RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 KCNA4P22459 653 aa12.79□□□□□ -0.36
ABCF1-205ENST00000475993 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
ABCF1-205ENST00000475993 PLEKHM2Q8IWE5 1019 aa12.79□□□□□ -0.36
ABCF1-205ENST00000475993 PLEKHF1Q96S99 279 aa12.79□□□□□ -0.36
ABCF1-205ENST00000475993 ANKRD36BQ8N2N9 1353 aa12.79□□□□□ -0.36
ABCF1-205ENST00000475993 TMPOP42166 694 aaKnown RBP12.78□□□□□ -0.36
ABCF1-205ENST00000475993 KIAA1524Q8TCG1 905 aa12.78□□□□□ -0.36
ABCF1-205ENST00000475993 PIK3R4Q99570 1358 aa12.78□□□□□ -0.36
ABCF1-205ENST00000475993 CHAF1AQ13111 956 aaPredicted RBP12.78□□□□□ -0.36
ABCF1-205ENST00000475993 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
ABCF1-205ENST00000475993 TTC22Q5TAA0 569 aa12.77□□□□□ -0.36
ABCF1-205ENST00000475993 INTS3Q68E01 1043 aaKnown RBP12.77□□□□□ -0.36
ABCF1-205ENST00000475993 TMED8Q6PL24 325 aaPredicted RBP12.77□□□□□ -0.37
ABCF1-205ENST00000475993 SLFN14P0C7P3 912 aa12.76□□□□□ -0.37
ABCF1-205ENST00000475993 HSP90B1P14625 803 aaKnown RBP12.76□□□□□ -0.37
ABCF1-205ENST00000475993 C14orf37Q86TY3 774 aa12.76□□□□□ -0.37
ABCF1-205ENST00000475993 C1orf115Q9H7X2 142 aa12.76□□□□□ -0.37
ABCF1-205ENST00000475993 GEMIN8Q9NWZ8 242 aaKnown RBP12.76□□□□□ -0.37
ABCF1-205ENST00000475993 UHRF1BP1LA0JNW5 1464 aa12.76□□□□□ -0.37
ABCF1-205ENST00000475993 TRAPPC8Q9Y2L5 1435 aa12.76□□□□□ -0.37
ABCF1-205ENST00000475993 ABCA6Q8N139 1617 aa12.76□□□□□ -0.37
ABCF1-205ENST00000475993 SYCP1Q15431 976 aa12.76□□□□□ -0.37
ABCF1-205ENST00000475993 CFAP70Q5T0N1 1121 aa12.76□□□□□ -0.37
ABCF1-205ENST00000475993 ZNF622Q969S3 477 aaKnown RBP eCLIP12.76□□□□□ -0.371e-11■■■■■ 30.8
ABCF1-205ENST00000475993 CTNNA3Q9UI47 895 aa12.76□□□□□ -0.37
ABCF1-205ENST00000475993 FOXD4L5Q5VV16 416 aaPredicted RBP12.75□□□□□ -0.37
ABCF1-205ENST00000475993 FOXD4L4Q8WXT5 416 aaPredicted RBP12.75□□□□□ -0.37
ABCF1-205ENST00000475993 TNNT3P45378 269 aaPredicted RBP12.75□□□□□ -0.37
ABCF1-205ENST00000475993 NCBP1Q09161 790 aaKnown RBP12.75□□□□□ -0.37
ABCF1-205ENST00000475993 AXDND1Q5T1B0 1012 aaPredicted RBP12.75□□□□□ -0.37
ABCF1-205ENST00000475993 MAP3K4Q9Y6R4 1608 aa12.75□□□□□ -0.37
ABCF1-205ENST00000475993 NEURL4Q96JN8 1562 aa12.75□□□□□ -0.37
ABCF1-205ENST00000475993 INO80Q9ULG1 1556 aaPredicted RBP12.75□□□□□ -0.37
ABCF1-205ENST00000475993 SLC12A5Q9H2X9 1139 aa12.75□□□□□ -0.37
ABCF1-205ENST00000475993 MYOM2P54296 1465 aa12.74□□□□□ -0.37
ABCF1-205ENST00000475993 TULP2O00295 520 aa12.74□□□□□ -0.37
ABCF1-205ENST00000475993 PTCH1Q13635 1447 aa12.74□□□□□ -0.37
ABCF1-205ENST00000475993 ZNF428Q96B54 188 aa12.74□□□□□ -0.37
ABCF1-205ENST00000475993 KCNF1Q9H3M0 494 aa12.74□□□□□ -0.37
ABCF1-205ENST00000475993 ERICH4A6NGS2 130 aa12.74□□□□□ -0.37
ABCF1-205ENST00000475993 KDM4AO75164 1064 aa12.74□□□□□ -0.37
ABCF1-205ENST00000475993 ARHGAP45Q92619 1136 aa12.74□□□□□ -0.37
ABCF1-205ENST00000475993 TMX3Q96JJ7 454 aa12.74□□□□□ -0.37
ABCF1-205ENST00000475993 YY1AP1Q9H869 796 aa12.74□□□□□ -0.37
ABCF1-205ENST00000475993 DDX41Q9UJV9 622 aaKnown RBP12.74□□□□□ -0.37
ABCF1-205ENST00000475993 PYCARDQ9ULZ3 195 aa12.74□□□□□ -0.37
ABCF1-205ENST00000475993 CUL4AQ13619 759 aa12.73□□□□□ -0.37
ABCF1-205ENST00000475993 GADD45BO75293 160 aaPredicted RBP12.73□□□□□ -0.37
ABCF1-205ENST00000475993 TPM3P06753 285 aa12.73□□□□□ -0.37
ABCF1-205ENST00000475993 CHMP7Q8WUX9 453 aaPredicted RBP12.72□□□□□ -0.37
ABCF1-205ENST00000475993 MORC2Q9Y6X9 1032 aaPredicted RBP12.72□□□□□ -0.37
ABCF1-205ENST00000475993 NSD2O96028 1365 aa12.72□□□□□ -0.37
ABCF1-205ENST00000475993 CCDC183Q5T5S1 534 aa12.72□□□□□ -0.37
ABCF1-205ENST00000475993 REC8O95072 547 aa12.71□□□□□ -0.37
ABCF1-205ENST00000475993 HCLS1P14317 486 aaPredicted RBP12.71□□□□□ -0.37
ABCF1-205ENST00000475993 ARHGAP5Q13017 1502 aa12.71□□□□□ -0.37
ABCF1-205ENST00000475993 MCM2P49736 904 aa12.71□□□□□ -0.37
ABCF1-205ENST00000475993 TERF2Q15554 542 aa12.71□□□□□ -0.37
ABCF1-205ENST00000475993 CASC1Q6TDU7 716 aa12.71□□□□□ -0.37
ABCF1-205ENST00000475993 USP48Q86UV5 1035 aa12.71□□□□□ -0.37
ABCF1-205ENST00000475993 INTS4Q96HW7 963 aaKnown RBP12.71□□□□□ -0.37
ABCF1-205ENST00000475993 DCTPP1Q9H773 170 aa12.71□□□□□ -0.37
ABCF1-205ENST00000475993 CALCOCO1Q9P1Z2 691 aa12.71□□□□□ -0.37
ABCF1-205ENST00000475993 ABCC4O15439 1325 aa12.71□□□□□ -0.38
ABCF1-205ENST00000475993 SDSP20132 328 aa12.71□□□□□ -0.38
ABCF1-205ENST00000475993 TMEM87AQ8NBN3 555 aa12.71□□□□□ -0.38
ABCF1-205ENST00000475993 JPH4Q96JJ6 628 aa12.71□□□□□ -0.38
ABCF1-205ENST00000475993 ZC3H13Q5T200 1668 aaKnown RBP12.7□□□□□ -0.38
ABCF1-205ENST00000475993 MRPL50Q8N5N7 158 aaKnown RBP12.7□□□□□ -0.38
ABCF1-205ENST00000475993 MX1P20591 662 aa12.7□□□□□ -0.38
ABCF1-205ENST00000475993 TSPYL1Q9H0U9 437 aa12.7□□□□□ -0.38
ABCF1-205ENST00000475993 COL3A1P02461 1466 aaPredicted RBP12.7□□□□□ -0.38
ABCF1-205ENST00000475993 ADGRF5Q8IZF2 1346 aa12.7□□□□□ -0.38
ABCF1-205ENST00000475993 SMARCA5O60264 1052 aaPredicted RBP12.69□□□□□ -0.38
ABCF1-205ENST00000475993 C16orf71Q8IYS4 520 aaPredicted RBP12.69□□□□□ -0.38
ABCF1-205ENST00000475993 GDPD2Q9HCC8 539 aa12.69□□□□□ -0.38
ABCF1-205ENST00000475993 KNDC1Q76NI1 1749 aa12.69□□□□□ -0.38
ABCF1-205ENST00000475993 AP5Z1O43299 807 aa12.69□□□□□ -0.38
ABCF1-205ENST00000475993 LMOD3Q0VAK6 560 aa12.69□□□□□ -0.38
ABCF1-205ENST00000475993 BANK1Q8NDB2 785 aa12.69□□□□□ -0.38
ABCF1-205ENST00000475993 TMX1Q9H3N1 280 aa12.69□□□□□ -0.38
ABCF1-205ENST00000475993 FEZ2Q9UHY8 353 aaPredicted RBP12.69□□□□□ -0.38
ABCF1-205ENST00000475993 NEK4P51957 841 aa12.68□□□□□ -0.38
ABCF1-205ENST00000475993 KIF18AQ8NI77 898 aa12.68□□□□□ -0.38
ABCF1-205ENST00000475993 FUCA2Q9BTY2 467 aa12.68□□□□□ -0.38
ABCF1-205ENST00000475993 SMTNL1A8MU46 457 aa12.68□□□□□ -0.38
ABCF1-205ENST00000475993 ERC2O15083 957 aa12.68□□□□□ -0.38
ABCF1-205ENST00000475993 NRXN1Q9ULB1 1477 aa12.68□□□□□ -0.38
ABCF1-205ENST00000475993 U2SURPO15042 1029 aaKnown RBP12.67□□□□□ -0.38
ABCF1-205ENST00000475993 EFCC1Q9HA90 598 aa12.67□□□□□ -0.38
ABCF1-205ENST00000475993 GOLGA6L6A8MZA4 724 aa12.67□□□□□ -0.38
ABCF1-205ENST00000475993 VAMP4O75379 141 aa12.67□□□□□ -0.38
ABCF1-205ENST00000475993 TCHHQ07283 1943 aa12.67□□□□□ -0.38
ABCF1-205ENST00000475993 OTUD7AQ8TE49 926 aaPredicted RBP12.67□□□□□ -0.38
ABCF1-205ENST00000475993 IFT172Q9UG01 1749 aa12.67□□□□□ -0.38
ABCF1-205ENST00000475993 SETBP1Q9Y6X0 1596 aa12.67□□□□□ -0.38
ABCF1-205ENST00000475993 QRICH2Q9H0J4 1663 aa12.66□□□□□ -0.38
ABCF1-205ENST00000475993 RTL1A6NKG5 1358 aa12.66□□□□□ -0.38
ABCF1-205ENST00000475993 RPAP1Q9BWH6 1393 aaPredicted RBP12.66□□□□□ -0.38
ABCF1-205ENST00000475993 GTF2A1P52655 376 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 580 ms