RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 DIAPH1O60610 1272 aaKnown RBP12.72□□□□□ -0.37
DDX39B-217ENST00000474961 PDAP1Q13442 181 aaKnown RBP12.72□□□□□ -0.37
DDX39B-217ENST00000474961 CHRNA2Q15822 529 aa12.72□□□□□ -0.37
DDX39B-217ENST00000474961 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
DDX39B-217ENST00000474961 NUTM2BA6NNL0 878 aaPredicted RBP12.71□□□□□ -0.37
DDX39B-217ENST00000474961 NUTM2EB1AL46 878 aaPredicted RBP12.71□□□□□ -0.37
DDX39B-217ENST00000474961 IL13P35225 146 aa12.71□□□□□ -0.37
DDX39B-217ENST00000474961 NUTM2AQ8IVF1 878 aaPredicted RBP12.71□□□□□ -0.37
DDX39B-217ENST00000474961 PRDM11Q9NQV5 511 aa12.71□□□□□ -0.37
DDX39B-217ENST00000474961 ABCC6O95255 1503 aa12.71□□□□□ -0.38
DDX39B-217ENST00000474961 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.38
DDX39B-217ENST00000474961 PSEN1P49768 467 aa12.7□□□□□ -0.38
DDX39B-217ENST00000474961 EIF4A2Q14240 407 aaKnown RBP12.7□□□□□ -0.38
DDX39B-217ENST00000474961 WDR43Q15061 677 aaKnown RBP eCLIP12.7□□□□□ -0.38
DDX39B-217ENST00000474961 NUDCQ9Y266 331 aa12.7□□□□□ -0.38
DDX39B-217ENST00000474961 AXIN2Q9Y2T1 843 aa12.7□□□□□ -0.38
DDX39B-217ENST00000474961 COL14A1Q05707 1796 aaKnown RBP12.7□□□□□ -0.38
DDX39B-217ENST00000474961 LMO7Q8WWI1 1683 aa12.7□□□□□ -0.38
DDX39B-217ENST00000474961 RGPD1P0DJD0 1748 aa12.69□□□□□ -0.38
DDX39B-217ENST00000474961 FAM83GA6ND36 823 aa12.69□□□□□ -0.38
DDX39B-217ENST00000474961 LTV1Q96GA3 475 aaPredicted RBP12.69□□□□□ -0.38
DDX39B-217ENST00000474961 TMEM106CQ9BVX2 250 aa12.69□□□□□ -0.38
DDX39B-217ENST00000474961 ADAMTS8Q9UP79 889 aa12.69□□□□□ -0.38
DDX39B-217ENST00000474961 BLMP54132 1417 aaPredicted RBP12.69□□□□□ -0.38
DDX39B-217ENST00000474961 SPATA31A6Q5VVP1 1343 aa12.68□□□□□ -0.38
DDX39B-217ENST00000474961 U2SURPO15042 1029 aaKnown RBP12.68□□□□□ -0.38
DDX39B-217ENST00000474961 ADAMTS2O95450 1211 aa12.68□□□□□ -0.38
DDX39B-217ENST00000474961 RTN4Q9NQC3 1192 aaKnown RBP12.68□□□□□ -0.38
DDX39B-217ENST00000474961 CAMTA1Q9Y6Y1 1673 aa12.67□□□□□ -0.38
DDX39B-217ENST00000474961 RGL2O15211 777 aa12.67□□□□□ -0.38
DDX39B-217ENST00000474961 U2AF1L5P0DN76 240 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-217ENST00000474961 U2AF1Q01081 240 aaKnown RBP eCLIP12.67□□□□□ -0.383e-17■■■□□ 17.7
DDX39B-217ENST00000474961 ANKRD24Q8TF21 1146 aa12.67□□□□□ -0.38
DDX39B-217ENST00000474961 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
DDX39B-217ENST00000474961 PLCH1Q4KWH8 1693 aa12.67□□□□□ -0.38
DDX39B-217ENST00000474961 ASTLQ6HA08 431 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-217ENST00000474961 BMP2KQ9NSY1 1161 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-217ENST00000474961 FAM208AQ9UK61 1670 aaKnown RBP12.66□□□□□ -0.38
DDX39B-217ENST00000474961 ATMINO43313 823 aaPredicted RBP12.65□□□□□ -0.38
DDX39B-217ENST00000474961 GOLGA2Q08379 1002 aa12.65□□□□□ -0.38
DDX39B-217ENST00000474961 RNF25Q96BH1 459 aaPredicted RBP12.65□□□□□ -0.38
DDX39B-217ENST00000474961 EYA1Q99502 592 aa12.65□□□□□ -0.38
DDX39B-217ENST00000474961 LRP6O75581 1613 aa12.65□□□□□ -0.38
DDX39B-217ENST00000474961 NWD2Q9ULI1 1742 aa12.65□□□□□ -0.38
DDX39B-217ENST00000474961 ERBB3P21860 1342 aa12.64□□□□□ -0.39
DDX39B-217ENST00000474961 TTLL13PA6NNM8 815 aa12.64□□□□□ -0.39
DDX39B-217ENST00000474961 HMOX1P09601 288 aa12.64□□□□□ -0.39
DDX39B-217ENST00000474961 BTG4Q9NY30 223 aa12.64□□□□□ -0.39
DDX39B-217ENST00000474961 COL5A2P05997 1499 aaPredicted RBP12.64□□□□□ -0.39
DDX39B-217ENST00000474961 IGSF1Q8N6C5 1336 aa12.63□□□□□ -0.39
DDX39B-217ENST00000474961 NRAPQ86VF7 1730 aa12.63□□□□□ -0.39
DDX39B-217ENST00000474961 CSB-PGBD3P0DP91 1061 aa12.63□□□□□ -0.39
DDX39B-217ENST00000474961 EVA1CP58658 441 aa12.63□□□□□ -0.39
DDX39B-217ENST00000474961 NBPF6Q5VWK0 638 aa12.63□□□□□ -0.39
DDX39B-217ENST00000474961 SULT6B1Q6IMI4 303 aa12.63□□□□□ -0.39
DDX39B-217ENST00000474961 NBPF4Q96M43 638 aa12.63□□□□□ -0.39
DDX39B-217ENST00000474961 FCHSD2O94868 740 aa12.62□□□□□ -0.39
DDX39B-217ENST00000474961 AEBP1Q8IUX7 1158 aa12.62□□□□□ -0.39
DDX39B-217ENST00000474961 CCDC146Q8IYE0 955 aa12.62□□□□□ -0.39
DDX39B-217ENST00000474961 USHBP1Q8N6Y0 703 aa12.62□□□□□ -0.39
DDX39B-217ENST00000474961 RSPH6AQ9H0K4 717 aa12.62□□□□□ -0.39
DDX39B-217ENST00000474961 STRN4Q9NRL3 753 aa12.62□□□□□ -0.39
DDX39B-217ENST00000474961 WDR17Q8IZU2 1322 aa12.62□□□□□ -0.39
DDX39B-217ENST00000474961 ATN1P54259 1190 aaPredicted RBP12.61□□□□□ -0.39
DDX39B-217ENST00000474961 MEX3CQ5U5Q3 659 aaKnown RBP12.61□□□□□ -0.39
DDX39B-217ENST00000474961 RUNDC1Q96C34 613 aa12.61□□□□□ -0.39
DDX39B-217ENST00000474961 NGLY1Q96IV0 654 aa12.61□□□□□ -0.39
DDX39B-217ENST00000474961 C8orf37Q96NL8 207 aa12.61□□□□□ -0.39
DDX39B-217ENST00000474961 PNNQ9H307 717 aaKnown RBP12.61□□□□□ -0.39
DDX39B-217ENST00000474961 NLRP2Q9NX02 1062 aa12.61□□□□□ -0.39
DDX39B-217ENST00000474961 SLIT2O94813 1529 aa12.61□□□□□ -0.39
DDX39B-217ENST00000474961 KDRP35968 1356 aa12.6□□□□□ -0.39
DDX39B-217ENST00000474961 POTEIP0CG38 1075 aa12.6□□□□□ -0.39
DDX39B-217ENST00000474961 PRKAR2BP31323 418 aa12.6□□□□□ -0.39
DDX39B-217ENST00000474961 LARP1Q6PKG0 1096 aaKnown RBP12.6□□□□□ -0.39
DDX39B-217ENST00000474961 YTHDC1Q96MU7 727 aaKnown RBP12.6□□□□□ -0.39
DDX39B-217ENST00000474961 PLEKHF1Q96S99 279 aa12.6□□□□□ -0.39
DDX39B-217ENST00000474961 NCAPD2Q15021 1401 aa12.6□□□□□ -0.39
DDX39B-217ENST00000474961 TOM1L2Q6ZVM7 507 aa12.59□□□□□ -0.39
DDX39B-217ENST00000474961 DLG5Q8TDM6 1919 aa12.58□□□□□ -0.39
DDX39B-217ENST00000474961 SENP3-EIF4A1A0A087X0R7 540 aa12.58□□□□□ -0.4
DDX39B-217ENST00000474961 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.58□□□□□ -0.4
DDX39B-217ENST00000474961 CRB1P82279 1406 aa12.58□□□□□ -0.4
DDX39B-217ENST00000474961 HNRNPUQ00839 825 aaKnown RBP eCLIP12.58□□□□□ -0.4
DDX39B-217ENST00000474961 FNBP4Q8N3X1 1017 aaPredicted RBP12.58□□□□□ -0.4
DDX39B-217ENST00000474961 SLC39A7Q92504 469 aa12.58□□□□□ -0.4
DDX39B-217ENST00000474961 ZFP91Q96JP5 570 aaPredicted RBP12.58□□□□□ -0.4
DDX39B-217ENST00000474961 CARD10Q9BWT7 1032 aa12.58□□□□□ -0.4
DDX39B-217ENST00000474961 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.58□□□□□ -0.4
DDX39B-217ENST00000474961 TRIM35Q9UPQ4 493 aa12.58□□□□□ -0.4
DDX39B-217ENST00000474961 APAF1O14727 1248 aa12.57□□□□□ -0.4
DDX39B-217ENST00000474961 NEFMP07197 916 aa12.57□□□□□ -0.4
DDX39B-217ENST00000474961 UNC5CLQ8IV45 518 aa12.57□□□□□ -0.4
DDX39B-217ENST00000474961 TCP11L2Q8N4U5 519 aa12.57□□□□□ -0.4
DDX39B-217ENST00000474961 PHACTR3Q96KR7 559 aa12.57□□□□□ -0.4
DDX39B-217ENST00000474961 BCL9LQ86UU0 1499 aa12.57□□□□□ -0.4
DDX39B-217ENST00000474961 MAPK8IP3Q9UPT6 1336 aa12.57□□□□□ -0.4
DDX39B-217ENST00000474961 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
DDX39B-217ENST00000474961 WNK3Q9BYP7 1800 aa12.55□□□□□ -0.4
DDX39B-217ENST00000474961 STK25O00506 426 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms