RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 PKD1L3Q7Z443 1732 aa17.45■□□□□ 0.38
PSMB4-204ENST00000476467 TRPC5Q9UL62 973 aaPredicted RBP17.45■□□□□ 0.38
PSMB4-204ENST00000476467 IL2RBP14784 551 aa17.44■□□□□ 0.38
PSMB4-204ENST00000476467 PHACTR3Q96KR7 559 aa17.44■□□□□ 0.38
PSMB4-204ENST00000476467 APAF1O14727 1248 aa17.44■□□□□ 0.38
PSMB4-204ENST00000476467 GLI3P10071 1580 aa17.43■□□□□ 0.38
PSMB4-204ENST00000476467 ZNF772Q68DY9 489 aaPredicted RBP17.43■□□□□ 0.38
PSMB4-204ENST00000476467 BARGINQ6ZT62 677 aa17.43■□□□□ 0.38
PSMB4-204ENST00000476467 CDCA7Q9BWT1 371 aaPredicted RBP17.43■□□□□ 0.38
PSMB4-204ENST00000476467 FKBP8Q14318 412 aa17.42■□□□□ 0.38
PSMB4-204ENST00000476467 NFE2L2Q16236 605 aa17.42■□□□□ 0.38
PSMB4-204ENST00000476467 AMOTQ4VCS5 1084 aa17.42■□□□□ 0.38
PSMB4-204ENST00000476467 PLEKHO1Q53GL0 409 aaPredicted RBP17.42■□□□□ 0.38
PSMB4-204ENST00000476467 GAS2L2Q8NHY3 880 aa17.42■□□□□ 0.38
PSMB4-204ENST00000476467 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.42■□□□□ 0.38
PSMB4-204ENST00000476467 TMPOP42166 694 aaKnown RBP17.41■□□□□ 0.38
PSMB4-204ENST00000476467 GJD4Q96KN9 370 aaPredicted RBP17.41■□□□□ 0.38
PSMB4-204ENST00000476467 MTHFSDQ2M296 383 aaKnown RBP17.41■□□□□ 0.38
PSMB4-204ENST00000476467 NGEFQ8N5V2 710 aa17.41■□□□□ 0.38
PSMB4-204ENST00000476467 DLG5Q8TDM6 1919 aa17.4■□□□□ 0.38
PSMB4-204ENST00000476467 QTRT2Q9H974 415 aaKnown RBP17.4■□□□□ 0.38
PSMB4-204ENST00000476467 SPG7Q9UQ90 795 aa17.4■□□□□ 0.38
PSMB4-204ENST00000476467 THSD7AQ9UPZ6 1657 aa17.4■□□□□ 0.38
PSMB4-204ENST00000476467 NCBP3Q53F19 620 aaKnown RBP17.4■□□□□ 0.38
PSMB4-204ENST00000476467 SHANK3Q9BYB0 1731 aa17.39■□□□□ 0.38
PSMB4-204ENST00000476467 LRRC37A3O60309 1634 aa17.39■□□□□ 0.37
PSMB4-204ENST00000476467 TNS2Q63HR2 1409 aa17.39■□□□□ 0.37
PSMB4-204ENST00000476467 RRP7AQ9Y3A4 280 aaKnown RBP17.39■□□□□ 0.37
PSMB4-204ENST00000476467 ZNF530Q6P9A1 599 aaPredicted RBP17.38■□□□□ 0.37
PSMB4-204ENST00000476467 SENP3-EIF4A1A0A087X0R7 540 aa17.38■□□□□ 0.37
PSMB4-204ENST00000476467 NEFLP07196 543 aa17.38■□□□□ 0.37
PSMB4-204ENST00000476467 FAM98CQ17RN3 349 aaKnown RBP17.38■□□□□ 0.37
PSMB4-204ENST00000476467 ZCRB1Q8TBF4 217 aaKnown RBP17.38■□□□□ 0.37
PSMB4-204ENST00000476467 MAP3K5Q99683 1374 aa17.37■□□□□ 0.37
PSMB4-204ENST00000476467 RIPK4P57078 832 aa17.37■□□□□ 0.37
PSMB4-204ENST00000476467 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
PSMB4-204ENST00000476467 PCDH11XQ9BZA7 1347 aa17.37■□□□□ 0.37
PSMB4-204ENST00000476467 PCDH11YQ9BZA8 1340 aa17.37■□□□□ 0.37
PSMB4-204ENST00000476467 NEUROD2Q15784 382 aa17.36■□□□□ 0.37
PSMB4-204ENST00000476467 LMOD3Q0VAK6 560 aa17.36■□□□□ 0.37
PSMB4-204ENST00000476467 CCDC27Q2M243 656 aa17.35■□□□□ 0.37
PSMB4-204ENST00000476467 AKAP4Q5JQC9 854 aa17.35■□□□□ 0.37
PSMB4-204ENST00000476467 C1orf141Q5JVX7 400 aa17.35■□□□□ 0.37
PSMB4-204ENST00000476467 ZBED9Q6R2W3 1325 aa17.35■□□□□ 0.37
PSMB4-204ENST00000476467 RGS17Q9UGC6 210 aaPredicted RBP17.35■□□□□ 0.37
PSMB4-204ENST00000476467 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
PSMB4-204ENST00000476467 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
PSMB4-204ENST00000476467 EXOC5O00471 708 aa17.34■□□□□ 0.37
PSMB4-204ENST00000476467 RBM6P78332 1123 aaKnown RBP17.34■□□□□ 0.37
PSMB4-204ENST00000476467 CYP27B1O15528 508 aa17.33■□□□□ 0.37
PSMB4-204ENST00000476467 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.37
PSMB4-204ENST00000476467 ONECUT3O60422 494 aaPredicted RBP17.33■□□□□ 0.37
PSMB4-204ENST00000476467 PHKG2P15735 406 aa17.33■□□□□ 0.37
PSMB4-204ENST00000476467 DDB1Q16531 1140 aa17.33■□□□□ 0.37
PSMB4-204ENST00000476467 IFNL2Q8IZJ0 200 aa17.33■□□□□ 0.37
PSMB4-204ENST00000476467 TRIM35Q9UPQ4 493 aa17.33■□□□□ 0.37
PSMB4-204ENST00000476467 ADAMTS7Q9UKP4 1686 aa17.33■□□□□ 0.36
PSMB4-204ENST00000476467 RTF1Q92541 710 aaKnown RBP17.32■□□□□ 0.36
PSMB4-204ENST00000476467 ZNF521Q96K83 1311 aa17.32■□□□□ 0.36
PSMB4-204ENST00000476467 A0A0G2JS52 829 aa17.32■□□□□ 0.36
PSMB4-204ENST00000476467 MYT1Q01538 1121 aa17.32■□□□□ 0.36
PSMB4-204ENST00000476467 WWC1Q8IX03 1113 aa17.32■□□□□ 0.36
PSMB4-204ENST00000476467 VIRMAQ69YN4 1812 aaKnown RBP17.31■□□□□ 0.36
PSMB4-204ENST00000476467 HSP90AB1P08238 724 aaKnown RBP17.3■□□□□ 0.36
PSMB4-204ENST00000476467 DDX54Q8TDD1 881 aaKnown RBP17.3■□□□□ 0.36
PSMB4-204ENST00000476467 SCN11AQ9UI33 1791 aa17.3■□□□□ 0.36
PSMB4-204ENST00000476467 POTEAQ6S8J7 498 aa17.3■□□□□ 0.36
PSMB4-204ENST00000476467 KDM6AO15550 1401 aaPredicted RBP17.3■□□□□ 0.36
PSMB4-204ENST00000476467 RXRBP28702 533 aa17.29■□□□□ 0.36
PSMB4-204ENST00000476467 SEPT12Q8IYM1 358 aa17.29■□□□□ 0.36
PSMB4-204ENST00000476467 CEMIPQ8WUJ3 1361 aa17.29■□□□□ 0.36
PSMB4-204ENST00000476467 NKX1-1Q15270 411 aaPredicted RBP17.28■□□□□ 0.36
PSMB4-204ENST00000476467 MCM10Q7L590 875 aa17.28■□□□□ 0.36
PSMB4-204ENST00000476467 DCAF5Q96JK2 942 aa17.28■□□□□ 0.36
PSMB4-204ENST00000476467 DCTN1Q14203 1278 aa17.28■□□□□ 0.36
PSMB4-204ENST00000476467 WDR63Q8IWG1 891 aa17.28■□□□□ 0.36
PSMB4-204ENST00000476467 RNMTO43148 476 aaKnown RBP17.27■□□□□ 0.36
PSMB4-204ENST00000476467 CALD1Q05682 793 aaKnown RBP17.27■□□□□ 0.36
PSMB4-204ENST00000476467 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
PSMB4-204ENST00000476467 IL17REQ8NFR9 667 aa17.27■□□□□ 0.36
PSMB4-204ENST00000476467 THUMPD2Q9BTF0 503 aaKnown RBP17.27■□□□□ 0.36
PSMB4-204ENST00000476467 MRC1P22897 1456 aa17.27■□□□□ 0.35
PSMB4-204ENST00000476467 TOGARAM1Q9Y4F4 1720 aa17.26■□□□□ 0.35
PSMB4-204ENST00000476467 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
PSMB4-204ENST00000476467 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
PSMB4-204ENST00000476467 MARCH10Q8NA82 808 aaPredicted RBP17.26■□□□□ 0.35
PSMB4-204ENST00000476467 LGR6Q9HBX8 967 aa17.26■□□□□ 0.35
PSMB4-204ENST00000476467 IL16Q14005 1332 aa17.26■□□□□ 0.35
PSMB4-204ENST00000476467 RGS12O14924 1447 aa17.25■□□□□ 0.35
PSMB4-204ENST00000476467 GOLGA2Q08379 1002 aa17.25■□□□□ 0.35
PSMB4-204ENST00000476467 SIPA1L3O60292 1781 aaPredicted RBP17.24■□□□□ 0.35
PSMB4-204ENST00000476467 DOT1LQ8TEK3 1739 aa17.24■□□□□ 0.35
PSMB4-204ENST00000476467 TEFQ10587 303 aa17.23■□□□□ 0.35
PSMB4-204ENST00000476467 ERVV-2B6SEH9 535 aa17.22■□□□□ 0.35
PSMB4-204ENST00000476467 BCL9O00512 1426 aa17.22■□□□□ 0.35
PSMB4-204ENST00000476467 IFT57Q9NWB7 429 aa17.22■□□□□ 0.35
PSMB4-204ENST00000476467 E9PSI1 815 aa17.21■□□□□ 0.35
PSMB4-204ENST00000476467 SLC52A2Q9HAB3 445 aa17.21■□□□□ 0.35
PSMB4-204ENST00000476467 ITGB4P16144 1822 aa17.21■□□□□ 0.34
PSMB4-204ENST00000476467 GNAI1P63096 354 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms