RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 ANKRD24Q8TF21 1146 aa19.28■□□□□ 0.68
LMNA-213ENST00000473598 FAM208AQ9UK61 1670 aaKnown RBP19.28■□□□□ 0.68
LMNA-213ENST00000473598 WDR63Q8IWG1 891 aa19.27■□□□□ 0.67
LMNA-213ENST00000473598 TRIM35Q9UPQ4 493 aa19.27■□□□□ 0.67
LMNA-213ENST00000473598 ERBB3P21860 1342 aa19.26■□□□□ 0.67
LMNA-213ENST00000473598 SLFN5Q08AF3 891 aa19.26■□□□□ 0.67
LMNA-213ENST00000473598 NBPF6Q5VWK0 638 aa19.26■□□□□ 0.67
LMNA-213ENST00000473598 NBPF4Q96M43 638 aa19.26■□□□□ 0.67
LMNA-213ENST00000473598 NRAPQ86VF7 1730 aa19.26■□□□□ 0.67
LMNA-213ENST00000473598 NWD2Q9ULI1 1742 aa19.26■□□□□ 0.67
LMNA-213ENST00000473598 UNC5CLQ8IV45 518 aa19.25■□□□□ 0.67
LMNA-213ENST00000473598 STRN4Q9NRL3 753 aa19.25■□□□□ 0.67
LMNA-213ENST00000473598 ZNF772Q68DY9 489 aaPredicted RBP19.25■□□□□ 0.67
LMNA-213ENST00000473598 QTRT2Q9H974 415 aaKnown RBP19.25■□□□□ 0.67
LMNA-213ENST00000473598 NCAPD2Q15021 1401 aa19.24■□□□□ 0.67
LMNA-213ENST00000473598 E9PSI1 815 aa19.24■□□□□ 0.67
LMNA-213ENST00000473598 TRMT2AQ8IZ69 625 aaKnown RBP19.24■□□□□ 0.67
LMNA-213ENST00000473598 SPINK5Q9NQ38 1064 aaPredicted RBP19.24■□□□□ 0.67
LMNA-213ENST00000473598 DUSP27Q5VZP5 1158 aa19.24■□□□□ 0.67
LMNA-213ENST00000473598 USHBP1Q8N6Y0 703 aa19.23■□□□□ 0.67
LMNA-213ENST00000473598 COL5A2P05997 1499 aaPredicted RBP19.23■□□□□ 0.67
LMNA-213ENST00000473598 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.22■□□□□ 0.67
LMNA-213ENST00000473598 ATRNO75882 1429 aa19.21■□□□□ 0.67
LMNA-213ENST00000473598 IRX6P78412 446 aaPredicted RBP19.21■□□□□ 0.67
LMNA-213ENST00000473598 TRPC5Q9UL62 973 aaPredicted RBP19.21■□□□□ 0.67
LMNA-213ENST00000473598 LARP1Q6PKG0 1096 aaKnown RBP19.2■□□□□ 0.66
LMNA-213ENST00000473598 EVA1CP58658 441 aa19.2■□□□□ 0.66
LMNA-213ENST00000473598 LMOD3Q0VAK6 560 aa19.2■□□□□ 0.66
LMNA-213ENST00000473598 CCDC136Q96JN2 1154 aa19.2■□□□□ 0.66
LMNA-213ENST00000473598 CCDC9Q9Y3X0 531 aaKnown RBP19.2■□□□□ 0.66
LMNA-213ENST00000473598 MTHFSDQ2M296 383 aaKnown RBP19.19■□□□□ 0.66
LMNA-213ENST00000473598 IL16Q14005 1332 aa19.19■□□□□ 0.66
LMNA-213ENST00000473598 VPS72Q15906 364 aa19.18■□□□□ 0.66
LMNA-213ENST00000473598 USP35Q9P2H5 1018 aa19.18■□□□□ 0.66
LMNA-213ENST00000473598 GAS2L2Q8NHY3 880 aa19.18■□□□□ 0.66
LMNA-213ENST00000473598 GLI3P10071 1580 aa19.17■□□□□ 0.66
LMNA-213ENST00000473598 CSB-PGBD3P0DP91 1061 aa19.17■□□□□ 0.66
LMNA-213ENST00000473598 GJD4Q96KN9 370 aaPredicted RBP19.17■□□□□ 0.66
LMNA-213ENST00000473598 EIF5BO60841 1220 aaKnown RBP19.17■□□□□ 0.66
LMNA-213ENST00000473598 NLRP2Q9NX02 1062 aa19.17■□□□□ 0.66
LMNA-213ENST00000473598 RNF123Q5XPI4 1314 aa19.16■□□□□ 0.66
LMNA-213ENST00000473598 MYH16Q9H6N6 1097 aa19.16■□□□□ 0.66
LMNA-213ENST00000473598 CALD1Q05682 793 aaKnown RBP19.15■□□□□ 0.66
LMNA-213ENST00000473598 RXRBP28702 533 aa19.15■□□□□ 0.66
LMNA-213ENST00000473598 SPATA31A5Q5VU36 1347 aa19.15■□□□□ 0.66
LMNA-213ENST00000473598 SPATA31A7Q8IWB4 1347 aa19.15■□□□□ 0.66
LMNA-213ENST00000473598 WDR17Q8IZU2 1322 aa19.15■□□□□ 0.66
LMNA-213ENST00000473598 RBM6P78332 1123 aaKnown RBP19.14■□□□□ 0.65
LMNA-213ENST00000473598 TOM1L2Q6ZVM7 507 aa19.14■□□□□ 0.65
LMNA-213ENST00000473598 RCAN3Q9UKA8 241 aa19.14■□□□□ 0.65
LMNA-213ENST00000473598 THUMPD2Q9BTF0 503 aaKnown RBP19.13■□□□□ 0.65
LMNA-213ENST00000473598 SPATA31A1Q5TZJ5 1347 aa19.13■□□□□ 0.65
LMNA-213ENST00000473598 CRB1P82279 1406 aa19.13■□□□□ 0.65
LMNA-213ENST00000473598 ILDR2Q71H61 639 aa19.13■□□□□ 0.65
LMNA-213ENST00000473598 NOP58Q9Y2X3 529 aaKnown RBP19.13■□□□□ 0.65
LMNA-213ENST00000473598 DCTN1Q14203 1278 aa19.12■□□□□ 0.65
LMNA-213ENST00000473598 VIRMAQ69YN4 1812 aaKnown RBP19.12■□□□□ 0.65
LMNA-213ENST00000473598 HTATSF1O43719 755 aaKnown RBP19.12■□□□□ 0.65
LMNA-213ENST00000473598 FAM98CQ17RN3 349 aaKnown RBP19.12■□□□□ 0.65
LMNA-213ENST00000473598 AMOTQ4VCS5 1084 aa19.12■□□□□ 0.65
LMNA-213ENST00000473598 PLEKHO1Q53GL0 409 aaPredicted RBP19.11■□□□□ 0.65
LMNA-213ENST00000473598 PPP4R2Q9NY27 417 aa19.11■□□□□ 0.65
LMNA-213ENST00000473598 LRRC37A3O60309 1634 aa19.1■□□□□ 0.65
LMNA-213ENST00000473598 MAP3K5Q99683 1374 aa19.1■□□□□ 0.65
LMNA-213ENST00000473598 PLEKHG2Q9H7P9 1386 aa19.1■□□□□ 0.65
LMNA-213ENST00000473598 GNAT3A8MTJ3 354 aa19.1■□□□□ 0.65
LMNA-213ENST00000473598 RTF1Q92541 710 aaKnown RBP19.1■□□□□ 0.65
LMNA-213ENST00000473598 MCM10Q7L590 875 aa19.1■□□□□ 0.65
LMNA-213ENST00000473598 RAPGEF4Q8WZA2 1011 aa19.1■□□□□ 0.65
LMNA-213ENST00000473598 TSR2Q969E8 191 aaKnown RBP19.1■□□□□ 0.65
LMNA-213ENST00000473598 IFT57Q9NWB7 429 aa19.1■□□□□ 0.65
LMNA-213ENST00000473598 RGS12O14924 1447 aa19.09■□□□□ 0.65
LMNA-213ENST00000473598 ZNF853P0CG23 659 aa19.09■□□□□ 0.65
LMNA-213ENST00000473598 GNAI1P63096 354 aa19.09■□□□□ 0.65
LMNA-213ENST00000473598 PARP4Q9UKK3 1724 aaKnown RBP19.09■□□□□ 0.65
LMNA-213ENST00000473598 MEGF6O75095 1541 aa19.09■□□□□ 0.65
LMNA-213ENST00000473598 EP400Q96L91 3159 aa19.09■□□□□ 0.65
LMNA-213ENST00000473598 PKD1L3Q7Z443 1732 aa19.09■□□□□ 0.65
LMNA-213ENST00000473598 TATP17735 454 aaPredicted RBP19.08■□□□□ 0.64
LMNA-213ENST00000473598 CFAP44Q96MT7 982 aa19.08■□□□□ 0.64
LMNA-213ENST00000473598 LAS1LQ9Y4W2 734 aaKnown RBP19.08■□□□□ 0.64
LMNA-213ENST00000473598 CARD10Q9BWT7 1032 aa19.07■□□□□ 0.64
LMNA-213ENST00000473598 A0A0G2JS52 829 aa19.07■□□□□ 0.64
LMNA-213ENST00000473598 AKAP4Q5JQC9 854 aa19.06■□□□□ 0.64
LMNA-213ENST00000473598 ZNF530Q6P9A1 599 aaPredicted RBP19.06■□□□□ 0.64
LMNA-213ENST00000473598 SEPT12Q8IYM1 358 aa19.05■□□□□ 0.64
LMNA-213ENST00000473598 PKNOX2Q96KN3 472 aa19.05■□□□□ 0.64
LMNA-213ENST00000473598 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.05■□□□□ 0.64
LMNA-213ENST00000473598 ONECUT3O60422 494 aaPredicted RBP19.04■□□□□ 0.64
LMNA-213ENST00000473598 EXOSC9Q06265 439 aaKnown RBP19.04■□□□□ 0.64
LMNA-213ENST00000473598 RTL5Q5HYW3 569 aaPredicted RBP19.04■□□□□ 0.64
LMNA-213ENST00000473598 IL27Q8NEV9 243 aa19.04■□□□□ 0.64
LMNA-213ENST00000473598 IL17REQ8NFR9 667 aa19.04■□□□□ 0.64
LMNA-213ENST00000473598 MBIPQ9NS73 344 aa19.04■□□□□ 0.64
LMNA-213ENST00000473598 CT47B1P0C2W7 299 aaPredicted RBP19.03■□□□□ 0.64
LMNA-213ENST00000473598 C1orf141Q5JVX7 400 aa19.03■□□□□ 0.64
LMNA-213ENST00000473598 BARGINQ6ZT62 677 aa19.03■□□□□ 0.64
LMNA-213ENST00000473598 SPG7Q9UQ90 795 aa19.03■□□□□ 0.64
LMNA-213ENST00000473598 ADAMTS7Q9UKP4 1686 aa19.03■□□□□ 0.64
LMNA-213ENST00000473598 OVOS2A0A0G2JMS6 1433 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms