RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 FDX1P10109 184 aa7.92□□□□□ -1.14
ECHDC1-215ENST00000475319 GUCA2AQ02747 115 aa7.92□□□□□ -1.14
ECHDC1-215ENST00000475319 CCDC27Q2M243 656 aa7.92□□□□□ -1.14
ECHDC1-215ENST00000475319 CDCA8Q53HL2 280 aa7.92□□□□□ -1.14
ECHDC1-215ENST00000475319 LRRN4Q8WUT4 740 aa7.92□□□□□ -1.14
ECHDC1-215ENST00000475319 HPS1Q92902 700 aa7.92□□□□□ -1.14
ECHDC1-215ENST00000475319 UCN2Q96RP3 112 aa7.92□□□□□ -1.14
ECHDC1-215ENST00000475319 SPSB2Q99619 263 aa7.92□□□□□ -1.14
ECHDC1-215ENST00000475319 TFIP11Q9UBB9 837 aaKnown RBP7.92□□□□□ -1.14
ECHDC1-215ENST00000475319 TSC1Q92574 1164 aa7.91□□□□□ -1.14
ECHDC1-215ENST00000475319 FCF1Q9Y324 198 aaKnown RBP7.91□□□□□ -1.14
ECHDC1-215ENST00000475319 ADAM23O75077 832 aa7.9□□□□□ -1.14
ECHDC1-215ENST00000475319 USP46P62068 366 aa7.9□□□□□ -1.14
ECHDC1-215ENST00000475319 SND1Q7KZF4 910 aaKnown RBP eCLIP7.9□□□□□ -1.14
ECHDC1-215ENST00000475319 PRR7Q8TB68 274 aa7.9□□□□□ -1.14
ECHDC1-215ENST00000475319 EPS8L1Q8TE68 723 aa7.9□□□□□ -1.14
ECHDC1-215ENST00000475319 HLA-CQ95604 372 aa7.9□□□□□ -1.14
ECHDC1-215ENST00000475319 POLR3GLQ9BT43 218 aa7.9□□□□□ -1.14
ECHDC1-215ENST00000475319 VRTNQ9H8Y1 702 aa7.9□□□□□ -1.14
ECHDC1-215ENST00000475319 TMEM88BA6NKF7 163 aa7.89□□□□□ -1.15
ECHDC1-215ENST00000475319 VSIG8P0DPA2 414 aa7.89□□□□□ -1.15
ECHDC1-215ENST00000475319 GCGRP47871 477 aa7.89□□□□□ -1.15
ECHDC1-215ENST00000475319 TICAM2Q86XR7 235 aa7.89□□□□□ -1.15
ECHDC1-215ENST00000475319 LAMC3Q9Y6N6 1575 aa7.89□□□□□ -1.15
ECHDC1-215ENST00000475319 ATG7O95352 703 aa7.88□□□□□ -1.15
ECHDC1-215ENST00000475319 SCUBE3Q8IX30 993 aa7.88□□□□□ -1.15
ECHDC1-215ENST00000475319 HELBQ8NG08 1087 aaPredicted RBP7.88□□□□□ -1.15
ECHDC1-215ENST00000475319 ADAMTS8Q9UP79 889 aa7.88□□□□□ -1.15
ECHDC1-215ENST00000475319 CLSTN1O94985 981 aa7.88□□□□□ -1.15
ECHDC1-215ENST00000475319 MTMR2Q13614 643 aa7.88□□□□□ -1.15
ECHDC1-215ENST00000475319 ANP32BQ92688 251 aaKnown RBP7.88□□□□□ -1.15
ECHDC1-215ENST00000475319 SECISBP2LQ93073 1101 aaKnown RBP7.88□□□□□ -1.15
ECHDC1-215ENST00000475319 CFAP99D6REC4 459 aa7.87□□□□□ -1.15
ECHDC1-215ENST00000475319 CFHP08603 1231 aa7.87□□□□□ -1.15
ECHDC1-215ENST00000475319 AMOTL2Q9Y2J4 779 aa7.87□□□□□ -1.15
ECHDC1-215ENST00000475319 MAFBQ9Y5Q3 323 aaPredicted RBP7.87□□□□□ -1.15
ECHDC1-215ENST00000475319 PTMAP06454 111 aaKnown RBP7.86□□□□□ -1.15
ECHDC1-215ENST00000475319 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.86□□□□□ -1.15
ECHDC1-215ENST00000475319 NESP48681 1621 aa7.85□□□□□ -1.15
ECHDC1-215ENST00000475319 PEG3Q9GZU2 1588 aa7.85□□□□□ -1.15
ECHDC1-215ENST00000475319 NEFMP07197 916 aa7.85□□□□□ -1.15
ECHDC1-215ENST00000475319 SOX11P35716 441 aa7.85□□□□□ -1.15
ECHDC1-215ENST00000475319 TBC1D9Q6ZT07 1266 aa7.85□□□□□ -1.15
ECHDC1-215ENST00000475319 MRGPRX2Q96LB1 330 aa7.85□□□□□ -1.15
ECHDC1-215ENST00000475319 PDCL3Q9H2J4 239 aa7.85□□□□□ -1.15
ECHDC1-215ENST00000475319 SEMA3FQ13275 785 aa7.84□□□□□ -1.15
ECHDC1-215ENST00000475319 LCE3BQ5TA77 95 aa7.84□□□□□ -1.15
ECHDC1-215ENST00000475319 KANK3Q6NY19 840 aa7.84□□□□□ -1.15
ECHDC1-215ENST00000475319 SLC10A3P09131 477 aa7.83□□□□□ -1.16
ECHDC1-215ENST00000475319 CNPY4Q8N129 248 aa7.83□□□□□ -1.16
ECHDC1-215ENST00000475319 BTBD11A6QL63 1104 aa7.83□□□□□ -1.16
ECHDC1-215ENST00000475319 C6orf229H3BNL8 230 aa7.83□□□□□ -1.16
ECHDC1-215ENST00000475319 NR6A1Q15406 480 aa7.83□□□□□ -1.16
ECHDC1-215ENST00000475319 CADPSQ9ULU8 1353 aa7.82□□□□□ -1.16
ECHDC1-215ENST00000475319 CLGNO14967 610 aa7.82□□□□□ -1.16
ECHDC1-215ENST00000475319 IRS1P35568 1242 aa7.82□□□□□ -1.16
ECHDC1-215ENST00000475319 GRIPAP1Q4V328 841 aa7.82□□□□□ -1.16
ECHDC1-215ENST00000475319 PUS7Q96PZ0 661 aaKnown RBP7.82□□□□□ -1.16
ECHDC1-215ENST00000475319 ATP9BO43861 1147 aa7.81□□□□□ -1.16
ECHDC1-215ENST00000475319 PTMSP20962 102 aa7.81□□□□□ -1.16
ECHDC1-215ENST00000475319 TRIM46Q7Z4K8 759 aa7.81□□□□□ -1.16
ECHDC1-215ENST00000475319 GNEQ9Y223 722 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-215ENST00000475319 MCCP23508 829 aa7.8□□□□□ -1.16
ECHDC1-215ENST00000475319 IRX6P78412 446 aaPredicted RBP7.8□□□□□ -1.16
ECHDC1-215ENST00000475319 BRPF3Q9ULD4 1205 aa7.8□□□□□ -1.16
ECHDC1-215ENST00000475319 PER1O15534 1290 aaPredicted RBP7.79□□□□□ -1.16
ECHDC1-215ENST00000475319 AXDND1Q5T1B0 1012 aaPredicted RBP7.79□□□□□ -1.16
ECHDC1-215ENST00000475319 SMAP1Q8IYB5 467 aaPredicted RBP7.79□□□□□ -1.16
ECHDC1-215ENST00000475319 Q8N3U1 123 aa7.79□□□□□ -1.16
ECHDC1-215ENST00000475319 SYMPKQ92797 1274 aaKnown RBP7.79□□□□□ -1.16
ECHDC1-215ENST00000475319 ZMIZ1Q9ULJ6 1067 aa7.79□□□□□ -1.16
ECHDC1-215ENST00000475319 MRC2Q9UBG0 1479 aa7.79□□□□□ -1.16
ECHDC1-215ENST00000475319 THOC2Q8NI27 1593 aaKnown RBP7.79□□□□□ -1.16
ECHDC1-215ENST00000475319 MSTNO14793 375 aa7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 ANP32AP39687 249 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 RGS3P49796 1198 aa7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 EIF4G2P78344 907 aaKnown RBP eCLIP7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 FUT2Q10981 343 aa7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 KANK4Q5T7N3 995 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 TMEM164Q5U3C3 297 aa7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 B4GALNT3Q6L9W6 998 aa7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 IPO9Q96P70 1041 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 MROH2BQ7Z745 1585 aa7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 UNCXA6NJT0 531 aa7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 CAPN5O15484 640 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 BMP1P13497 986 aa7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 PNMA1Q8ND90 353 aa7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 STK32AQ8WU08 396 aa7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 ZNF622Q969S3 477 aaKnown RBP eCLIP7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 MAP7D2Q96T17 732 aa7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 PLCD4Q9BRC7 762 aa7.78□□□□□ -1.16
ECHDC1-215ENST00000475319 TRIM32Q13049 653 aa7.77□□□□□ -1.17
ECHDC1-215ENST00000475319 ELOAQ14241 798 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-215ENST00000475319 UTP14CQ5TAP6 766 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-215ENST00000475319 PIK3CDO00329 1044 aa7.76□□□□□ -1.17
ECHDC1-215ENST00000475319 TPM2P07951 284 aa7.76□□□□□ -1.17
ECHDC1-215ENST00000475319 MMP14P50281 582 aa7.76□□□□□ -1.17
ECHDC1-215ENST00000475319 SETQ01105 290 aaPredicted RBP7.76□□□□□ -1.17
ECHDC1-215ENST00000475319 KIF21AQ7Z4S6 1674 aa7.76□□□□□ -1.17
ECHDC1-215ENST00000475319 CEP164Q9UPV0 1460 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms