RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 ATP5J2-PTCD1G3V325 749 aa7.22□□□□□ -1.25
COPS3-206ENST00000471414 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
COPS3-206ENST00000471414 GMPRP36959 345 aa7.22□□□□□ -1.25
COPS3-206ENST00000471414 RNF144AP50876 292 aaPredicted RBP7.22□□□□□ -1.25
COPS3-206ENST00000471414 VAC14Q08AM6 782 aa7.22□□□□□ -1.25
COPS3-206ENST00000471414 WASHC4Q2M389 1173 aa7.22□□□□□ -1.25
COPS3-206ENST00000471414 PCDHB11Q9Y5F2 797 aa7.22□□□□□ -1.25
COPS3-206ENST00000471414 SENP3-EIF4A1A0A087X0R7 540 aa7.21□□□□□ -1.26
COPS3-206ENST00000471414 GPC1P35052 558 aa7.21□□□□□ -1.26
COPS3-206ENST00000471414 ABL2P42684 1182 aa7.21□□□□□ -1.26
COPS3-206ENST00000471414 CDCA7Q9BWT1 371 aaPredicted RBP7.21□□□□□ -1.26
COPS3-206ENST00000471414 FIGNL2A6NMB9 653 aa7.2□□□□□ -1.26
COPS3-206ENST00000471414 CYP2U1Q7Z449 544 aa7.2□□□□□ -1.26
COPS3-206ENST00000471414 NANOS1Q8WY41 292 aaKnown RBP7.2□□□□□ -1.26
COPS3-206ENST00000471414 POM121Q96HA1 1249 aa7.2□□□□□ -1.26
COPS3-206ENST00000471414 POLMQ9NP87 494 aaPredicted RBP7.2□□□□□ -1.26
COPS3-206ENST00000471414 HRH3Q9Y5N1 445 aa7.2□□□□□ -1.26
COPS3-206ENST00000471414 A0A1W2PRU2 124 aa7.19□□□□□ -1.26
COPS3-206ENST00000471414 SOX11P35716 441 aa7.19□□□□□ -1.26
COPS3-206ENST00000471414 FLIIQ13045 1269 aa7.19□□□□□ -1.26
COPS3-206ENST00000471414 CLN3Q13286 438 aa7.19□□□□□ -1.26
COPS3-206ENST00000471414 TSGA10IPQ3SY00 556 aa7.19□□□□□ -1.26
COPS3-206ENST00000471414 CCDC155Q8N6L0 562 aa7.19□□□□□ -1.26
COPS3-206ENST00000471414 ALG2Q9H553 416 aa7.18□□□□□ -1.26
COPS3-206ENST00000471414 GNRH1P01148 92 aa7.17□□□□□ -1.26
COPS3-206ENST00000471414 INSM1Q01101 510 aaPredicted RBP7.17□□□□□ -1.26
COPS3-206ENST00000471414 GRIP2Q9C0E4 1043 aa7.17□□□□□ -1.26
COPS3-206ENST00000471414 LYSMD3Q7Z3D4 306 aa7.16□□□□□ -1.26
COPS3-206ENST00000471414 RNF135Q8IUD6 432 aa7.16□□□□□ -1.26
COPS3-206ENST00000471414 SPATA31C2B4DYI2 1134 aa7.15□□□□□ -1.26
COPS3-206ENST00000471414 IL2RAP01589 272 aa7.15□□□□□ -1.26
COPS3-206ENST00000471414 ITGA6P23229 1130 aa7.15□□□□□ -1.26
COPS3-206ENST00000471414 SLFNL1Q499Z3 407 aa7.15□□□□□ -1.26
COPS3-206ENST00000471414 GPR161Q8N6U8 529 aaKnown RBP7.15□□□□□ -1.26
COPS3-206ENST00000471414 ARHGEF10LQ9HCE6 1279 aa7.15□□□□□ -1.26
COPS3-206ENST00000471414 DOLKQ9UPQ8 538 aa7.15□□□□□ -1.26
COPS3-206ENST00000471414 KRT76Q01546 638 aa7.14□□□□□ -1.27
COPS3-206ENST00000471414 MAP7D1Q3KQU3 841 aa7.14□□□□□ -1.27
COPS3-206ENST00000471414 XAGE2Q96GT9 111 aa7.14□□□□□ -1.27
COPS3-206ENST00000471414 ESYT1Q9BSJ8 1104 aa7.14□□□□□ -1.27
COPS3-206ENST00000471414 STK17AQ9UEE5 414 aa7.14□□□□□ -1.27
COPS3-206ENST00000471414 MEN1O00255 615 aa7.13□□□□□ -1.27
COPS3-206ENST00000471414 MYCP01106 439 aaPredicted RBP7.13□□□□□ -1.27
COPS3-206ENST00000471414 USP4Q13107 963 aa7.13□□□□□ -1.27
COPS3-206ENST00000471414 SEMA3FQ13275 785 aa7.13□□□□□ -1.27
COPS3-206ENST00000471414 WDR44Q5JSH3 913 aa7.13□□□□□ -1.27
COPS3-206ENST00000471414 FNBP4Q8N3X1 1017 aaPredicted RBP7.13□□□□□ -1.27
COPS3-206ENST00000471414 PLPP7Q8NBV4 271 aa7.13□□□□□ -1.27
COPS3-206ENST00000471414 NFATC2IPQ8NCF5 419 aa7.13□□□□□ -1.27
COPS3-206ENST00000471414 ADAMTS19Q8TE59 1207 aa7.13□□□□□ -1.27
COPS3-206ENST00000471414 FHDC1Q9C0D6 1143 aaPredicted RBP7.13□□□□□ -1.27
COPS3-206ENST00000471414 CUEDC1Q9NWM3 386 aaPredicted RBP7.13□□□□□ -1.27
COPS3-206ENST00000471414 PIK3CDO00329 1044 aa7.12□□□□□ -1.27
COPS3-206ENST00000471414 UBTFP17480 764 aaKnown RBP7.12□□□□□ -1.27
COPS3-206ENST00000471414 PRICKLE2Q7Z3G6 844 aa7.12□□□□□ -1.27
COPS3-206ENST00000471414 CNKSR1Q969H4 720 aa7.12□□□□□ -1.27
COPS3-206ENST00000471414 POM121CA8CG34 1229 aa7.11□□□□□ -1.27
COPS3-206ENST00000471414 WASLO00401 505 aaPredicted RBP7.11□□□□□ -1.27
COPS3-206ENST00000471414 SCNN1DP51172 638 aa7.11□□□□□ -1.27
COPS3-206ENST00000471414 NBPF10Q6P3W6 841 aaKnown RBP7.11□□□□□ -1.27
COPS3-206ENST00000471414 NBPF15Q8N660 670 aa7.11□□□□□ -1.27
COPS3-206ENST00000471414 NLRP3Q96P20 1036 aa7.11□□□□□ -1.27
COPS3-206ENST00000471414 ETNK1Q9HBU6 452 aa7.11□□□□□ -1.27
COPS3-206ENST00000471414 RAB6BQ9NRW1 208 aa7.11□□□□□ -1.27
COPS3-206ENST00000471414 DYRK1BQ9Y463 629 aa7.11□□□□□ -1.27
COPS3-206ENST00000471414 CENPCQ03188 943 aa7.1□□□□□ -1.27
COPS3-206ENST00000471414 ZSCAN1Q8NBB4 408 aa7.1□□□□□ -1.27
COPS3-206ENST00000471414 SIRT1Q96EB6 747 aa7.1□□□□□ -1.27
COPS3-206ENST00000471414 RAD21O60216 631 aa7.09□□□□□ -1.27
COPS3-206ENST00000471414 STAU1O95793 577 aaKnown RBP7.09□□□□□ -1.27
COPS3-206ENST00000471414 RHOQP17081 205 aa7.09□□□□□ -1.27
COPS3-206ENST00000471414 POU4F2Q12837 409 aa7.09□□□□□ -1.27
COPS3-206ENST00000471414 OXLD1Q5BKU9 147 aa7.09□□□□□ -1.27
COPS3-206ENST00000471414 RNFT1Q5M7Z0 435 aa7.09□□□□□ -1.27
COPS3-206ENST00000471414 UCN2Q96RP3 112 aa7.09□□□□□ -1.27
COPS3-206ENST00000471414 ESF1Q9H501 851 aaKnown RBP7.09□□□□□ -1.27
COPS3-206ENST00000471414 LZTS3O60299 673 aaPredicted RBP7.08□□□□□ -1.28
COPS3-206ENST00000471414 ESCO1Q5FWF5 840 aa7.08□□□□□ -1.28
COPS3-206ENST00000471414 SLC27A3Q5K4L6 730 aa7.08□□□□□ -1.28
COPS3-206ENST00000471414 WWC1Q8IX03 1113 aa7.08□□□□□ -1.28
COPS3-206ENST00000471414 TRIM22Q8IYM9 498 aa7.08□□□□□ -1.28
COPS3-206ENST00000471414 ZNF295-AS1Q8N0V1 137 aa7.08□□□□□ -1.28
COPS3-206ENST00000471414 VWA5B2Q8N398 1253 aa7.08□□□□□ -1.28
COPS3-206ENST00000471414 GMCL1Q96IK5 515 aa7.08□□□□□ -1.28
COPS3-206ENST00000471414 PCDHGA11Q9Y5H2 935 aa7.08□□□□□ -1.28
COPS3-206ENST00000471414 INHAP05111 366 aa7.07□□□□□ -1.28
COPS3-206ENST00000471414 SV2AQ7L0J3 742 aa7.07□□□□□ -1.28
COPS3-206ENST00000471414 TAS1R3Q7RTX0 852 aa7.07□□□□□ -1.28
COPS3-206ENST00000471414 CLUAP1Q96AJ1 413 aa7.07□□□□□ -1.28
COPS3-206ENST00000471414 ZNF837Q96EG3 531 aaPredicted RBP7.07□□□□□ -1.28
COPS3-206ENST00000471414 COL25A1Q9BXS0 654 aaPredicted RBP7.07□□□□□ -1.28
COPS3-206ENST00000471414 TMEM229AB2RXF0 380 aa7.06□□□□□ -1.28
COPS3-206ENST00000471414 THBS1P07996 1170 aa7.06□□□□□ -1.28
COPS3-206ENST00000471414 SLURP2P0DP57 97 aa7.06□□□□□ -1.28
COPS3-206ENST00000471414 GDF10P55107 478 aa7.06□□□□□ -1.28
COPS3-206ENST00000471414 GAS6Q14393 721 aa7.06□□□□□ -1.28
COPS3-206ENST00000471414 DBN1Q16643 649 aa7.06□□□□□ -1.28
COPS3-206ENST00000471414 PROSER2Q86WR7 435 aaPredicted RBP7.06□□□□□ -1.28
COPS3-206ENST00000471414 SLC4A9Q96Q91 983 aa7.06□□□□□ -1.28
COPS3-206ENST00000471414 A6NJR5 290 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms