RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 BCL11BQ9C0K0 894 aaPredicted RBP9.46□□□□□ -0.9
SHQ1-207ENST00000475558 METRNQ9UJH8 293 aa9.46□□□□□ -0.9
SHQ1-207ENST00000475558 COL5A2P05997 1499 aaPredicted RBP9.46□□□□□ -0.9
SHQ1-207ENST00000475558 TOPAZ1Q8N9V7 1692 aa9.45□□□□□ -0.9
SHQ1-207ENST00000475558 ASTLQ6HA08 431 aaPredicted RBP9.45□□□□□ -0.9
SHQ1-207ENST00000475558 SLC39A7Q92504 469 aa9.45□□□□□ -0.9
SHQ1-207ENST00000475558 CDCA7Q9BWT1 371 aaPredicted RBP9.45□□□□□ -0.9
SHQ1-207ENST00000475558 CABP1Q9NZU7 370 aa9.45□□□□□ -0.9
SHQ1-207ENST00000475558 AATKQ6ZMQ8 1374 aa9.45□□□□□ -0.9
SHQ1-207ENST00000475558 ANKRD36BQ8N2N9 1353 aa9.45□□□□□ -0.9
SHQ1-207ENST00000475558 RGPD3A6NKT7 1758 aaPredicted RBP9.45□□□□□ -0.9
SHQ1-207ENST00000475558 RGPD4Q7Z3J3 1758 aa9.45□□□□□ -0.9
SHQ1-207ENST00000475558 ZBTB7CA1YPR0 619 aa9.44□□□□□ -0.9
SHQ1-207ENST00000475558 NLRP6P59044 892 aa9.44□□□□□ -0.9
SHQ1-207ENST00000475558 TOM1L2Q6ZVM7 507 aa9.44□□□□□ -0.9
SHQ1-207ENST00000475558 NSD2O96028 1365 aa9.44□□□□□ -0.9
SHQ1-207ENST00000475558 SBF2Q86WG5 1849 aa9.44□□□□□ -0.9
SHQ1-207ENST00000475558 PEAK1Q9H792 1746 aa9.43□□□□□ -0.9
SHQ1-207ENST00000475558 PPIP5K1Q6PFW1 1433 aa9.43□□□□□ -0.9
SHQ1-207ENST00000475558 MYBBP1AQ9BQG0 1328 aaKnown RBP9.43□□□□□ -0.9
SHQ1-207ENST00000475558 ATMINO43313 823 aaPredicted RBP9.43□□□□□ -0.9
SHQ1-207ENST00000475558 C7P10643 843 aa9.43□□□□□ -0.9
SHQ1-207ENST00000475558 AMER1Q5JTC6 1135 aaPredicted RBP9.43□□□□□ -0.9
SHQ1-207ENST00000475558 ANO8Q9HCE9 1232 aaPredicted RBP9.43□□□□□ -0.9
SHQ1-207ENST00000475558 BCL9O00512 1426 aa9.42□□□□□ -0.9
SHQ1-207ENST00000475558 WDR17Q8IZU2 1322 aa9.42□□□□□ -0.9
SHQ1-207ENST00000475558 ZBTB7AO95365 584 aa9.42□□□□□ -0.9
SHQ1-207ENST00000475558 PROM2Q8N271 834 aa9.42□□□□□ -0.9
SHQ1-207ENST00000475558 STK32BQ9NY57 414 aa9.42□□□□□ -0.9
SHQ1-207ENST00000475558 EXOC5O00471 708 aa9.41□□□□□ -0.9
SHQ1-207ENST00000475558 PTGER2P43116 358 aa9.41□□□□□ -0.9
SHQ1-207ENST00000475558 SLC15A2Q16348 729 aa9.41□□□□□ -0.9
SHQ1-207ENST00000475558 TXNRD1Q16881 649 aa9.41□□□□□ -0.9
SHQ1-207ENST00000475558 PTF1AQ7RTS3 328 aa9.41□□□□□ -0.9
SHQ1-207ENST00000475558 MORC1Q86VD1 984 aa9.41□□□□□ -0.9
SHQ1-207ENST00000475558 MARCH10Q8NA82 808 aaPredicted RBP9.41□□□□□ -0.9
SHQ1-207ENST00000475558 ZNF784Q8NCA9 323 aaPredicted RBP9.41□□□□□ -0.9
SHQ1-207ENST00000475558 CARD10Q9BWT7 1032 aa9.41□□□□□ -0.9
SHQ1-207ENST00000475558 CARD14Q9BXL6 1004 aa9.41□□□□□ -0.9
SHQ1-207ENST00000475558 PDGFDQ9GZP0 370 aaPredicted RBP9.41□□□□□ -0.9
SHQ1-207ENST00000475558 CASZ1Q86V15 1759 aa9.41□□□□□ -0.9
SHQ1-207ENST00000475558 USP6P35125 1406 aa9.4□□□□□ -0.9
SHQ1-207ENST00000475558 POTEMA6NI47 508 aa9.4□□□□□ -0.9
SHQ1-207ENST00000475558 KCNH5Q8NCM2 988 aa9.4□□□□□ -0.9
SHQ1-207ENST00000475558 SYT17Q9BSW7 474 aa9.4□□□□□ -0.9
SHQ1-207ENST00000475558 AXIN2Q9Y2T1 843 aa9.4□□□□□ -0.9
SHQ1-207ENST00000475558 LRRC37A3O60309 1634 aa9.4□□□□□ -0.9
SHQ1-207ENST00000475558 SLIT3O75094 1523 aa9.4□□□□□ -0.91
SHQ1-207ENST00000475558 CENPBP07199 599 aaPredicted RBP9.39□□□□□ -0.91
SHQ1-207ENST00000475558 CSB-PGBD3P0DP91 1061 aa9.39□□□□□ -0.91
SHQ1-207ENST00000475558 CC2D1BQ5T0F9 858 aaKnown RBP9.39□□□□□ -0.91
SHQ1-207ENST00000475558 ARHGEF25Q86VW2 580 aa9.39□□□□□ -0.91
SHQ1-207ENST00000475558 CFAP53Q96M91 514 aa9.39□□□□□ -0.91
SHQ1-207ENST00000475558 FHDC1Q9C0D6 1143 aaPredicted RBP9.39□□□□□ -0.91
SHQ1-207ENST00000475558 MTFR1LQ9H019 292 aa9.39□□□□□ -0.91
SHQ1-207ENST00000475558 MRS2Q9HD23 443 aa9.39□□□□□ -0.91
SHQ1-207ENST00000475558 TTC21AQ8NDW8 1320 aa9.38□□□□□ -0.91
SHQ1-207ENST00000475558 COL18A1P39060 1754 aa9.38□□□□□ -0.91
SHQ1-207ENST00000475558 AKAP12Q02952 1782 aa9.38□□□□□ -0.91
SHQ1-207ENST00000475558 MAMSTRQ6ZN01 415 aa9.38□□□□□ -0.91
SHQ1-207ENST00000475558 CHD4Q14839 1912 aa9.38□□□□□ -0.91
SHQ1-207ENST00000475558 MYOM1P52179 1685 aa9.37□□□□□ -0.91
SHQ1-207ENST00000475558 FYB1O15117 783 aa9.37□□□□□ -0.91
SHQ1-207ENST00000475558 POTEGQ6S5H5 508 aa9.37□□□□□ -0.91
SHQ1-207ENST00000475558 NGEFQ8N5V2 710 aa9.37□□□□□ -0.91
SHQ1-207ENST00000475558 COG3Q96JB2 828 aa9.37□□□□□ -0.91
SHQ1-207ENST00000475558 PNNQ9H307 717 aaKnown RBP9.37□□□□□ -0.91
SHQ1-207ENST00000475558 CPSF1Q10570 1443 aaKnown RBP9.37□□□□□ -0.91
SHQ1-207ENST00000475558 WNK3Q9BYP7 1800 aa9.36□□□□□ -0.91
SHQ1-207ENST00000475558 SENP3-EIF4A1A0A087X0R7 540 aa9.36□□□□□ -0.91
SHQ1-207ENST00000475558 PPP2R1AP30153 589 aa9.36□□□□□ -0.91
SHQ1-207ENST00000475558 C1QTNF8P60827 252 aa9.36□□□□□ -0.91
SHQ1-207ENST00000475558 ARXQ96QS3 562 aa9.36□□□□□ -0.91
SHQ1-207ENST00000475558 SGIP1Q9BQI5 828 aa9.36□□□□□ -0.91
SHQ1-207ENST00000475558 NUDCQ9Y266 331 aa9.36□□□□□ -0.91
SHQ1-207ENST00000475558 EDC4Q6P2E9 1401 aaKnown RBP9.36□□□□□ -0.91
SHQ1-207ENST00000475558 INSRP06213 1382 aa9.36□□□□□ -0.91
SHQ1-207ENST00000475558 TTC21BQ7Z4L5 1316 aa9.35□□□□□ -0.91
SHQ1-207ENST00000475558 KAT6BQ8WYB5 2073 aa9.35□□□□□ -0.91
SHQ1-207ENST00000475558 ATN1P54259 1190 aaPredicted RBP9.35□□□□□ -0.91
SHQ1-207ENST00000475558 PNISRQ8TF01 805 aaKnown RBP9.35□□□□□ -0.91
SHQ1-207ENST00000475558 KIF12Q96FN5 646 aa9.35□□□□□ -0.91
SHQ1-207ENST00000475558 NSD3Q9BZ95 1437 aa9.35□□□□□ -0.91
SHQ1-207ENST00000475558 SCUBE2Q9NQ36 999 aa9.35□□□□□ -0.91
SHQ1-207ENST00000475558 PIK3C2AO00443 1686 aa9.35□□□□□ -0.91
SHQ1-207ENST00000475558 A0A1W2PP64 1363 aa9.35□□□□□ -0.91
SHQ1-207ENST00000475558 RGPD5Q99666 1765 aa9.35□□□□□ -0.91
SHQ1-207ENST00000475558 SOX12O15370 315 aa9.34□□□□□ -0.91
SHQ1-207ENST00000475558 QRICH2Q9H0J4 1663 aa9.34□□□□□ -0.91
SHQ1-207ENST00000475558 MAP3K5Q99683 1374 aa9.34□□□□□ -0.91
SHQ1-207ENST00000475558 TNS2Q63HR2 1409 aa9.33□□□□□ -0.92
SHQ1-207ENST00000475558 WDR43Q15061 677 aaKnown RBP eCLIP9.33□□□□□ -0.92
SHQ1-207ENST00000475558 GPR162Q16538 588 aa9.33□□□□□ -0.92
SHQ1-207ENST00000475558 SLC16A10Q8TF71 515 aa9.33□□□□□ -0.92
SHQ1-207ENST00000475558 ACSBG1Q96GR2 724 aa9.33□□□□□ -0.92
SHQ1-207ENST00000475558 UTRNP46939 3433 aa9.33□□□□□ -0.92
SHQ1-207ENST00000475558 IL2RBP14784 551 aa9.32□□□□□ -0.92
SHQ1-207ENST00000475558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.32□□□□□ -0.92
SHQ1-207ENST00000475558 NLRP2Q9NX02 1062 aa9.32□□□□□ -0.92
SHQ1-207ENST00000475558 ABCC6O95255 1503 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms