RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 C11orf95C9JLR9 678 aaPredicted RBP8.63□□□□□ -1.03
ITGB1-209ENST00000472147 KHSRPQ92945 711 aaKnown RBP eCLIP8.63□□□□□ -1.034e-6■■□□□ 14.1
ITGB1-209ENST00000472147 POGKQ9P215 609 aa8.63□□□□□ -1.03
ITGB1-209ENST00000472147 APBA3O96018 575 aa8.62□□□□□ -1.03
ITGB1-209ENST00000472147 YY1P25490 414 aa8.62□□□□□ -1.03
ITGB1-209ENST00000472147 MLLT3P42568 568 aaPredicted RBP8.62□□□□□ -1.03
ITGB1-209ENST00000472147 EZH2Q15910 746 aaKnown RBP8.62□□□□□ -1.03
ITGB1-209ENST00000472147 PPARGC1BQ86YN6 1023 aaKnown RBP8.62□□□□□ -1.03
ITGB1-209ENST00000472147 PMFBP1Q8TBY8 1022 aa8.62□□□□□ -1.03
ITGB1-209ENST00000472147 PRAM1Q96QH2 718 aa8.62□□□□□ -1.03
ITGB1-209ENST00000472147 MPHOSPH9Q99550 1183 aa8.62□□□□□ -1.03
ITGB1-209ENST00000472147 NALCNQ8IZF0 1738 aa8.62□□□□□ -1.03
ITGB1-209ENST00000472147 GPRASP1Q5JY77 1395 aa8.61□□□□□ -1.03
ITGB1-209ENST00000472147 PLEKHH1Q9ULM0 1364 aa8.61□□□□□ -1.03
ITGB1-209ENST00000472147 TRIM37O94972 964 aa8.61□□□□□ -1.03
ITGB1-209ENST00000472147 STAC3Q96MF2 364 aa8.61□□□□□ -1.03
ITGB1-209ENST00000472147 TNS3Q68CZ2 1445 aa8.61□□□□□ -1.03
ITGB1-209ENST00000472147 YTHDC2Q9H6S0 1430 aaKnown RBP8.61□□□□□ -1.03
ITGB1-209ENST00000472147 GLI3P10071 1580 aa8.61□□□□□ -1.03
ITGB1-209ENST00000472147 CDC42BPGQ6DT37 1551 aa8.61□□□□□ -1.03
ITGB1-209ENST00000472147 PARD3Q8TEW0 1356 aa8.61□□□□□ -1.03
ITGB1-209ENST00000472147 EVA1CP58658 441 aa8.6□□□□□ -1.03
ITGB1-209ENST00000472147 PDE3BQ13370 1112 aa8.6□□□□□ -1.03
ITGB1-209ENST00000472147 CFAP70Q5T0N1 1121 aa8.6□□□□□ -1.03
ITGB1-209ENST00000472147 FAM182BQ5T319 152 aa8.6□□□□□ -1.03
ITGB1-209ENST00000472147 SPHKAPQ2M3C7 1700 aa8.6□□□□□ -1.03
ITGB1-209ENST00000472147 CLTCL1P53675 1640 aa8.59□□□□□ -1.03
ITGB1-209ENST00000472147 NUDT7P0C024 238 aa8.59□□□□□ -1.03
ITGB1-209ENST00000472147 BARGINQ6ZT62 677 aa8.59□□□□□ -1.03
ITGB1-209ENST00000472147 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.59□□□□□ -1.03
ITGB1-209ENST00000472147 NGDNQ8NEJ9 315 aaKnown RBP8.59□□□□□ -1.03
ITGB1-209ENST00000472147 SPON1Q9HCB6 807 aa8.59□□□□□ -1.03
ITGB1-209ENST00000472147 PRDM11Q9NQV5 511 aa8.59□□□□□ -1.03
ITGB1-209ENST00000472147 DISP2A7MBM2 1401 aa8.59□□□□□ -1.03
ITGB1-209ENST00000472147 RRBP1Q9P2E9 1410 aaKnown RBP8.59□□□□□ -1.03
ITGB1-209ENST00000472147 SPATA31A1Q5TZJ5 1347 aa8.58□□□□□ -1.04
ITGB1-209ENST00000472147 SPATA31E1Q6ZUB1 1445 aa8.58□□□□□ -1.04
ITGB1-209ENST00000472147 WASLO00401 505 aaPredicted RBP8.58□□□□□ -1.04
ITGB1-209ENST00000472147 KCNQ2O43526 872 aa8.58□□□□□ -1.04
ITGB1-209ENST00000472147 SAFB2Q14151 953 aaKnown RBP eCLIP8.58□□□□□ -1.04
ITGB1-209ENST00000472147 KIF1BO60333 1816 aa8.57□□□□□ -1.04
ITGB1-209ENST00000472147 PPP1R1BQ9UD71 204 aaPredicted RBP8.57□□□□□ -1.04
ITGB1-209ENST00000472147 THRAP3Q9Y2W1 955 aaKnown RBP8.57□□□□□ -1.04
ITGB1-209ENST00000472147 LRP5O75197 1615 aa8.57□□□□□ -1.04
ITGB1-209ENST00000472147 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.57□□□□□ -1.04
ITGB1-209ENST00000472147 NRXN1Q9ULB1 1477 aa8.57□□□□□ -1.04
ITGB1-209ENST00000472147 ANKARQ7Z5J8 1434 aa8.56□□□□□ -1.04
ITGB1-209ENST00000472147 UTRNP46939 3433 aa8.56□□□□□ -1.04
ITGB1-209ENST00000472147 PLSCR1O15162 318 aa8.56□□□□□ -1.04
ITGB1-209ENST00000472147 LSM11P83369 360 aaKnown RBP eCLIP8.56□□□□□ -1.04
ITGB1-209ENST00000472147 SMYD5Q6GMV2 418 aa8.56□□□□□ -1.04
ITGB1-209ENST00000472147 EIF3AQ14152 1382 aaKnown RBP8.56□□□□□ -1.04
ITGB1-209ENST00000472147 PIK3C2GO75747 1445 aa8.55□□□□□ -1.04
ITGB1-209ENST00000472147 GRXCR2A6NFK2 248 aa8.55□□□□□ -1.04
ITGB1-209ENST00000472147 OSBPP22059 807 aa8.55□□□□□ -1.04
ITGB1-209ENST00000472147 TCP11L2Q8N4U5 519 aa8.55□□□□□ -1.04
ITGB1-209ENST00000472147 DDX12PQ92771 950 aa8.55□□□□□ -1.04
ITGB1-209ENST00000472147 STRN4Q9NRL3 753 aa8.55□□□□□ -1.04
ITGB1-209ENST00000472147 TRAK1Q9UPV9 953 aa8.55□□□□□ -1.04
ITGB1-209ENST00000472147 MARF1Q9Y4F3 1742 aaKnown RBP8.54□□□□□ -1.04
ITGB1-209ENST00000472147 ZNF316A6NFI3 1004 aaPredicted RBP8.54□□□□□ -1.04
ITGB1-209ENST00000472147 ZC3H6P61129 1189 aaKnown RBP8.54□□□□□ -1.04
ITGB1-209ENST00000472147 NUDT16Q96DE0 195 aaKnown RBP8.54□□□□□ -1.04
ITGB1-209ENST00000472147 HIRIP3Q9BW71 556 aaPredicted RBP8.54□□□□□ -1.04
ITGB1-209ENST00000472147 HCSTQ9UBK5 93 aa8.54□□□□□ -1.04
ITGB1-209ENST00000472147 LHX6Q9UPM6 363 aa8.54□□□□□ -1.04
ITGB1-209ENST00000472147 USP32Q8NFA0 1604 aa8.54□□□□□ -1.04
ITGB1-209ENST00000472147 PHF14O94880 888 aa8.53□□□□□ -1.04
ITGB1-209ENST00000472147 PRIM1P49642 420 aaKnown RBP8.53□□□□□ -1.04
ITGB1-209ENST00000472147 FOSBP53539 338 aa8.53□□□□□ -1.04
ITGB1-209ENST00000472147 CHRNA2Q15822 529 aa8.53□□□□□ -1.04
ITGB1-209ENST00000472147 USP35Q9P2H5 1018 aa8.53□□□□□ -1.04
ITGB1-209ENST00000472147 PCDHGA10Q9Y5H3 936 aa8.53□□□□□ -1.04
ITGB1-209ENST00000472147 BRWD3Q6RI45 1802 aa8.52□□□□□ -1.04
ITGB1-209ENST00000472147 NWD2Q9ULI1 1742 aa8.52□□□□□ -1.05
ITGB1-209ENST00000472147 KIAA0232Q92628 1395 aa8.52□□□□□ -1.05
ITGB1-209ENST00000472147 PLEKHG3A1L390 1219 aa8.52□□□□□ -1.05
ITGB1-209ENST00000472147 ABTB2Q8N961 1025 aa8.52□□□□□ -1.05
ITGB1-209ENST00000472147 KIF1AQ12756 1690 aa8.52□□□□□ -1.05
ITGB1-209ENST00000472147 MINK1Q8N4C8 1332 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-209ENST00000472147 PRR36Q9H6K5 1346 aa8.52□□□□□ -1.05
ITGB1-209ENST00000472147 RBM26Q5T8P6 1007 aaKnown RBP8.51□□□□□ -1.05
ITGB1-209ENST00000472147 LARP1Q6PKG0 1096 aaKnown RBP8.51□□□□□ -1.05
ITGB1-209ENST00000472147 NLRP13Q86W25 1043 aa8.51□□□□□ -1.05
ITGB1-209ENST00000472147 EPAS1Q99814 870 aa8.51□□□□□ -1.05
ITGB1-209ENST00000472147 NINLQ9Y2I6 1382 aa8.5□□□□□ -1.05
ITGB1-209ENST00000472147 TULP1O00294 542 aaPredicted RBP8.5□□□□□ -1.05
ITGB1-209ENST00000472147 GCP02774 474 aa8.5□□□□□ -1.05
ITGB1-209ENST00000472147 CDK19Q9BWU1 502 aa8.5□□□□□ -1.05
ITGB1-209ENST00000472147 PPLO60437 1756 aa8.5□□□□□ -1.05
ITGB1-209ENST00000472147 TYW1BQ6NUM6 668 aa8.49□□□□□ -1.05
ITGB1-209ENST00000472147 DCAF11Q8TEB1 546 aa8.49□□□□□ -1.05
ITGB1-209ENST00000472147 CDCA7Q9BWT1 371 aaPredicted RBP8.49□□□□□ -1.05
ITGB1-209ENST00000472147 CEP350Q5VT06 3117 aa8.49□□□□□ -1.05
ITGB1-209ENST00000472147 FMN2Q9NZ56 1722 aa8.49□□□□□ -1.05
ITGB1-209ENST00000472147 DDB1Q16531 1140 aa8.48□□□□□ -1.05
ITGB1-209ENST00000472147 NUTM2GQ5VZR2 741 aa8.48□□□□□ -1.05
ITGB1-209ENST00000472147 ZNF454Q8N9F8 522 aa8.48□□□□□ -1.05
ITGB1-209ENST00000472147 ZNF784Q8NCA9 323 aaPredicted RBP8.48□□□□□ -1.05
ITGB1-209ENST00000472147 ACEP12821 1306 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms