RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 U2AF1L5P0DN76 240 aaPredicted RBP13.88□□□□□ -0.19
CASC3-204ENST00000474190 U2AF1Q01081 240 aaKnown RBP eCLIP13.88□□□□□ -0.19
CASC3-204ENST00000474190 SEPT12Q8IYM1 358 aa13.88□□□□□ -0.19
CASC3-204ENST00000474190 PLEKHG2Q9H7P9 1386 aa13.87□□□□□ -0.19
CASC3-204ENST00000474190 CYP27B1O15528 508 aa13.87□□□□□ -0.19
CASC3-204ENST00000474190 PRKAR2BP31323 418 aa13.87□□□□□ -0.19
CASC3-204ENST00000474190 NUDCQ9Y266 331 aa13.87□□□□□ -0.19
CASC3-204ENST00000474190 CCDC9Q9Y3X0 531 aaKnown RBP13.87□□□□□ -0.19
CASC3-204ENST00000474190 MARCH10Q8NA82 808 aaPredicted RBP13.86□□□□□ -0.19
CASC3-204ENST00000474190 TNS2Q63HR2 1409 aa13.85□□□□□ -0.19
CASC3-204ENST00000474190 MTHFSDQ2M296 383 aaKnown RBP13.85□□□□□ -0.19
CASC3-204ENST00000474190 CDCA7Q9BWT1 371 aaPredicted RBP13.85□□□□□ -0.19
CASC3-204ENST00000474190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.85□□□□□ -0.196e-8■■□□□ 12.7
CASC3-204ENST00000474190 LRRC37A3O60309 1634 aa13.84□□□□□ -0.19
CASC3-204ENST00000474190 TATP17735 454 aaPredicted RBP13.83□□□□□ -0.2
CASC3-204ENST00000474190 ZCRB1Q8TBF4 217 aaKnown RBP13.83□□□□□ -0.2
CASC3-204ENST00000474190 RAPGEF4Q8WZA2 1011 aa13.83□□□□□ -0.2
CASC3-204ENST00000474190 WNK3Q9BYP7 1800 aa13.83□□□□□ -0.2
CASC3-204ENST00000474190 SHANK3Q9BYB0 1731 aa13.82□□□□□ -0.2
CASC3-204ENST00000474190 PARP4Q9UKK3 1724 aaKnown RBP13.82□□□□□ -0.2
CASC3-204ENST00000474190 NKX1-1Q15270 411 aaPredicted RBP13.82□□□□□ -0.2
CASC3-204ENST00000474190 FAM182BQ5T319 152 aa13.82□□□□□ -0.2
CASC3-204ENST00000474190 CCDC146Q8IYE0 955 aa13.82□□□□□ -0.2
CASC3-204ENST00000474190 PKD1L3Q7Z443 1732 aa13.81□□□□□ -0.2
CASC3-204ENST00000474190 PHKG2P15735 406 aa13.81□□□□□ -0.2
CASC3-204ENST00000474190 DDB1Q16531 1140 aa13.81□□□□□ -0.2
CASC3-204ENST00000474190 BCL9O00512 1426 aa13.81□□□□□ -0.2
CASC3-204ENST00000474190 KDM6AO15550 1401 aaPredicted RBP13.81□□□□□ -0.2
CASC3-204ENST00000474190 BRWD3Q6RI45 1802 aa13.8□□□□□ -0.2
CASC3-204ENST00000474190 EXOC5O00471 708 aa13.8□□□□□ -0.2
CASC3-204ENST00000474190 WDR43Q15061 677 aaKnown RBP eCLIP13.8□□□□□ -0.2
CASC3-204ENST00000474190 PTF1AQ7RTS3 328 aa13.8□□□□□ -0.2
CASC3-204ENST00000474190 CCDC125Q86Z20 511 aa13.8□□□□□ -0.2
CASC3-204ENST00000474190 RUNDC1Q96C34 613 aa13.8□□□□□ -0.2
CASC3-204ENST00000474190 AMOTQ4VCS5 1084 aa13.79□□□□□ -0.2
CASC3-204ENST00000474190 PLEKHO1Q53GL0 409 aaPredicted RBP13.79□□□□□ -0.2
CASC3-204ENST00000474190 FAM9BQ8IZU0 186 aa13.79□□□□□ -0.2
CASC3-204ENST00000474190 TMPOP42166 694 aaKnown RBP13.78□□□□□ -0.2
CASC3-204ENST00000474190 ZNF530Q6P9A1 599 aaPredicted RBP13.78□□□□□ -0.2
CASC3-204ENST00000474190 KRT27Q7Z3Y8 459 aa13.78□□□□□ -0.2
CASC3-204ENST00000474190 IL17REQ8NFR9 667 aa13.78□□□□□ -0.2
CASC3-204ENST00000474190 LGR6Q9HBX8 967 aa13.78□□□□□ -0.2
CASC3-204ENST00000474190 TRIM35Q9UPQ4 493 aa13.78□□□□□ -0.2
CASC3-204ENST00000474190 PCDH11XQ9BZA7 1347 aa13.78□□□□□ -0.2
CASC3-204ENST00000474190 PCDH11YQ9BZA8 1340 aa13.78□□□□□ -0.2
CASC3-204ENST00000474190 SENP3-EIF4A1A0A087X0R7 540 aa13.77□□□□□ -0.21
CASC3-204ENST00000474190 APAF1O14727 1248 aa13.77□□□□□ -0.21
CASC3-204ENST00000474190 NFE2L2Q16236 605 aa13.77□□□□□ -0.21
CASC3-204ENST00000474190 DEFB132Q7Z7B7 95 aa13.77□□□□□ -0.21
CASC3-204ENST00000474190 DDX54Q8TDD1 881 aaKnown RBP13.77□□□□□ -0.21
CASC3-204ENST00000474190 CEMIPQ8WUJ3 1361 aa13.77□□□□□ -0.21
CASC3-204ENST00000474190 SPG7Q9UQ90 795 aa13.77□□□□□ -0.21
CASC3-204ENST00000474190 RRP7AQ9Y3A4 280 aaKnown RBP13.77□□□□□ -0.21
CASC3-204ENST00000474190 AKAP4Q5JQC9 854 aa13.76□□□□□ -0.21
CASC3-204ENST00000474190 ADAMTS7Q9UKP4 1686 aa13.75□□□□□ -0.21
CASC3-204ENST00000474190 KCNQ2O43526 872 aa13.75□□□□□ -0.21
CASC3-204ENST00000474190 IFNL2Q8IZJ0 200 aa13.75□□□□□ -0.21
CASC3-204ENST00000474190 GAS2L2Q8NHY3 880 aa13.75□□□□□ -0.21
CASC3-204ENST00000474190 MAP3K5Q99683 1374 aa13.74□□□□□ -0.21
CASC3-204ENST00000474190 ZNF521Q96K83 1311 aa13.74□□□□□ -0.21
CASC3-204ENST00000474190 RNMTO43148 476 aaKnown RBP13.74□□□□□ -0.21
CASC3-204ENST00000474190 PDE3BQ13370 1112 aa13.74□□□□□ -0.21
CASC3-204ENST00000474190 DCTN1Q14203 1278 aa13.74□□□□□ -0.21
CASC3-204ENST00000474190 MPRIPQ6WCQ1 1025 aa13.74□□□□□ -0.21
CASC3-204ENST00000474190 A0A0G2JS52 829 aa13.73□□□□□ -0.21
CASC3-204ENST00000474190 MYT1Q01538 1121 aa13.73□□□□□ -0.21
CASC3-204ENST00000474190 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
CASC3-204ENST00000474190 DCAF5Q96JK2 942 aa13.73□□□□□ -0.21
CASC3-204ENST00000474190 THUMPD2Q9BTF0 503 aaKnown RBP13.73□□□□□ -0.21
CASC3-204ENST00000474190 MRC1P22897 1456 aa13.73□□□□□ -0.21
CASC3-204ENST00000474190 TOGARAM1Q9Y4F4 1720 aa13.73□□□□□ -0.21
CASC3-204ENST00000474190 GNAT3A8MTJ3 354 aa13.72□□□□□ -0.21
CASC3-204ENST00000474190 RIPK4P57078 832 aa13.72□□□□□ -0.21
CASC3-204ENST00000474190 MCM10Q7L590 875 aa13.72□□□□□ -0.21
CASC3-204ENST00000474190 PSDA5PKW4 1024 aaPredicted RBP13.71□□□□□ -0.21
CASC3-204ENST00000474190 HTATSF1O43719 755 aaKnown RBP13.71□□□□□ -0.21
CASC3-204ENST00000474190 PRIM1P49642 420 aaKnown RBP13.71□□□□□ -0.21
CASC3-204ENST00000474190 PNNQ9H307 717 aaKnown RBP13.71□□□□□ -0.21
CASC3-204ENST00000474190 MAPK8IP3Q9UPT6 1336 aa13.7□□□□□ -0.22
CASC3-204ENST00000474190 CCDC27Q2M243 656 aa13.7□□□□□ -0.22
CASC3-204ENST00000474190 FAM196AQ6ZSG2 479 aa13.7□□□□□ -0.22
CASC3-204ENST00000474190 PIGBQ92521 554 aa13.7□□□□□ -0.22
CASC3-204ENST00000474190 ACSBG1Q96GR2 724 aa13.7□□□□□ -0.22
CASC3-204ENST00000474190 ERVV-2B6SEH9 535 aa13.69□□□□□ -0.22
CASC3-204ENST00000474190 NEUROD2Q15784 382 aa13.69□□□□□ -0.22
CASC3-204ENST00000474190 C1orf141Q5JVX7 400 aa13.69□□□□□ -0.22
CASC3-204ENST00000474190 WWC1Q8IX03 1113 aa13.69□□□□□ -0.22
CASC3-204ENST00000474190 SLC52A2Q9HAB3 445 aa13.69□□□□□ -0.22
CASC3-204ENST00000474190 SPINK5Q9NQ38 1064 aaPredicted RBP13.69□□□□□ -0.22
CASC3-204ENST00000474190 HSP90AB1P08238 724 aaKnown RBP13.68□□□□□ -0.22
CASC3-204ENST00000474190 ZNF853P0CG23 659 aa13.68□□□□□ -0.22
CASC3-204ENST00000474190 TRIM37O94972 964 aa13.67□□□□□ -0.22
CASC3-204ENST00000474190 NFATC2IPQ8NCF5 419 aa13.67□□□□□ -0.22
CASC3-204ENST00000474190 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
CASC3-204ENST00000474190 KCNQ3O43525 872 aa13.66□□□□□ -0.22
CASC3-204ENST00000474190 SF3B2Q13435 895 aaKnown RBP13.66□□□□□ -0.22
CASC3-204ENST00000474190 SLC4A9Q96Q91 983 aa13.66□□□□□ -0.22
CASC3-204ENST00000474190 PROM2Q8N271 834 aa13.65□□□□□ -0.22
CASC3-204ENST00000474190 ATG3Q9NT62 314 aa13.65□□□□□ -0.22
CASC3-204ENST00000474190 ASAP1Q9ULH1 1129 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms