RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ANO2Q9NQ90 1003 aa10.76□□□□□ -0.69
SMC5-202ENST00000471372 ANKRD33BA6NCL7 494 aa10.75□□□□□ -0.69
SMC5-202ENST00000471372 ERFEQ4G0M1 354 aa10.75□□□□□ -0.69
SMC5-202ENST00000471372 PCDHGA11Q9Y5H2 935 aa10.75□□□□□ -0.69
SMC5-202ENST00000471372 NPAS4Q8IUM7 802 aa10.74□□□□□ -0.69
SMC5-202ENST00000471372 GIPC2Q8TF65 315 aa10.74□□□□□ -0.69
SMC5-202ENST00000471372 IRX2Q9BZI1 471 aaPredicted RBP10.74□□□□□ -0.69
SMC5-202ENST00000471372 H3BRB1 525 aa10.73□□□□□ -0.69
SMC5-202ENST00000471372 ADH1BP00325 375 aa10.73□□□□□ -0.69
SMC5-202ENST00000471372 PSME1Q06323 249 aa10.73□□□□□ -0.69
SMC5-202ENST00000471372 BAP1Q92560 729 aa10.73□□□□□ -0.69
SMC5-202ENST00000471372 FOXJ1Q92949 421 aa10.73□□□□□ -0.69
SMC5-202ENST00000471372 TUT1Q9H6E5 874 aaKnown RBP10.73□□□□□ -0.69
SMC5-202ENST00000471372 RBM19Q9Y4C8 960 aaKnown RBP10.73□□□□□ -0.69
SMC5-202ENST00000471372 LINC01559Q495D7 138 aa10.72□□□□□ -0.69
SMC5-202ENST00000471372 C4orf48Q5BLP8 95 aa10.72□□□□□ -0.69
SMC5-202ENST00000471372 EGFL7Q9UHF1 273 aa10.72□□□□□ -0.69
SMC5-202ENST00000471372 ZPR1O75312 459 aa10.71□□□□□ -0.69
SMC5-202ENST00000471372 AGERQ15109 404 aa10.71□□□□□ -0.69
SMC5-202ENST00000471372 ICMTO60725 284 aa10.7□□□□□ -0.7
SMC5-202ENST00000471372 RNF20Q5VTR2 975 aa10.7□□□□□ -0.7
SMC5-202ENST00000471372 BPHLQ86WA6 291 aaPredicted RBP10.7□□□□□ -0.7
SMC5-202ENST00000471372 MKNK1Q9BUB5 465 aa10.7□□□□□ -0.7
SMC5-202ENST00000471372 SEPT3Q9UH03 358 aa10.7□□□□□ -0.7
SMC5-202ENST00000471372 PCDHB11Q9Y5F2 797 aa10.7□□□□□ -0.7
SMC5-202ENST00000471372 KCNC4Q03721 635 aa10.69□□□□□ -0.7
SMC5-202ENST00000471372 CAPN12Q6ZSI9 719 aa10.69□□□□□ -0.7
SMC5-202ENST00000471372 GLYCTKQ8IVS8 523 aa10.69□□□□□ -0.7
SMC5-202ENST00000471372 SLC10A4Q96EP9 437 aa10.69□□□□□ -0.7
SMC5-202ENST00000471372 HINFPQ9BQA5 517 aa10.69□□□□□ -0.7
SMC5-202ENST00000471372 USP35Q9P2H5 1018 aa10.69□□□□□ -0.7
SMC5-202ENST00000471372 SHROOM4Q9ULL8 1493 aa10.68□□□□□ -0.7
SMC5-202ENST00000471372 GTF3C2Q8WUA4 911 aaPredicted RBP10.68□□□□□ -0.7
SMC5-202ENST00000471372 USP4Q13107 963 aa10.67□□□□□ -0.7
SMC5-202ENST00000471372 MTMR3Q13615 1198 aa10.67□□□□□ -0.7
SMC5-202ENST00000471372 ECM1Q16610 540 aa10.67□□□□□ -0.7
SMC5-202ENST00000471372 ZNF511Q8NB15 262 aa10.67□□□□□ -0.7
SMC5-202ENST00000471372 TSEN2Q8NCE0 465 aaKnown RBP10.67□□□□□ -0.7
SMC5-202ENST00000471372 MTRQ99707 1265 aa10.67□□□□□ -0.7
SMC5-202ENST00000471372 DNMT3AQ9Y6K1 912 aaPredicted RBP10.67□□□□□ -0.7
SMC5-202ENST00000471372 ESPNB1AK53 854 aa10.66□□□□□ -0.7
SMC5-202ENST00000471372 GAS2L2Q8NHY3 880 aa10.66□□□□□ -0.7
SMC5-202ENST00000471372 PURBQ96QR8 312 aaKnown RBP10.66□□□□□ -0.7
SMC5-202ENST00000471372 SLC6A16Q9GZN6 736 aa10.66□□□□□ -0.7
SMC5-202ENST00000471372 C21orf2O43822 256 aa10.65□□□□□ -0.7
SMC5-202ENST00000471372 MAPK1P28482 360 aa10.65□□□□□ -0.7
SMC5-202ENST00000471372 WEE1P30291 646 aa10.65□□□□□ -0.7
SMC5-202ENST00000471372 TAGLNQ01995 201 aaKnown RBP10.65□□□□□ -0.7
SMC5-202ENST00000471372 FKBP5Q13451 457 aaPredicted RBP10.65□□□□□ -0.7
SMC5-202ENST00000471372 NBPF20Q3BBV1 942 aa10.65□□□□□ -0.7
SMC5-202ENST00000471372 C1QTNF2Q9BXJ5 285 aa10.65□□□□□ -0.7
SMC5-202ENST00000471372 ZNF516Q92618 1163 aa10.64□□□□□ -0.71
SMC5-202ENST00000471372 RAB15P59190 212 aa10.63□□□□□ -0.71
SMC5-202ENST00000471372 ARHGAP4P98171 946 aa10.63□□□□□ -0.71
SMC5-202ENST00000471372 ZNF326Q5BKZ1 582 aaKnown RBP10.63□□□□□ -0.71
SMC5-202ENST00000471372 FBXO33Q7Z6M2 555 aa10.63□□□□□ -0.71
SMC5-202ENST00000471372 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMC5-202ENST00000471372 FKBP4Q02790 459 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMC5-202ENST00000471372 ASB16Q96NS5 453 aa10.62□□□□□ -0.71
SMC5-202ENST00000471372 DCTN4Q9UJW0 460 aa10.62□□□□□ -0.71
SMC5-202ENST00000471372 TCF3P15923 654 aa10.61□□□□□ -0.71
SMC5-202ENST00000471372 SEPT12Q8IYM1 358 aa10.61□□□□□ -0.71
SMC5-202ENST00000471372 FCF1Q9Y324 198 aaKnown RBP10.61□□□□□ -0.71
SMC5-202ENST00000471372 M0R2N6 131 aa10.6□□□□□ -0.71
SMC5-202ENST00000471372 SCTRP47872 440 aa10.6□□□□□ -0.71
SMC5-202ENST00000471372 SH3BP2P78314 561 aa10.6□□□□□ -0.71
SMC5-202ENST00000471372 NAA30Q147X3 362 aaPredicted RBP10.6□□□□□ -0.71
SMC5-202ENST00000471372 TRMT44Q8IYL2 757 aaKnown RBP10.6□□□□□ -0.71
SMC5-202ENST00000471372 S1PR4O95977 384 aa10.59□□□□□ -0.71
SMC5-202ENST00000471372 SF3B2Q13435 895 aaKnown RBP10.59□□□□□ -0.71
SMC5-202ENST00000471372 TJAP1Q5JTD0 557 aa10.59□□□□□ -0.71
SMC5-202ENST00000471372 ZNF358Q9NW07 568 aa10.59□□□□□ -0.71
SMC5-202ENST00000471372 PTCD1O75127 700 aaKnown RBP10.58□□□□□ -0.72
SMC5-202ENST00000471372 MYCP01106 439 aaPredicted RBP10.57□□□□□ -0.72
SMC5-202ENST00000471372 NKX2-3Q8TAU0 364 aa10.57□□□□□ -0.72
SMC5-202ENST00000471372 KCTD15Q96SI1 283 aaPredicted RBP10.57□□□□□ -0.72
SMC5-202ENST00000471372 IL21Q9HBE4 155 aa10.57□□□□□ -0.72
SMC5-202ENST00000471372 CDV3Q9UKY7 258 aaKnown RBP10.57□□□□□ -0.72
SMC5-202ENST00000471372 TMEM229AB2RXF0 380 aa10.56□□□□□ -0.72
SMC5-202ENST00000471372 STAU1O95793 577 aaKnown RBP10.56□□□□□ -0.72
SMC5-202ENST00000471372 VAMP1P23763 118 aa10.56□□□□□ -0.72
SMC5-202ENST00000471372 CCDC125Q86Z20 511 aa10.56□□□□□ -0.72
SMC5-202ENST00000471372 ZSCAN29Q8IWY8 852 aaPredicted RBP10.56□□□□□ -0.72
SMC5-202ENST00000471372 HELQQ8TDG4 1101 aa10.55□□□□□ -0.72
SMC5-202ENST00000471372 ERVH48-1M5A8F1 160 aa10.54□□□□□ -0.72
SMC5-202ENST00000471372 RECKO95980 971 aa10.54□□□□□ -0.72
SMC5-202ENST00000471372 IGFBP4P22692 258 aa10.54□□□□□ -0.72
SMC5-202ENST00000471372 INTS6LQ5JSJ4 861 aaKnown RBP10.54□□□□□ -0.72
SMC5-202ENST00000471372 TNS4Q8IZW8 715 aa10.54□□□□□ -0.72
SMC5-202ENST00000471372 COL26A1Q96A83 441 aa10.54□□□□□ -0.72
SMC5-202ENST00000471372 SCNN1DP51172 638 aa10.53□□□□□ -0.72
SMC5-202ENST00000471372 RGL4Q8IZJ4 473 aa10.53□□□□□ -0.72
SMC5-202ENST00000471372 SCG3Q8WXD2 468 aaKnown RBP10.53□□□□□ -0.72
SMC5-202ENST00000471372 FOXO3O43524 673 aa10.52□□□□□ -0.73
SMC5-202ENST00000471372 EAPPQ56P03 285 aaPredicted RBP10.52□□□□□ -0.73
SMC5-202ENST00000471372 Q6ZNB5 142 aa10.52□□□□□ -0.73
SMC5-202ENST00000471372 NPR3P17342 541 aa10.51□□□□□ -0.73
SMC5-202ENST00000471372 COL19A1Q14993 1142 aa10.51□□□□□ -0.73
SMC5-202ENST00000471372 PPEF1O14829 653 aaPredicted RBP10.5□□□□□ -0.73
SMC5-202ENST00000471372 MPSTP25325 297 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms