
HLA-DPA1-246ENST00000476642 MRS2Q9HD23 443 aa17.51■□□□□ 0.39
HLA-DPA1-246ENST00000476642 TXNRD1Q16881 649 aa17.5■□□□□ 0.39
HLA-DPA1-246ENST00000476642 RGPD3A6NKT7 1758 aaPredicted RBP17.49■□□□□ 0.39
HLA-DPA1-246ENST00000476642 RGPD4Q7Z3J3 1758 aa17.49■□□□□ 0.39
HLA-DPA1-246ENST00000476642 MTHFSDQ2M296 383 aaKnown RBP17.48■□□□□ 0.39
HLA-DPA1-246ENST00000476642 PROM2Q8N271 834 aa17.48■□□□□ 0.39
HLA-DPA1-246ENST00000476642 ACSBG1Q96GR2 724 aa17.48■□□□□ 0.39
HLA-DPA1-246ENST00000476642 ERVV-2B6SEH9 535 aa17.47■□□□□ 0.39
HLA-DPA1-246ENST00000476642 ZBTB7AO95365 584 aa17.47■□□□□ 0.39
HLA-DPA1-246ENST00000476642 YY1P25490 414 aa17.47■□□□□ 0.39
HLA-DPA1-246ENST00000476642 SYTL4Q96C24 671 aaPredicted RBP17.47■□□□□ 0.39
HLA-DPA1-246ENST00000476642 SCN11AQ9UI33 1791 aa17.46■□□□□ 0.39
HLA-DPA1-246ENST00000476642 GNAT3A8MTJ3 354 aa17.46■□□□□ 0.39
HLA-DPA1-246ENST00000476642 SLC15A2Q16348 729 aa17.46■□□□□ 0.39
HLA-DPA1-246ENST00000476642 ITGB4P16144 1822 aa17.46■□□□□ 0.39
HLA-DPA1-246ENST00000476642 VIRMAQ69YN4 1812 aaKnown RBP17.46■□□□□ 0.39
HLA-DPA1-246ENST00000476642 MAP3K5Q99683 1374 aa17.45■□□□□ 0.38
HLA-DPA1-246ENST00000476642 CCER2I3L3R5 266 aa17.45■□□□□ 0.38
HLA-DPA1-246ENST00000476642 HMGB2P26583 209 aaKnown RBP17.45■□□□□ 0.38
HLA-DPA1-246ENST00000476642 PRIM1P49642 420 aaKnown RBP17.45■□□□□ 0.38
HLA-DPA1-246ENST00000476642 RTF1Q92541 710 aaKnown RBP17.45■□□□□ 0.38
HLA-DPA1-246ENST00000476642 RUNDC1Q96C34 613 aa17.45■□□□□ 0.38
HLA-DPA1-246ENST00000476642 PHACTR3Q96KR7 559 aa17.45■□□□□ 0.38
HLA-DPA1-246ENST00000476642 PLEKHF1Q96S99 279 aa17.45■□□□□ 0.38
HLA-DPA1-246ENST00000476642 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
HLA-DPA1-246ENST00000476642 BTAF1O14981 1849 aa17.44■□□□□ 0.38
HLA-DPA1-246ENST00000476642 HTATSF1O43719 755 aaKnown RBP17.44■□□□□ 0.38
HLA-DPA1-246ENST00000476642 TMOD3Q9NYL9 352 aa17.44■□□□□ 0.38
HLA-DPA1-246ENST00000476642 ATF5Q9Y2D1 282 aaPredicted RBP17.44■□□□□ 0.38
HLA-DPA1-246ENST00000476642 TOGARAM1Q9Y4F4 1720 aa17.44■□□□□ 0.38
HLA-DPA1-246ENST00000476642 PNISRQ8TF01 805 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms