RNA–Protein interactions for RNA: ENST00000475163.5

TSPAN1-206, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-206ENST00000475163 NCAPD2Q15021 1401 aa13.61□□□□□ -0.23
TSPAN1-206ENST00000475163 ONECUT3O60422 494 aaPredicted RBP13.6□□□□□ -0.23
TSPAN1-206ENST00000475163 AEBP1Q8IUX7 1158 aa13.6□□□□□ -0.23
TSPAN1-206ENST00000475163 KDRP35968 1356 aa13.59□□□□□ -0.23
TSPAN1-206ENST00000475163 DISP2A7MBM2 1401 aa13.59□□□□□ -0.23
TSPAN1-206ENST00000475163 SEPT12Q8IYM1 358 aa13.59□□□□□ -0.23
TSPAN1-206ENST00000475163 UPF1Q92900 1129 aaKnown RBP eCLIP13.59□□□□□ -0.23
TSPAN1-206ENST00000475163 PNNQ9H307 717 aaKnown RBP13.59□□□□□ -0.23
TSPAN1-206ENST00000475163 BRWD3Q6RI45 1802 aa13.58□□□□□ -0.24
TSPAN1-206ENST00000475163 WNK3Q9BYP7 1800 aa13.58□□□□□ -0.24
TSPAN1-206ENST00000475163 FCHSD2O94868 740 aa13.58□□□□□ -0.24
TSPAN1-206ENST00000475163 MEGF6O75095 1541 aa13.58□□□□□ -0.24
TSPAN1-206ENST00000475163 PARP4Q9UKK3 1724 aaKnown RBP13.57□□□□□ -0.24
TSPAN1-206ENST00000475163 EXOC5O00471 708 aa13.57□□□□□ -0.24
TSPAN1-206ENST00000475163 DDB1Q16531 1140 aa13.57□□□□□ -0.24
TSPAN1-206ENST00000475163 PNISRQ8TF01 805 aaKnown RBP13.57□□□□□ -0.24
TSPAN1-206ENST00000475163 RSPH6AQ9H0K4 717 aa13.57□□□□□ -0.24
TSPAN1-206ENST00000475163 THSD7AQ9UPZ6 1657 aa13.56□□□□□ -0.24
TSPAN1-206ENST00000475163 OVOS2A0A0G2JMS6 1433 aa13.56□□□□□ -0.24
TSPAN1-206ENST00000475163 NEFMP07197 916 aa13.56□□□□□ -0.24
TSPAN1-206ENST00000475163 PRKAR2BP31323 418 aa13.56□□□□□ -0.24
TSPAN1-206ENST00000475163 PDE3BQ13370 1112 aa13.56□□□□□ -0.24
TSPAN1-206ENST00000475163 PLEKHO1Q53GL0 409 aaPredicted RBP13.56□□□□□ -0.24
TSPAN1-206ENST00000475163 ZCRB1Q8TBF4 217 aaKnown RBP13.56□□□□□ -0.24
TSPAN1-206ENST00000475163 ADAMTS8Q9UP79 889 aa13.56□□□□□ -0.24
TSPAN1-206ENST00000475163 SPG7Q9UQ90 795 aa13.56□□□□□ -0.24
TSPAN1-206ENST00000475163 PLEKHG2Q9H7P9 1386 aa13.56□□□□□ -0.24
TSPAN1-206ENST00000475163 AMOTQ4VCS5 1084 aa13.55□□□□□ -0.24
TSPAN1-206ENST00000475163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.55□□□□□ -0.24
TSPAN1-206ENST00000475163 EP400Q96L91 3159 aa13.55□□□□□ -0.24
TSPAN1-206ENST00000475163 FAM9BQ8IZU0 186 aa13.54□□□□□ -0.24
TSPAN1-206ENST00000475163 LRRC37A3O60309 1634 aa13.53□□□□□ -0.24
TSPAN1-206ENST00000475163 DDX54Q8TDD1 881 aaKnown RBP13.53□□□□□ -0.24
TSPAN1-206ENST00000475163 MAPK8IP3Q9UPT6 1336 aa13.53□□□□□ -0.24
TSPAN1-206ENST00000475163 TNS2Q63HR2 1409 aa13.53□□□□□ -0.24
TSPAN1-206ENST00000475163 KRT27Q7Z3Y8 459 aa13.52□□□□□ -0.25
TSPAN1-206ENST00000475163 RUNDC1Q96C34 613 aa13.52□□□□□ -0.25
TSPAN1-206ENST00000475163 PHACTR3Q96KR7 559 aa13.52□□□□□ -0.25
TSPAN1-206ENST00000475163 PLEKHF1Q96S99 279 aa13.52□□□□□ -0.25
TSPAN1-206ENST00000475163 PCDH11XQ9BZA7 1347 aa13.52□□□□□ -0.25
TSPAN1-206ENST00000475163 PCDH11YQ9BZA8 1340 aa13.52□□□□□ -0.25
TSPAN1-206ENST00000475163 PKD1L3Q7Z443 1732 aa13.52□□□□□ -0.25
TSPAN1-206ENST00000475163 MTHFSDQ2M296 383 aaKnown RBP13.51□□□□□ -0.25
TSPAN1-206ENST00000475163 ZNF530Q6P9A1 599 aaPredicted RBP13.51□□□□□ -0.25
TSPAN1-206ENST00000475163 CCDC146Q8IYE0 955 aa13.51□□□□□ -0.25
TSPAN1-206ENST00000475163 IFNL2Q8IZJ0 200 aa13.51□□□□□ -0.25
TSPAN1-206ENST00000475163 GAS2L2Q8NHY3 880 aa13.51□□□□□ -0.25
TSPAN1-206ENST00000475163 C1orf141Q5JVX7 400 aa13.5□□□□□ -0.25
TSPAN1-206ENST00000475163 MARCH10Q8NA82 808 aaPredicted RBP13.5□□□□□ -0.25
TSPAN1-206ENST00000475163 CYP27B1O15528 508 aa13.49□□□□□ -0.25
TSPAN1-206ENST00000475163 PHKG2P15735 406 aa13.49□□□□□ -0.25
TSPAN1-206ENST00000475163 SHANK3Q9BYB0 1731 aa13.49□□□□□ -0.25
TSPAN1-206ENST00000475163 HSP90AB1P08238 724 aaKnown RBP13.48□□□□□ -0.25
TSPAN1-206ENST00000475163 AKAP4Q5JQC9 854 aa13.48□□□□□ -0.25
TSPAN1-206ENST00000475163 NFE2L2Q16236 605 aa13.47□□□□□ -0.25
TSPAN1-206ENST00000475163 FAM182BQ5T319 152 aa13.47□□□□□ -0.25
TSPAN1-206ENST00000475163 FAM196AQ6ZSG2 479 aa13.47□□□□□ -0.25
TSPAN1-206ENST00000475163 GNAT3A8MTJ3 354 aa13.46□□□□□ -0.25
TSPAN1-206ENST00000475163 NKX1-1Q15270 411 aaPredicted RBP13.46□□□□□ -0.25
TSPAN1-206ENST00000475163 APAF1O14727 1248 aa13.45□□□□□ -0.26
TSPAN1-206ENST00000475163 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
TSPAN1-206ENST00000475163 RIPK4P57078 832 aa13.45□□□□□ -0.26
TSPAN1-206ENST00000475163 MPRIPQ6WCQ1 1025 aa13.45□□□□□ -0.26
TSPAN1-206ENST00000475163 RTF1Q92541 710 aaKnown RBP13.45□□□□□ -0.26
TSPAN1-206ENST00000475163 DCAF5Q96JK2 942 aa13.45□□□□□ -0.26
TSPAN1-206ENST00000475163 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
TSPAN1-206ENST00000475163 HTATSF1O43719 755 aaKnown RBP13.44□□□□□ -0.26
TSPAN1-206ENST00000475163 NEUROD2Q15784 382 aa13.44□□□□□ -0.26
TSPAN1-206ENST00000475163 RRP7AQ9Y3A4 280 aaKnown RBP13.44□□□□□ -0.26
TSPAN1-206ENST00000475163 BCL9O00512 1426 aa13.43□□□□□ -0.26
TSPAN1-206ENST00000475163 LMOD3Q0VAK6 560 aa13.43□□□□□ -0.26
TSPAN1-206ENST00000475163 ACSBG1Q96GR2 724 aa13.43□□□□□ -0.26
TSPAN1-206ENST00000475163 RNMTO43148 476 aaKnown RBP13.42□□□□□ -0.26
TSPAN1-206ENST00000475163 KDM6AO15550 1401 aaPredicted RBP13.41□□□□□ -0.26
TSPAN1-206ENST00000475163 ERVV-2B6SEH9 535 aa13.41□□□□□ -0.26
TSPAN1-206ENST00000475163 PRIM1P49642 420 aaKnown RBP13.41□□□□□ -0.26
TSPAN1-206ENST00000475163 IL17REQ8NFR9 667 aa13.41□□□□□ -0.26
TSPAN1-206ENST00000475163 SYTL4Q96C24 671 aaPredicted RBP13.41□□□□□ -0.26
TSPAN1-206ENST00000475163 LGR6Q9HBX8 967 aa13.41□□□□□ -0.26
TSPAN1-206ENST00000475163 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
TSPAN1-206ENST00000475163 DOT1LQ8TEK3 1739 aa13.4□□□□□ -0.26
TSPAN1-206ENST00000475163 SENP3-EIF4A1A0A087X0R7 540 aa13.4□□□□□ -0.26
TSPAN1-206ENST00000475163 CABP4P57796 275 aa13.4□□□□□ -0.26
TSPAN1-206ENST00000475163 DCTN1Q14203 1278 aa13.4□□□□□ -0.26
TSPAN1-206ENST00000475163 MCM10Q7L590 875 aa13.4□□□□□ -0.26
TSPAN1-206ENST00000475163 KCNQ2O43526 872 aa13.39□□□□□ -0.27
TSPAN1-206ENST00000475163 TRIM37O94972 964 aa13.39□□□□□ -0.27
TSPAN1-206ENST00000475163 TEFQ10587 303 aa13.39□□□□□ -0.27
TSPAN1-206ENST00000475163 NGEFQ8N5V2 710 aa13.39□□□□□ -0.27
TSPAN1-206ENST00000475163 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
TSPAN1-206ENST00000475163 TMOD3Q9NYL9 352 aa13.39□□□□□ -0.27
TSPAN1-206ENST00000475163 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
TSPAN1-206ENST00000475163 SALL2Q9Y467 1007 aaPredicted RBP13.39□□□□□ -0.27
TSPAN1-206ENST00000475163 SCN11AQ9UI33 1791 aa13.39□□□□□ -0.27
TSPAN1-206ENST00000475163 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
TSPAN1-206ENST00000475163 ADAMTS7Q9UKP4 1686 aa13.38□□□□□ -0.27
TSPAN1-206ENST00000475163 CEMIPQ8WUJ3 1361 aa13.38□□□□□ -0.27
TSPAN1-206ENST00000475163 CCDC27Q2M243 656 aa13.38□□□□□ -0.27
TSPAN1-206ENST00000475163 NFATC2IPQ8NCF5 419 aa13.38□□□□□ -0.27
TSPAN1-206ENST00000475163 SLC52A2Q9HAB3 445 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms