RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CDV3Q9UKY7 258 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-213ENST00000474240 KRBA1A5PL33 1030 aa7.15□□□□□ -1.26
ECHDC1-213ENST00000474240 RAB15P59190 212 aa7.15□□□□□ -1.26
ECHDC1-213ENST00000474240 TMEM132AQ24JP5 1023 aa7.15□□□□□ -1.26
ECHDC1-213ENST00000474240 GOPCQ9HD26 462 aa7.15□□□□□ -1.26
ECHDC1-213ENST00000474240 RIPOR1Q6ZS17 1223 aa7.14□□□□□ -1.27
ECHDC1-213ENST00000474240 PRICKLE2Q7Z3G6 844 aa7.14□□□□□ -1.27
ECHDC1-213ENST00000474240 TRIM22Q8IYM9 498 aa7.14□□□□□ -1.27
ECHDC1-213ENST00000474240 LILRB3O75022 631 aa7.13□□□□□ -1.27
ECHDC1-213ENST00000474240 SNRPNP63162 240 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-213ENST00000474240 RTL5Q5HYW3 569 aaPredicted RBP7.13□□□□□ -1.27
ECHDC1-213ENST00000474240 MYSM1Q5VVJ2 828 aa7.13□□□□□ -1.27
ECHDC1-213ENST00000474240 ZBTB33Q86T24 672 aa7.13□□□□□ -1.27
ECHDC1-213ENST00000474240 KDF1Q8NAX2 398 aaPredicted RBP7.13□□□□□ -1.27
ECHDC1-213ENST00000474240 PTGIRP43119 386 aa7.12□□□□□ -1.27
ECHDC1-213ENST00000474240 DBN1Q16643 649 aa7.12□□□□□ -1.27
ECHDC1-213ENST00000474240 SH3D19Q5HYK7 790 aa7.12□□□□□ -1.27
ECHDC1-213ENST00000474240 PDXDC2PQ6P474 469 aa7.12□□□□□ -1.27
ECHDC1-213ENST00000474240 FOXR1Q6PIV2 292 aa7.12□□□□□ -1.27
ECHDC1-213ENST00000474240 GTPBP3Q969Y2 492 aaKnown RBP7.12□□□□□ -1.27
ECHDC1-213ENST00000474240 LILRA1O75019 489 aa7.11□□□□□ -1.27
ECHDC1-213ENST00000474240 ADD1P35611 737 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-213ENST00000474240 KRTAP1-3Q8IUG1 177 aa7.11□□□□□ -1.27
ECHDC1-213ENST00000474240 FAM117AQ9C073 453 aa7.11□□□□□ -1.27
ECHDC1-213ENST00000474240 OIP5O43482 229 aa7.1□□□□□ -1.27
ECHDC1-213ENST00000474240 MX2P20592 715 aa7.1□□□□□ -1.27
ECHDC1-213ENST00000474240 TUSC1Q2TAM9 212 aa7.1□□□□□ -1.27
ECHDC1-213ENST00000474240 OCSTAMPQ9BR26 566 aa7.1□□□□□ -1.27
ECHDC1-213ENST00000474240 FKBPLQ9UIM3 349 aa7.1□□□□□ -1.27
ECHDC1-213ENST00000474240 COL8A1P27658 744 aa7.09□□□□□ -1.27
ECHDC1-213ENST00000474240 NBPF20Q3BBV1 942 aa7.09□□□□□ -1.27
ECHDC1-213ENST00000474240 GMCL1Q96IK5 515 aa7.09□□□□□ -1.27
ECHDC1-213ENST00000474240 TRERF1Q96PN7 1200 aa7.09□□□□□ -1.27
ECHDC1-213ENST00000474240 ERVH48-1M5A8F1 160 aa7.08□□□□□ -1.28
ECHDC1-213ENST00000474240 SKIV2LQ15477 1246 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-213ENST00000474240 IL27Q8NEV9 243 aa7.08□□□□□ -1.28
ECHDC1-213ENST00000474240 ADAM32Q8TC27 787 aa7.08□□□□□ -1.28
ECHDC1-213ENST00000474240 PCMTD1Q96MG8 357 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-213ENST00000474240 GAS2L1Q99501 681 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-213ENST00000474240 SHISA8B8ZZ34 492 aa7.07□□□□□ -1.28
ECHDC1-213ENST00000474240 CTDSPL2Q05D32 466 aa7.07□□□□□ -1.28
ECHDC1-213ENST00000474240 GRIN2CQ14957 1233 aa7.07□□□□□ -1.28
ECHDC1-213ENST00000474240 LRRN4Q8WUT4 740 aa7.07□□□□□ -1.28
ECHDC1-213ENST00000474240 OXCT2Q9BYC2 517 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-213ENST00000474240 RRAGCQ9HB90 399 aa7.07□□□□□ -1.28
ECHDC1-213ENST00000474240 CYLDQ9NQC7 956 aa7.07□□□□□ -1.28
ECHDC1-213ENST00000474240 LRRC4BQ9NT99 713 aa7.07□□□□□ -1.28
ECHDC1-213ENST00000474240 MKL2Q9ULH7 1088 aa7.07□□□□□ -1.28
ECHDC1-213ENST00000474240 CLK2P49760 499 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-213ENST00000474240 RNF144AP50876 292 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-213ENST00000474240 NSFL1CQ9UNZ2 370 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-213ENST00000474240 H7C1W4 665 aa7.05□□□□□ -1.28
ECHDC1-213ENST00000474240 NR6A1Q15406 480 aa7.05□□□□□ -1.28
ECHDC1-213ENST00000474240 ZC3H4Q9UPT8 1303 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-213ENST00000474240 MEN1O00255 615 aa7.04□□□□□ -1.28
ECHDC1-213ENST00000474240 PTK2Q05397 1052 aa7.04□□□□□ -1.28
ECHDC1-213ENST00000474240 DYRK1BQ9Y463 629 aa7.04□□□□□ -1.28
ECHDC1-213ENST00000474240 ITGB7P26010 798 aa7.03□□□□□ -1.28
ECHDC1-213ENST00000474240 C1orf229Q6ZS94 237 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-213ENST00000474240 ALYREFQ86V81 257 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-213ENST00000474240 SUV39H2Q9H5I1 410 aa7.03□□□□□ -1.28
ECHDC1-213ENST00000474240 MAP2K3P46734 347 aa7.02□□□□□ -1.29
ECHDC1-213ENST00000474240 POU4F2Q12837 409 aa7.02□□□□□ -1.29
ECHDC1-213ENST00000474240 DZIP3Q86Y13 1208 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-213ENST00000474240 NUCKS1Q9H1E3 243 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-213ENST00000474240 C1QTNF9BB2RNN3 333 aa7.01□□□□□ -1.29
ECHDC1-213ENST00000474240 ATP5J2-PTCD1G3V325 749 aa7.01□□□□□ -1.29
ECHDC1-213ENST00000474240 LCE3BQ5TA77 95 aa7.01□□□□□ -1.29
ECHDC1-213ENST00000474240 ATP1B4Q9UN42 357 aaPredicted RBP7.01□□□□□ -1.29
ECHDC1-213ENST00000474240 ESPNB1AK53 854 aa7□□□□□ -1.29
ECHDC1-213ENST00000474240 SLC27A3Q5K4L6 730 aa7□□□□□ -1.29
ECHDC1-213ENST00000474240 CD163Q86VB7 1156 aa7□□□□□ -1.29
ECHDC1-213ENST00000474240 GNL3Q9BVP2 549 aaKnown RBP eCLIP7□□□□□ -1.29
ECHDC1-213ENST00000474240 POLR3EQ9NVU0 708 aa7□□□□□ -1.29
ECHDC1-213ENST00000474240 GPC1P35052 558 aa6.99□□□□□ -1.29
ECHDC1-213ENST00000474240 CHRNA4P43681 627 aa6.99□□□□□ -1.29
ECHDC1-213ENST00000474240 ZMYM1Q5SVZ6 1142 aa6.99□□□□□ -1.29
ECHDC1-213ENST00000474240 NBPF10Q6P3W6 841 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-213ENST00000474240 NBPF15Q8N660 670 aa6.99□□□□□ -1.29
ECHDC1-213ENST00000474240 SEMA6BQ9H3T3 888 aa6.99□□□□□ -1.29
ECHDC1-213ENST00000474240 GPSM3Q9Y4H4 160 aa6.99□□□□□ -1.29
ECHDC1-213ENST00000474240 A0A1W2PRU2 124 aa6.98□□□□□ -1.29
ECHDC1-213ENST00000474240 THBS1P07996 1170 aa6.98□□□□□ -1.29
ECHDC1-213ENST00000474240 AMPD1P23109 780 aa6.98□□□□□ -1.29
ECHDC1-213ENST00000474240 PPP2R2DQ66LE6 453 aa6.98□□□□□ -1.29
ECHDC1-213ENST00000474240 EDARADDQ8WWZ3 215 aa6.98□□□□□ -1.29
ECHDC1-213ENST00000474240 KLRG1Q96E93 195 aa6.98□□□□□ -1.29
ECHDC1-213ENST00000474240 HOXB4P17483 251 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-213ENST00000474240 KRTAP4-12Q9BQ66 201 aa6.97□□□□□ -1.29
ECHDC1-213ENST00000474240 TIMMDC1Q9NPL8 285 aa6.97□□□□□ -1.29
ECHDC1-213ENST00000474240 GDF2Q9UK05 429 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-213ENST00000474240 APBB1O00213 710 aa6.96□□□□□ -1.3
ECHDC1-213ENST00000474240 DOC2BQ14184 412 aa6.96□□□□□ -1.3
ECHDC1-213ENST00000474240 TMEM259Q4ZIN3 620 aa6.96□□□□□ -1.3
ECHDC1-213ENST00000474240 LINC00114Q6XXX2 140 aa6.96□□□□□ -1.3
ECHDC1-213ENST00000474240 EPS8L1Q8TE68 723 aa6.96□□□□□ -1.3
ECHDC1-213ENST00000474240 NLRP3Q96P20 1036 aa6.96□□□□□ -1.3
ECHDC1-213ENST00000474240 GPAMQ9HCL2 828 aa6.96□□□□□ -1.3
ECHDC1-213ENST00000474240 GOLGA6L1Q8N7Z2 621 aa6.95□□□□□ -1.3
ECHDC1-213ENST00000474240 SCO2A0A1W2PP80 73 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms