RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 CALD1Q05682 793 aaKnown RBP15.99■□□□□ 0.15
MRPL55-227ENST00000475832 WDR63Q8IWG1 891 aa15.99■□□□□ 0.15
MRPL55-227ENST00000475832 RRP7AQ9Y3A4 280 aaKnown RBP15.99■□□□□ 0.15
MRPL55-227ENST00000475832 COL18A1P39060 1754 aa15.99■□□□□ 0.15
MRPL55-227ENST00000475832 IGSF1Q8N6C5 1336 aa15.98■□□□□ 0.15
MRPL55-227ENST00000475832 ZNF521Q96K83 1311 aa15.98■□□□□ 0.15
MRPL55-227ENST00000475832 RIPK4P57078 832 aa15.98■□□□□ 0.15
MRPL55-227ENST00000475832 EN1Q05925 392 aaPredicted RBP15.98■□□□□ 0.15
MRPL55-227ENST00000475832 NFE2L2Q16236 605 aa15.98■□□□□ 0.15
MRPL55-227ENST00000475832 WWC1Q8IX03 1113 aa15.98■□□□□ 0.15
MRPL55-227ENST00000475832 CCDC9Q9Y3X0 531 aaKnown RBP15.98■□□□□ 0.15
MRPL55-227ENST00000475832 ABCC6O95255 1503 aa15.98■□□□□ 0.15
MRPL55-227ENST00000475832 COL5A2P05997 1499 aaPredicted RBP15.97■□□□□ 0.15
MRPL55-227ENST00000475832 A0A0G2JS52 829 aa15.97■□□□□ 0.15
MRPL55-227ENST00000475832 MYT1Q01538 1121 aa15.97■□□□□ 0.15
MRPL55-227ENST00000475832 EYA1Q99502 592 aa15.97■□□□□ 0.15
MRPL55-227ENST00000475832 SPATA31A1Q5TZJ5 1347 aa15.96■□□□□ 0.15
MRPL55-227ENST00000475832 ANKRD24Q8TF21 1146 aa15.96■□□□□ 0.15
MRPL55-227ENST00000475832 MYH16Q9H6N6 1097 aa15.96■□□□□ 0.15
MRPL55-227ENST00000475832 AXIN2Q9Y2T1 843 aa15.96■□□□□ 0.15
MRPL55-227ENST00000475832 BRWD3Q6RI45 1802 aa15.95■□□□□ 0.14
MRPL55-227ENST00000475832 CSB-PGBD3P0DP91 1061 aa15.94■□□□□ 0.14
MRPL55-227ENST00000475832 EVA1CP58658 441 aa15.94■□□□□ 0.14
MRPL55-227ENST00000475832 SLFN5Q08AF3 891 aa15.94■□□□□ 0.14
MRPL55-227ENST00000475832 LARP1Q6PKG0 1096 aaKnown RBP15.94■□□□□ 0.14
MRPL55-227ENST00000475832 AEBP1Q8IUX7 1158 aa15.94■□□□□ 0.14
MRPL55-227ENST00000475832 GAS2L2Q8NHY3 880 aa15.94■□□□□ 0.14
MRPL55-227ENST00000475832 CDCA7LQ96GN5 454 aa15.94■□□□□ 0.14
MRPL55-227ENST00000475832 STRN4Q9NRL3 753 aa15.94■□□□□ 0.14
MRPL55-227ENST00000475832 KDRP35968 1356 aa15.94■□□□□ 0.14
MRPL55-227ENST00000475832 LTN1O94822 1766 aa15.94■□□□□ 0.14
MRPL55-227ENST00000475832 IL16Q14005 1332 aa15.93■□□□□ 0.14
MRPL55-227ENST00000475832 THSD7AQ9UPZ6 1657 aa15.92■□□□□ 0.14
MRPL55-227ENST00000475832 FAM98CQ17RN3 349 aaKnown RBP15.92■□□□□ 0.14
MRPL55-227ENST00000475832 BARGINQ6ZT62 677 aa15.92■□□□□ 0.14
MRPL55-227ENST00000475832 PHACTR3Q96KR7 559 aa15.92■□□□□ 0.14
MRPL55-227ENST00000475832 PPP1R1BQ9UD71 204 aaPredicted RBP15.92■□□□□ 0.14
MRPL55-227ENST00000475832 GTF3C3Q9Y5Q9 886 aa15.92■□□□□ 0.14
MRPL55-227ENST00000475832 CRB1P82279 1406 aa15.92■□□□□ 0.14
MRPL55-227ENST00000475832 THRAP3Q9Y2W1 955 aaKnown RBP15.91■□□□□ 0.14
MRPL55-227ENST00000475832 WDR17Q8IZU2 1322 aa15.91■□□□□ 0.14
MRPL55-227ENST00000475832 RGPD1P0DJD0 1748 aa15.91■□□□□ 0.14
MRPL55-227ENST00000475832 NBPF6Q5VWK0 638 aa15.9■□□□□ 0.14
MRPL55-227ENST00000475832 DUSP27Q5VZP5 1158 aa15.9■□□□□ 0.14
MRPL55-227ENST00000475832 RTF1Q92541 710 aaKnown RBP15.9■□□□□ 0.14
MRPL55-227ENST00000475832 NBPF4Q96M43 638 aa15.9■□□□□ 0.14
MRPL55-227ENST00000475832 TRIM35Q9UPQ4 493 aa15.9■□□□□ 0.14
MRPL55-227ENST00000475832 SUPT16HQ9Y5B9 1047 aaKnown RBP15.9■□□□□ 0.14
MRPL55-227ENST00000475832 ERBB3P21860 1342 aa15.9■□□□□ 0.14
MRPL55-227ENST00000475832 NLRP2Q9NX02 1062 aa15.89■□□□□ 0.13
MRPL55-227ENST00000475832 RCAN3Q9UKA8 241 aa15.89■□□□□ 0.13
MRPL55-227ENST00000475832 RGPD5Q99666 1765 aa15.88■□□□□ 0.13
MRPL55-227ENST00000475832 HTATSF1O43719 755 aaKnown RBP15.88■□□□□ 0.13
MRPL55-227ENST00000475832 AMOTQ4VCS5 1084 aa15.88■□□□□ 0.13
MRPL55-227ENST00000475832 PLEKHO1Q53GL0 409 aaPredicted RBP15.88■□□□□ 0.13
MRPL55-227ENST00000475832 TRMT2AQ8IZ69 625 aaKnown RBP15.88■□□□□ 0.13
MRPL55-227ENST00000475832 GNAI1P63096 354 aa15.87■□□□□ 0.13
MRPL55-227ENST00000475832 EZH2Q15910 746 aaKnown RBP15.87■□□□□ 0.13
MRPL55-227ENST00000475832 USHBP1Q8N6Y0 703 aa15.87■□□□□ 0.13
MRPL55-227ENST00000475832 RAPGEF4Q8WZA2 1011 aa15.87■□□□□ 0.13
MRPL55-227ENST00000475832 USP35Q9P2H5 1018 aa15.87■□□□□ 0.13
MRPL55-227ENST00000475832 ZNF784Q8NCA9 323 aaPredicted RBP15.86■□□□□ 0.13
MRPL55-227ENST00000475832 CARD10Q9BWT7 1032 aa15.86■□□□□ 0.13
MRPL55-227ENST00000475832 MTHFSDQ2M296 383 aaKnown RBP15.85■□□□□ 0.13
MRPL55-227ENST00000475832 TOM1L2Q6ZVM7 507 aa15.85■□□□□ 0.13
MRPL55-227ENST00000475832 IFT57Q9NWB7 429 aa15.85■□□□□ 0.13
MRPL55-227ENST00000475832 PLEKHG2Q9H7P9 1386 aa15.85■□□□□ 0.13
MRPL55-227ENST00000475832 GNAT3A8MTJ3 354 aa15.84■□□□□ 0.13
MRPL55-227ENST00000475832 CT47B1P0C2W7 299 aaPredicted RBP15.84■□□□□ 0.13
MRPL55-227ENST00000475832 TATP17735 454 aaPredicted RBP15.84■□□□□ 0.13
MRPL55-227ENST00000475832 C1QTNF8P60827 252 aa15.84■□□□□ 0.13
MRPL55-227ENST00000475832 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.84■□□□□ 0.13
MRPL55-227ENST00000475832 PARP4Q9UKK3 1724 aaKnown RBP15.83■□□□□ 0.13
MRPL55-227ENST00000475832 C1orf141Q5JVX7 400 aa15.83■□□□□ 0.12
MRPL55-227ENST00000475832 SPINK5Q9NQ38 1064 aaPredicted RBP15.83■□□□□ 0.12
MRPL55-227ENST00000475832 LAS1LQ9Y4W2 734 aaKnown RBP15.83■□□□□ 0.12
MRPL55-227ENST00000475832 DISP2A7MBM2 1401 aa15.83■□□□□ 0.12
MRPL55-227ENST00000475832 NCAPD2Q15021 1401 aa15.83■□□□□ 0.12
MRPL55-227ENST00000475832 FAM182BQ5T319 152 aa15.82■□□□□ 0.12
MRPL55-227ENST00000475832 SPON1Q9HCB6 807 aa15.82■□□□□ 0.12
MRPL55-227ENST00000475832 SPG7Q9UQ90 795 aa15.82■□□□□ 0.12
MRPL55-227ENST00000475832 MAP3K5Q99683 1374 aa15.82■□□□□ 0.12
MRPL55-227ENST00000475832 FAM208AQ9UK61 1670 aaKnown RBP15.82■□□□□ 0.12
MRPL55-227ENST00000475832 FKBP8Q14318 412 aa15.81■□□□□ 0.12
MRPL55-227ENST00000475832 ERICH6BQ5W0A0 696 aa15.81■□□□□ 0.12
MRPL55-227ENST00000475832 CFAP44Q96MT7 982 aa15.81■□□□□ 0.12
MRPL55-227ENST00000475832 CDCA7Q9BWT1 371 aaPredicted RBP15.81■□□□□ 0.12
MRPL55-227ENST00000475832 FANCIQ9NVI1 1328 aa15.81■□□□□ 0.12
MRPL55-227ENST00000475832 WNK3Q9BYP7 1800 aa15.8■□□□□ 0.12
MRPL55-227ENST00000475832 AKAP4Q5JQC9 854 aa15.8■□□□□ 0.12
MRPL55-227ENST00000475832 NBPF14Q5TI25 921 aa15.8■□□□□ 0.12
MRPL55-227ENST00000475832 ZNF530Q6P9A1 599 aaPredicted RBP15.8■□□□□ 0.12
MRPL55-227ENST00000475832 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.8■□□□□ 0.12
MRPL55-227ENST00000475832 CAMKK2Q96RR4 588 aa15.79■□□□□ 0.12
MRPL55-227ENST00000475832 LRRC37A3O60309 1634 aa15.79■□□□□ 0.12
MRPL55-227ENST00000475832 RNF123Q5XPI4 1314 aa15.78■□□□□ 0.12
MRPL55-227ENST00000475832 RRP1P56182 461 aaKnown RBP15.78■□□□□ 0.12
MRPL55-227ENST00000475832 MCM10Q7L590 875 aa15.78■□□□□ 0.12
MRPL55-227ENST00000475832 TSR2Q969E8 191 aaKnown RBP15.78■□□□□ 0.12
MRPL55-227ENST00000475832 THUMPD2Q9BTF0 503 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms