RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 FAM9BQ8IZU0 186 aa20.1■□□□□ 0.81
MCF2L-224ENST00000475524 CCDC9Q9Y3X0 531 aaKnown RBP20.1■□□□□ 0.81
MCF2L-224ENST00000475524 LRRC37A3O60309 1634 aa20.09■□□□□ 0.81
MCF2L-224ENST00000475524 ONECUT3O60422 494 aaPredicted RBP20.09■□□□□ 0.81
MCF2L-224ENST00000475524 AMOTQ4VCS5 1084 aa20.09■□□□□ 0.81
MCF2L-224ENST00000475524 NCBP3Q53F19 620 aaKnown RBP20.09■□□□□ 0.81
MCF2L-224ENST00000475524 SHANK3Q9BYB0 1731 aa20.09■□□□□ 0.81
MCF2L-224ENST00000475524 MAPK8IP3Q9UPT6 1336 aa20.08■□□□□ 0.81
MCF2L-224ENST00000475524 NGEFQ8N5V2 710 aa20.08■□□□□ 0.81
MCF2L-224ENST00000475524 PHF23Q9BUL5 403 aaPredicted RBP20.08■□□□□ 0.81
MCF2L-224ENST00000475524 TNS2Q63HR2 1409 aa20.08■□□□□ 0.8
MCF2L-224ENST00000475524 RBM6P78332 1123 aaKnown RBP20.07■□□□□ 0.8
MCF2L-224ENST00000475524 PLEKHO1Q53GL0 409 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-224ENST00000475524 USP35Q9P2H5 1018 aa20.06■□□□□ 0.8
MCF2L-224ENST00000475524 SPG7Q9UQ90 795 aa20.06■□□□□ 0.8
MCF2L-224ENST00000475524 GAS2L2Q8NHY3 880 aa20.05■□□□□ 0.8
MCF2L-224ENST00000475524 RGS17Q9UGC6 210 aaPredicted RBP20.05■□□□□ 0.8
MCF2L-224ENST00000475524 DLG5Q8TDM6 1919 aa20.05■□□□□ 0.8
MCF2L-224ENST00000475524 ADAMTS7Q9UKP4 1686 aa20.03■□□□□ 0.8
MCF2L-224ENST00000475524 PCDH11XQ9BZA7 1347 aa20.02■□□□□ 0.8
MCF2L-224ENST00000475524 PCDH11YQ9BZA8 1340 aa20.02■□□□□ 0.8
MCF2L-224ENST00000475524 FAM98CQ17RN3 349 aaKnown RBP20.02■□□□□ 0.8
MCF2L-224ENST00000475524 ZCRB1Q8TBF4 217 aaKnown RBP20.02■□□□□ 0.8
MCF2L-224ENST00000475524 PHACTR3Q96KR7 559 aa20.02■□□□□ 0.8
MCF2L-224ENST00000475524 NFE2L2Q16236 605 aa20.01■□□□□ 0.79
MCF2L-224ENST00000475524 CCDC146Q8IYE0 955 aa20.01■□□□□ 0.79
MCF2L-224ENST00000475524 VIRMAQ69YN4 1812 aaKnown RBP20■□□□□ 0.79
MCF2L-224ENST00000475524 EXOC5O00471 708 aa20■□□□□ 0.79
MCF2L-224ENST00000475524 RXRBP28702 533 aa20■□□□□ 0.79
MCF2L-224ENST00000475524 DDB1Q16531 1140 aa20■□□□□ 0.79
MCF2L-224ENST00000475524 HTATSF1O43719 755 aaKnown RBP19.99■□□□□ 0.79
MCF2L-224ENST00000475524 TMPOP42166 694 aaKnown RBP19.99■□□□□ 0.79
MCF2L-224ENST00000475524 LMOD3Q0VAK6 560 aa19.99■□□□□ 0.79
MCF2L-224ENST00000475524 MTHFSDQ2M296 383 aaKnown RBP19.99■□□□□ 0.79
MCF2L-224ENST00000475524 SCN11AQ9UI33 1791 aa19.98■□□□□ 0.79
MCF2L-224ENST00000475524 MAP3K5Q99683 1374 aa19.98■□□□□ 0.79
MCF2L-224ENST00000475524 APAF1O14727 1248 aa19.98■□□□□ 0.79
MCF2L-224ENST00000475524 HSP90AB1P08238 724 aaKnown RBP19.98■□□□□ 0.79
MCF2L-224ENST00000475524 CCDC27Q2M243 656 aa19.98■□□□□ 0.79
MCF2L-224ENST00000475524 AKAP4Q5JQC9 854 aa19.98■□□□□ 0.79
MCF2L-224ENST00000475524 ZNF530Q6P9A1 599 aaPredicted RBP19.98■□□□□ 0.79
MCF2L-224ENST00000475524 IFNL2Q8IZJ0 200 aa19.98■□□□□ 0.79
MCF2L-224ENST00000475524 BRWD3Q6RI45 1802 aa19.97■□□□□ 0.79
MCF2L-224ENST00000475524 BCL9O00512 1426 aa19.97■□□□□ 0.79
MCF2L-224ENST00000475524 NKX1-1Q15270 411 aaPredicted RBP19.97■□□□□ 0.79
MCF2L-224ENST00000475524 C1orf141Q5JVX7 400 aa19.97■□□□□ 0.79
MCF2L-224ENST00000475524 POTEAQ6S8J7 498 aa19.97■□□□□ 0.79
MCF2L-224ENST00000475524 GNAT3A8MTJ3 354 aa19.95■□□□□ 0.78
MCF2L-224ENST00000475524 CYP27B1O15528 508 aa19.95■□□□□ 0.78
MCF2L-224ENST00000475524 PHKG2P15735 406 aa19.95■□□□□ 0.78
MCF2L-224ENST00000475524 SEPT12Q8IYM1 358 aa19.95■□□□□ 0.78
MCF2L-224ENST00000475524 RGS12O14924 1447 aa19.93■□□□□ 0.78
MCF2L-224ENST00000475524 RIPK4P57078 832 aa19.93■□□□□ 0.78
MCF2L-224ENST00000475524 DCAF5Q96JK2 942 aa19.93■□□□□ 0.78
MCF2L-224ENST00000475524 MRC1P22897 1456 aa19.92■□□□□ 0.78
MCF2L-224ENST00000475524 A0A0G2JS52 829 aa19.92■□□□□ 0.78
MCF2L-224ENST00000475524 MYT1Q01538 1121 aa19.92■□□□□ 0.78
MCF2L-224ENST00000475524 PDE3BQ13370 1112 aa19.92■□□□□ 0.78
MCF2L-224ENST00000475524 CEMIPQ8WUJ3 1361 aa19.92■□□□□ 0.78
MCF2L-224ENST00000475524 SIPA1L3O60292 1781 aaPredicted RBP19.91■□□□□ 0.78
MCF2L-224ENST00000475524 RTF1Q92541 710 aaKnown RBP19.91■□□□□ 0.78
MCF2L-224ENST00000475524 DOT1LQ8TEK3 1739 aa19.9■□□□□ 0.78
MCF2L-224ENST00000475524 TOGARAM1Q9Y4F4 1720 aa19.9■□□□□ 0.78
MCF2L-224ENST00000475524 CALD1Q05682 793 aaKnown RBP19.9■□□□□ 0.78
MCF2L-224ENST00000475524 KDM6AO15550 1401 aaPredicted RBP19.9■□□□□ 0.78
MCF2L-224ENST00000475524 MARCH10Q8NA82 808 aaPredicted RBP19.89■□□□□ 0.77
MCF2L-224ENST00000475524 DDX54Q8TDD1 881 aaKnown RBP19.89■□□□□ 0.77
MCF2L-224ENST00000475524 TRIM35Q9UPQ4 493 aa19.89■□□□□ 0.77
MCF2L-224ENST00000475524 SBF2Q86WG5 1849 aa19.88■□□□□ 0.77
MCF2L-224ENST00000475524 ZBED9Q6R2W3 1325 aa19.88■□□□□ 0.77
MCF2L-224ENST00000475524 ZNF521Q96K83 1311 aa19.88■□□□□ 0.77
MCF2L-224ENST00000475524 HNRNPUQ00839 825 aaKnown RBP eCLIP19.88■□□□□ 0.77
MCF2L-224ENST00000475524 KRT27Q7Z3Y8 459 aa19.88■□□□□ 0.77
MCF2L-224ENST00000475524 RRP7AQ9Y3A4 280 aaKnown RBP19.88■□□□□ 0.77
MCF2L-224ENST00000475524 ITGB4P16144 1822 aa19.88■□□□□ 0.77
MCF2L-224ENST00000475524 NHSQ6T4R5 1651 aa19.87■□□□□ 0.77
MCF2L-224ENST00000475524 ERVV-2B6SEH9 535 aa19.87■□□□□ 0.77
MCF2L-224ENST00000475524 RNMTO43148 476 aaKnown RBP19.87■□□□□ 0.77
MCF2L-224ENST00000475524 WWC1Q8IX03 1113 aa19.87■□□□□ 0.77
MCF2L-224ENST00000475524 IL16Q14005 1332 aa19.86■□□□□ 0.77
MCF2L-224ENST00000475524 NEUROD2Q15784 382 aa19.86■□□□□ 0.77
MCF2L-224ENST00000475524 WDR63Q8IWG1 891 aa19.86■□□□□ 0.77
MCF2L-224ENST00000475524 IL17REQ8NFR9 667 aa19.85■□□□□ 0.77
MCF2L-224ENST00000475524 BABAM1Q9NWV8 329 aa19.85■□□□□ 0.77
MCF2L-224ENST00000475524 MPRIPQ6WCQ1 1025 aa19.84■□□□□ 0.77
MCF2L-224ENST00000475524 FAM196AQ6ZSG2 479 aa19.83■□□□□ 0.77
MCF2L-224ENST00000475524 PAPPAQ13219 1627 aa19.83■□□□□ 0.76
MCF2L-224ENST00000475524 TEFQ10587 303 aa19.82■□□□□ 0.76
MCF2L-224ENST00000475524 MCM10Q7L590 875 aa19.82■□□□□ 0.76
MCF2L-224ENST00000475524 SLC52A2Q9HAB3 445 aa19.82■□□□□ 0.76
MCF2L-224ENST00000475524 LGR6Q9HBX8 967 aa19.82■□□□□ 0.76
MCF2L-224ENST00000475524 KDM3BQ7LBC6 1761 aa19.82■□□□□ 0.76
MCF2L-224ENST00000475524 IFT57Q9NWB7 429 aa19.8■□□□□ 0.76
MCF2L-224ENST00000475524 DCTN1Q14203 1278 aa19.79■□□□□ 0.76
MCF2L-224ENST00000475524 TAF7Q15545 349 aaPredicted RBP19.79■□□□□ 0.76
MCF2L-224ENST00000475524 UBR2Q8IWV8 1755 aa19.78■□□□□ 0.76
MCF2L-224ENST00000475524 ZNF853P0CG23 659 aa19.78■□□□□ 0.76
MCF2L-224ENST00000475524 CABP4P57796 275 aa19.78■□□□□ 0.76
MCF2L-224ENST00000475524 GNAI1P63096 354 aa19.78■□□□□ 0.76
MCF2L-224ENST00000475524 GOLGA2Q08379 1002 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms