RNA–Protein interactions for RNA: ENST00000472206.1

CTLA4-204, Transcript of cytotoxic T-lymphocyte associated protein 4, humanhuman

TSL 1 (best) BASIC

Gene CTLA4, Length 277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4-204ENST00000472206 PDE3AQ14432 1141 aa11.24□□□□□ -0.61
CTLA4-204ENST00000472206 ALDH1L2Q3SY69 923 aa11.24□□□□□ -0.61
CTLA4-204ENST00000472206 ANKRD24Q8TF21 1146 aa11.24□□□□□ -0.61
CTLA4-204ENST00000472206 PHACTR3Q96KR7 559 aa11.24□□□□□ -0.61
CTLA4-204ENST00000472206 PLCH1Q4KWH8 1693 aa11.24□□□□□ -0.61
CTLA4-204ENST00000472206 GNAT3A8MTJ3 354 aa11.23□□□□□ -0.61
CTLA4-204ENST00000472206 PLEKHO1Q53GL0 409 aaPredicted RBP11.23□□□□□ -0.61
CTLA4-204ENST00000472206 AEBP1Q8IUX7 1158 aa11.23□□□□□ -0.61
CTLA4-204ENST00000472206 KIAA0232Q92628 1395 aa11.23□□□□□ -0.61
CTLA4-204ENST00000472206 SENP3-EIF4A1A0A087X0R7 540 aa11.22□□□□□ -0.61
CTLA4-204ENST00000472206 ZNF853P0CG23 659 aa11.22□□□□□ -0.61
CTLA4-204ENST00000472206 CANXP27824 592 aaKnown RBP11.22□□□□□ -0.61
CTLA4-204ENST00000472206 HSPA1LP34931 641 aa11.22□□□□□ -0.61
CTLA4-204ENST00000472206 BRPF1P55201 1214 aaPredicted RBP11.22□□□□□ -0.61
CTLA4-204ENST00000472206 COL14A1Q05707 1796 aaKnown RBP11.22□□□□□ -0.61
CTLA4-204ENST00000472206 SPINK5Q9NQ38 1064 aaPredicted RBP11.22□□□□□ -0.61
CTLA4-204ENST00000472206 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.22□□□□□ -0.61
CTLA4-204ENST00000472206 ZBTB7CA1YPR0 619 aa11.21□□□□□ -0.61
CTLA4-204ENST00000472206 IPO8O15397 1037 aaKnown RBP11.21□□□□□ -0.61
CTLA4-204ENST00000472206 RARSP54136 660 aaKnown RBP11.21□□□□□ -0.61
CTLA4-204ENST00000472206 ZC3H6P61129 1189 aaKnown RBP11.21□□□□□ -0.61
CTLA4-204ENST00000472206 RAPGEF4Q8WZA2 1011 aa11.21□□□□□ -0.61
CTLA4-204ENST00000472206 CHMP4BQ9H444 224 aaKnown RBP11.21□□□□□ -0.61
CTLA4-204ENST00000472206 PRDM11Q9NQV5 511 aa11.21□□□□□ -0.61
CTLA4-204ENST00000472206 AKAP4Q5JQC9 854 aa11.2□□□□□ -0.62
CTLA4-204ENST00000472206 C1orf141Q5JVX7 400 aa11.2□□□□□ -0.62
CTLA4-204ENST00000472206 LTV1Q96GA3 475 aaPredicted RBP11.2□□□□□ -0.62
CTLA4-204ENST00000472206 NRAPQ86VF7 1730 aa11.2□□□□□ -0.62
CTLA4-204ENST00000472206 PARP4Q9UKK3 1724 aaKnown RBP11.2□□□□□ -0.62
CTLA4-204ENST00000472206 JCADQ9P266 1359 aa11.19□□□□□ -0.62
CTLA4-204ENST00000472206 CSB-PGBD3P0DP91 1061 aa11.19□□□□□ -0.62
CTLA4-204ENST00000472206 TATP17735 454 aaPredicted RBP11.19□□□□□ -0.62
CTLA4-204ENST00000472206 MTHFSDQ2M296 383 aaKnown RBP11.19□□□□□ -0.62
CTLA4-204ENST00000472206 NBPF6Q5VWK0 638 aa11.19□□□□□ -0.62
CTLA4-204ENST00000472206 NBPF4Q96M43 638 aa11.19□□□□□ -0.62
CTLA4-204ENST00000472206 SPG7Q9UQ90 795 aa11.19□□□□□ -0.62
CTLA4-204ENST00000472206 LRP6O75581 1613 aa11.19□□□□□ -0.62
CTLA4-204ENST00000472206 CRB1P82279 1406 aa11.18□□□□□ -0.62
CTLA4-204ENST00000472206 CEMIPQ8WUJ3 1361 aa11.18□□□□□ -0.62
CTLA4-204ENST00000472206 WDR17Q8IZU2 1322 aa11.18□□□□□ -0.62
CTLA4-204ENST00000472206 CHL1O00533 1208 aa11.18□□□□□ -0.62
CTLA4-204ENST00000472206 HSP90AB1P08238 724 aaKnown RBP11.18□□□□□ -0.62
CTLA4-204ENST00000472206 EXOSC9Q06265 439 aaKnown RBP11.18□□□□□ -0.62
CTLA4-204ENST00000472206 CHRNA2Q15822 529 aa11.18□□□□□ -0.62
CTLA4-204ENST00000472206 SMC4Q9NTJ3 1288 aa11.18□□□□□ -0.62
CTLA4-204ENST00000472206 AXIN2Q9Y2T1 843 aa11.18□□□□□ -0.62
CTLA4-204ENST00000472206 COL5A2P05997 1499 aaPredicted RBP11.18□□□□□ -0.62
CTLA4-204ENST00000472206 PKD1L3Q7Z443 1732 aa11.18□□□□□ -0.62
CTLA4-204ENST00000472206 NWD2Q9ULI1 1742 aa11.18□□□□□ -0.62
CTLA4-204ENST00000472206 ZKSCAN2Q63HK3 967 aa11.17□□□□□ -0.62
CTLA4-204ENST00000472206 TSR2Q969E8 191 aaKnown RBP11.17□□□□□ -0.62
CTLA4-204ENST00000472206 CCDC136Q96JN2 1154 aa11.17□□□□□ -0.62
CTLA4-204ENST00000472206 MBIPQ9NS73 344 aa11.17□□□□□ -0.62
CTLA4-204ENST00000472206 HOXB7P09629 217 aa11.16□□□□□ -0.62
CTLA4-204ENST00000472206 ZNF530Q6P9A1 599 aaPredicted RBP11.16□□□□□ -0.62
CTLA4-204ENST00000472206 FTSJ3Q8IY81 847 aaKnown RBP11.16□□□□□ -0.62
CTLA4-204ENST00000472206 ARHGAP45Q92619 1136 aa11.16□□□□□ -0.62
CTLA4-204ENST00000472206 NLRP2Q9NX02 1062 aa11.16□□□□□ -0.62
CTLA4-204ENST00000472206 LAS1LQ9Y4W2 734 aaKnown RBP11.16□□□□□ -0.62
CTLA4-204ENST00000472206 ADAMTS7Q9UKP4 1686 aa11.16□□□□□ -0.62
CTLA4-204ENST00000472206 WNK3Q9BYP7 1800 aa11.16□□□□□ -0.62
CTLA4-204ENST00000472206 FAM83GA6ND36 823 aa11.15□□□□□ -0.62
CTLA4-204ENST00000472206 NUTM2BA6NNL0 878 aaPredicted RBP11.15□□□□□ -0.62
CTLA4-204ENST00000472206 NUTM2EB1AL46 878 aaPredicted RBP11.15□□□□□ -0.62
CTLA4-204ENST00000472206 IRX6P78412 446 aaPredicted RBP11.15□□□□□ -0.62
CTLA4-204ENST00000472206 TWISTNBQ3B726 338 aaPredicted RBP11.15□□□□□ -0.62
CTLA4-204ENST00000472206 NUTM2AQ8IVF1 878 aaPredicted RBP11.15□□□□□ -0.62
CTLA4-204ENST00000472206 TSPYL4Q9UJ04 414 aa11.15□□□□□ -0.62
CTLA4-204ENST00000472206 TEFQ10587 303 aa11.14□□□□□ -0.63
CTLA4-204ENST00000472206 TAF7Q15545 349 aaPredicted RBP11.14□□□□□ -0.63
CTLA4-204ENST00000472206 CARD10Q9BWT7 1032 aa11.14□□□□□ -0.63
CTLA4-204ENST00000472206 MRC1P22897 1456 aa11.13□□□□□ -0.63
CTLA4-204ENST00000472206 SPATA31A6Q5VVP1 1343 aa11.13□□□□□ -0.63
CTLA4-204ENST00000472206 PCDH11XQ9BZA7 1347 aa11.13□□□□□ -0.63
CTLA4-204ENST00000472206 PCDH11YQ9BZA8 1340 aa11.13□□□□□ -0.63
CTLA4-204ENST00000472206 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.13□□□□□ -0.63
CTLA4-204ENST00000472206 BCAR3O75815 825 aa11.13□□□□□ -0.63
CTLA4-204ENST00000472206 ADAMTS2O95450 1211 aa11.13□□□□□ -0.63
CTLA4-204ENST00000472206 ATF7IPQ6VMQ6 1270 aa11.13□□□□□ -0.63
CTLA4-204ENST00000472206 MCM10Q7L590 875 aa11.13□□□□□ -0.63
CTLA4-204ENST00000472206 USHBP1Q8N6Y0 703 aa11.13□□□□□ -0.63
CTLA4-204ENST00000472206 API5Q9BZZ5 524 aaKnown RBP11.13□□□□□ -0.63
CTLA4-204ENST00000472206 PTPRCP08575 1304 aa11.12□□□□□ -0.63
CTLA4-204ENST00000472206 CACNA1FO60840 1977 aa11.12□□□□□ -0.63
CTLA4-204ENST00000472206 VAMP4O75379 141 aa11.12□□□□□ -0.63
CTLA4-204ENST00000472206 TOM1L2Q6ZVM7 507 aa11.12□□□□□ -0.63
CTLA4-204ENST00000472206 DZIP1LQ8IYY4 767 aaKnown RBP11.12□□□□□ -0.63
CTLA4-204ENST00000472206 IFNL2Q8IZJ0 200 aa11.12□□□□□ -0.63
CTLA4-204ENST00000472206 FRAT1Q92837 279 aaPredicted RBP11.12□□□□□ -0.63
CTLA4-204ENST00000472206 THUMPD2Q9BTF0 503 aaKnown RBP11.12□□□□□ -0.63
CTLA4-204ENST00000472206 CDCA7Q9BWT1 371 aaPredicted RBP11.12□□□□□ -0.63
CTLA4-204ENST00000472206 DDX19BQ9UMR2 479 aa11.12□□□□□ -0.63
CTLA4-204ENST00000472206 SLIT2O94813 1529 aa11.12□□□□□ -0.63
CTLA4-204ENST00000472206 KDM3BQ7LBC6 1761 aa11.11□□□□□ -0.63
CTLA4-204ENST00000472206 MEGF6O75095 1541 aa11.11□□□□□ -0.63
CTLA4-204ENST00000472206 PLIN1O60240 522 aa11.11□□□□□ -0.63
CTLA4-204ENST00000472206 EVA1CP58658 441 aa11.11□□□□□ -0.63
CTLA4-204ENST00000472206 DCTN1Q14203 1278 aa11.11□□□□□ -0.63
CTLA4-204ENST00000472206 EXOC6Q8TAG9 804 aa11.11□□□□□ -0.63
CTLA4-204ENST00000472206 SSH1Q8WYL5 1049 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms