RNA–Protein interactions for RNA: ENST00000473809.5

ATP5C1-208, Transcript of ATP synthase subunit gamma, mitochondrial, human

TSL 2

Gene ATP5C1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP5C1-208	ENST00000473809	ERBB4	Q15303	1308 aa		6.6	□□□□□ -1.35
ATP5C1-208	ENST00000473809	BMP1	P13497	986 aa		6.6	□□□□□ -1.35
ATP5C1-208	ENST00000473809	NCOA4	Q13772	614 aa		6.6	□□□□□ -1.35
ATP5C1-208	ENST00000473809	RC3H1	Q5TC82	1133 aa	Known RBP	6.6	□□□□□ -1.35
ATP5C1-208	ENST00000473809	RNF135	Q8IUD6	432 aa		6.6	□□□□□ -1.35
ATP5C1-208	ENST00000473809	SLAIN2	Q9P270	581 aa		6.6	□□□□□ -1.35
ATP5C1-208	ENST00000473809	SIAH2	O43255	324 aa		6.59	□□□□□ -1.35
ATP5C1-208	ENST00000473809	PDIA4	P13667	645 aa	Known RBP	6.59	□□□□□ -1.35
ATP5C1-208	ENST00000473809	RASSF7	Q02833	373 aa		6.59	□□□□□ -1.35
ATP5C1-208	ENST00000473809	SLFNL1	Q499Z3	407 aa		6.59	□□□□□ -1.35
ATP5C1-208	ENST00000473809	CRTC2	Q53ET0	693 aa	Predicted RBP	6.59	□□□□□ -1.35
ATP5C1-208	ENST00000473809	DZIP3	Q86Y13	1208 aa	Known RBP	6.59	□□□□□ -1.35
ATP5C1-208	ENST00000473809	VRTN	Q9H8Y1	702 aa		6.59	□□□□□ -1.35
ATP5C1-208	ENST00000473809	ZBTB7B	O15156	539 aa	Predicted RBP	6.58	□□□□□ -1.36
ATP5C1-208	ENST00000473809	IGHA1	P01876	353 aa		6.58	□□□□□ -1.36
ATP5C1-208	ENST00000473809	GRM5	P41594	1212 aa		6.58	□□□□□ -1.36
ATP5C1-208	ENST00000473809	CLDN10	P78369	228 aa		6.58	□□□□□ -1.36
ATP5C1-208	ENST00000473809	PTK7	Q13308	1070 aa		6.58	□□□□□ -1.36
ATP5C1-208	ENST00000473809	ELOA	Q14241	798 aa	Known RBP	6.58	□□□□□ -1.36
ATP5C1-208	ENST00000473809	STK32A	Q8WU08	396 aa		6.58	□□□□□ -1.36
ATP5C1-208	ENST00000473809	MKRN1	Q9UHC7	482 aa	Known RBP	6.58	□□□□□ -1.36
ATP5C1-208	ENST00000473809	ACIN1	Q9UKV3	1341 aa	Known RBP	6.57	□□□□□ -1.36
ATP5C1-208	ENST00000473809	FAM69C	Q0P6D2	419 aa		6.57	□□□□□ -1.36
ATP5C1-208	ENST00000473809	SCARF1	Q14162	830 aa		6.57	□□□□□ -1.36
ATP5C1-208	ENST00000473809	AGER	Q15109	404 aa		6.57	□□□□□ -1.36
ATP5C1-208	ENST00000473809	CDK15	Q96Q40	435 aa		6.57	□□□□□ -1.36
ATP5C1-208	ENST00000473809	KIAA1024	Q9UPX6	916 aa		6.57	□□□□□ -1.36
ATP5C1-208	ENST00000473809	VARS	P26640	1264 aa	Known RBP	6.56	□□□□□ -1.36
ATP5C1-208	ENST00000473809	MAP7D1	Q3KQU3	841 aa		6.56	□□□□□ -1.36
ATP5C1-208	ENST00000473809	MAP4K5	Q9Y4K4	846 aa		6.56	□□□□□ -1.36
ATP5C1-208	ENST00000473809	PCDHGA11	Q9Y5H2	935 aa		6.56	□□□□□ -1.36
ATP5C1-208	ENST00000473809	FAM196B	A6NMK8	535 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	USP17L15	C9J2P7	530 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	USP17L10	C9JJH3	530 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	USP17L13	C9JLJ4	530 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	USP17L12	C9JPN9	530 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	USP17L11	C9JVI0	530 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	USP17L21	D6R901	530 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	USP17L18	D6R9N7	530 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	USP17L22	D6RA61	530 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	USP17L17	D6RBQ6	530 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	USP17L19	D6RCP7	530 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	USP17L20	D6RJB6	530 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	LZTS3	O60299	673 aa	Predicted RBP	6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	USP17L24	Q0WX57	530 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	INTS6L	Q5JSJ4	861 aa	Known RBP	6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	TMEM164	Q5U3C3	297 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	GPAT2	Q6NUI2	795 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	EHBP1	Q8NDI1	1231 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	SLC10A4	Q96EP9	437 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	KCTD15	Q96SI1	283 aa	Predicted RBP	6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	UST	Q9Y2C2	406 aa		6.55	□□□□□ -1.36
ATP5C1-208	ENST00000473809	SCTR	P47872	440 aa		6.54	□□□□□ -1.36
ATP5C1-208	ENST00000473809	PHLDB3	Q6NSJ2	640 aa		6.54	□□□□□ -1.36
ATP5C1-208	ENST00000473809	TRIM46	Q7Z4K8	759 aa		6.54	□□□□□ -1.36
ATP5C1-208	ENST00000473809	MPND	Q8N594	471 aa		6.54	□□□□□ -1.36
ATP5C1-208	ENST00000473809	ZNF592	Q92610	1267 aa		6.54	□□□□□ -1.36
ATP5C1-208	ENST00000473809	ZFP42	Q96MM3	310 aa		6.54	□□□□□ -1.36
ATP5C1-208	ENST00000473809	NOVA2	Q9UNW9	492 aa	Known RBP	6.54	□□□□□ -1.36
ATP5C1-208	ENST00000473809	DOLK	Q9UPQ8	538 aa		6.54	□□□□□ -1.36
ATP5C1-208	ENST00000473809	TLL2	Q9Y6L7	1015 aa		6.54	□□□□□ -1.36
ATP5C1-208	ENST00000473809	ERVH48-1	M5A8F1	160 aa		6.53	□□□□□ -1.36
ATP5C1-208	ENST00000473809	FOXK2	Q01167	660 aa		6.53	□□□□□ -1.36
ATP5C1-208	ENST00000473809	SEPT12	Q8IYM1	358 aa		6.53	□□□□□ -1.36
ATP5C1-208	ENST00000473809	OGFOD1	Q8N543	542 aa		6.53	□□□□□ -1.36
ATP5C1-208	ENST00000473809	ATP5J2-PTCD1	G3V325	749 aa		6.52	□□□□□ -1.37
ATP5C1-208	ENST00000473809	VSIG8	P0DPA2	414 aa		6.52	□□□□□ -1.37
ATP5C1-208	ENST00000473809	RASA1	P20936	1047 aa		6.52	□□□□□ -1.37
ATP5C1-208	ENST00000473809	EML3	Q32P44	896 aa		6.52	□□□□□ -1.37
ATP5C1-208	ENST00000473809	NBPF20	Q3BBV1	942 aa		6.52	□□□□□ -1.37
ATP5C1-208	ENST00000473809	OXLD1	Q5BKU9	147 aa		6.52	□□□□□ -1.37
ATP5C1-208	ENST00000473809	TMPRSS4	Q9NRS4	437 aa		6.52	□□□□□ -1.37
ATP5C1-208	ENST00000473809	CDV3	Q9UKY7	258 aa	Known RBP	6.52	□□□□□ -1.37
ATP5C1-208	ENST00000473809	NR3C2	P08235	984 aa		6.51	□□□□□ -1.37
ATP5C1-208	ENST00000473809	CSB-PGBD3	P0DP91	1061 aa		6.51	□□□□□ -1.37
ATP5C1-208	ENST00000473809	VASH1	Q7L8A9	365 aa	Predicted RBP	6.51	□□□□□ -1.37
ATP5C1-208	ENST00000473809	ANKMY2	Q8IV38	441 aa		6.51	□□□□□ -1.37
ATP5C1-208	ENST00000473809	SIX5	Q8N196	739 aa		6.51	□□□□□ -1.37
ATP5C1-208	ENST00000473809	PCDHB11	Q9Y5F2	797 aa		6.51	□□□□□ -1.37
ATP5C1-208	ENST00000473809	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	6.51	□□□□□ -1.37
ATP5C1-208	ENST00000473809	LILRA1	O75019	489 aa		6.5	□□□□□ -1.37
ATP5C1-208	ENST00000473809	STAU1	O95793	577 aa	Known RBP	6.5	□□□□□ -1.37
ATP5C1-208	ENST00000473809	ERVK-9	P63128	1117 aa		6.5	□□□□□ -1.37
ATP5C1-208	ENST00000473809	GTF2I	P78347	998 aa		6.5	□□□□□ -1.37
ATP5C1-208	ENST00000473809	DPYD	Q12882	1025 aa		6.5	□□□□□ -1.37
ATP5C1-208	ENST00000473809	RNF20	Q5VTR2	975 aa		6.5	□□□□□ -1.37
ATP5C1-208	ENST00000473809	DNAAF2	Q9NVR5	837 aa	Known RBP	6.5	□□□□□ -1.37
ATP5C1-208	ENST00000473809	NOD1	Q9Y239	953 aa		6.5	□□□□□ -1.37
ATP5C1-208	ENST00000473809	FSHR	P23945	695 aa		6.49	□□□□□ -1.37
ATP5C1-208	ENST00000473809	ADD1	P35611	737 aa	Known RBP	6.49	□□□□□ -1.37
ATP5C1-208	ENST00000473809	RAB15	P59190	212 aa		6.49	□□□□□ -1.37
ATP5C1-208	ENST00000473809	XP32	Q5T750	250 aa		6.49	□□□□□ -1.37
ATP5C1-208	ENST00000473809	AEBP1	Q8IUX7	1158 aa		6.49	□□□□□ -1.37
ATP5C1-208	ENST00000473809	LARGE2	Q8N3Y3	721 aa		6.49	□□□□□ -1.37
ATP5C1-208	ENST00000473809	ZNF594	Q96JF6	807 aa	Predicted RBP	6.49	□□□□□ -1.37
ATP5C1-208	ENST00000473809	OSBPL3	Q9H4L5	887 aa		6.49	□□□□□ -1.37
ATP5C1-208	ENST00000473809	PODXL2	Q9NZ53	605 aa		6.49	□□□□□ -1.37
ATP5C1-208	ENST00000473809	ADAMTS8	Q9UP79	889 aa		6.49	□□□□□ -1.37
ATP5C1-208	ENST00000473809	TMEM229A	B2RXF0	380 aa		6.48	□□□□□ -1.37
ATP5C1-208	ENST00000473809	MAN1A2	O60476	641 aa		6.48	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms