RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 ZBBXA8MT70 800 aa5□□□□□ -1.61
COMMD3-209ENST00000471350 TRAK2O60296 914 aa5□□□□□ -1.61
COMMD3-209ENST00000471350 ADAMTS2O95450 1211 aa5□□□□□ -1.61
COMMD3-209ENST00000471350 LYSMD3Q7Z3D4 306 aa5□□□□□ -1.61
COMMD3-209ENST00000471350 GDF11O95390 407 aa4.99□□□□□ -1.61
COMMD3-209ENST00000471350 ITGB2P05107 769 aa4.99□□□□□ -1.61
COMMD3-209ENST00000471350 RHOQP17081 205 aa4.99□□□□□ -1.61
COMMD3-209ENST00000471350 DBN1Q16643 649 aa4.99□□□□□ -1.61
COMMD3-209ENST00000471350 TMEM259Q4ZIN3 620 aa4.99□□□□□ -1.61
COMMD3-209ENST00000471350 TMEM151AQ8N4L1 468 aa4.99□□□□□ -1.61
COMMD3-209ENST00000471350 SVOPQ8N4V2 548 aa4.99□□□□□ -1.61
COMMD3-209ENST00000471350 GRIP2Q9C0E4 1043 aa4.99□□□□□ -1.61
COMMD3-209ENST00000471350 A0A1W2PRU2 124 aa4.98□□□□□ -1.61
COMMD3-209ENST00000471350 CELA2BP08218 269 aaPredicted RBP4.98□□□□□ -1.61
COMMD3-209ENST00000471350 GPC1P35052 558 aa4.98□□□□□ -1.61
COMMD3-209ENST00000471350 SRSF11Q05519 484 aaKnown RBP4.98□□□□□ -1.61
COMMD3-209ENST00000471350 PRICKLE2Q7Z3G6 844 aa4.98□□□□□ -1.61
COMMD3-209ENST00000471350 MTMR14Q8NCE2 650 aa4.98□□□□□ -1.61
COMMD3-209ENST00000471350 OSBPL3Q9H4L5 887 aa4.98□□□□□ -1.61
COMMD3-209ENST00000471350 HRH3Q9Y5N1 445 aa4.98□□□□□ -1.61
COMMD3-209ENST00000471350 ATP5J2-PTCD1G3V325 749 aa4.97□□□□□ -1.61
COMMD3-209ENST00000471350 SOCS7O14512 581 aa4.97□□□□□ -1.61
COMMD3-209ENST00000471350 SLC24A1O60721 1099 aa4.97□□□□□ -1.61
COMMD3-209ENST00000471350 TRIM22Q8IYM9 498 aa4.97□□□□□ -1.61
COMMD3-209ENST00000471350 GPR25O00155 361 aa4.96□□□□□ -1.62
COMMD3-209ENST00000471350 UBAP2LQ14157 1087 aaKnown RBP4.96□□□□□ -1.62
COMMD3-209ENST00000471350 CC2D2BQ6DHV5 1058 aa4.96□□□□□ -1.62
COMMD3-209ENST00000471350 PNMA1Q8ND90 353 aa4.96□□□□□ -1.62
COMMD3-209ENST00000471350 PCDHB9Q9Y5E1 797 aa4.96□□□□□ -1.62
COMMD3-209ENST00000471350 SPATA31C2B4DYI2 1134 aa4.95□□□□□ -1.62
COMMD3-209ENST00000471350 RNF225M0QZC1 329 aaPredicted RBP4.95□□□□□ -1.62
COMMD3-209ENST00000471350 IRS1P35568 1242 aa4.95□□□□□ -1.62
COMMD3-209ENST00000471350 BRPF1P55201 1214 aaPredicted RBP4.95□□□□□ -1.62
COMMD3-209ENST00000471350 POU4F2Q12837 409 aa4.95□□□□□ -1.62
COMMD3-209ENST00000471350 NR1H3Q13133 447 aa4.95□□□□□ -1.62
COMMD3-209ENST00000471350 CLN3Q13286 438 aa4.95□□□□□ -1.62
COMMD3-209ENST00000471350 NBPF10Q6P3W6 841 aaKnown RBP4.95□□□□□ -1.62
COMMD3-209ENST00000471350 NBPF15Q8N660 670 aa4.95□□□□□ -1.62
COMMD3-209ENST00000471350 IL27Q8NEV9 243 aa4.95□□□□□ -1.62
COMMD3-209ENST00000471350 ACDQ96AP0 544 aa4.95□□□□□ -1.62
COMMD3-209ENST00000471350 PCMTD1Q96MG8 357 aaPredicted RBP4.95□□□□□ -1.62
COMMD3-209ENST00000471350 DYRK1BQ9Y463 629 aa4.95□□□□□ -1.62
COMMD3-209ENST00000471350 DNMT3AQ9Y6K1 912 aaPredicted RBP4.95□□□□□ -1.62
COMMD3-209ENST00000471350 IGF1RP08069 1367 aa4.94□□□□□ -1.62
COMMD3-209ENST00000471350 IL2RAP01589 272 aa4.94□□□□□ -1.62
COMMD3-209ENST00000471350 GMCL1Q96IK5 515 aa4.94□□□□□ -1.62
COMMD3-209ENST00000471350 CCDC85AQ96PX6 553 aaPredicted RBP4.94□□□□□ -1.62
COMMD3-209ENST00000471350 SNRKQ9NRH2 765 aa4.94□□□□□ -1.62
COMMD3-209ENST00000471350 MBIPQ9NS73 344 aa4.94□□□□□ -1.62
COMMD3-209ENST00000471350 MEN1O00255 615 aa4.93□□□□□ -1.62
COMMD3-209ENST00000471350 WDR44Q5JSH3 913 aa4.93□□□□□ -1.62
COMMD3-209ENST00000471350 CCDC125Q86Z20 511 aa4.93□□□□□ -1.62
COMMD3-209ENST00000471350 BANK1Q8NDB2 785 aa4.93□□□□□ -1.62
COMMD3-209ENST00000471350 GTPBP3Q969Y2 492 aaKnown RBP4.93□□□□□ -1.62
COMMD3-209ENST00000471350 CDCA7Q9BWT1 371 aaPredicted RBP4.93□□□□□ -1.62
COMMD3-209ENST00000471350 FHDC1Q9C0D6 1143 aaPredicted RBP4.93□□□□□ -1.62
COMMD3-209ENST00000471350 ARHGEF10LQ9HCE6 1279 aa4.93□□□□□ -1.62
COMMD3-209ENST00000471350 TSGA10IPQ3SY00 556 aa4.92□□□□□ -1.62
COMMD3-209ENST00000471350 KANK3Q6NY19 840 aa4.92□□□□□ -1.62
COMMD3-209ENST00000471350 C1orf229Q6ZS94 237 aaPredicted RBP4.92□□□□□ -1.62
COMMD3-209ENST00000471350 PHTF2Q8N3S3 785 aa4.92□□□□□ -1.62
COMMD3-209ENST00000471350 PCDHB11Q9Y5F2 797 aa4.92□□□□□ -1.62
COMMD3-209ENST00000471350 CNTNAP5Q8WYK1 1306 aa4.92□□□□□ -1.62
COMMD3-209ENST00000471350 HOXB4P17483 251 aaPredicted RBP4.91□□□□□ -1.62
COMMD3-209ENST00000471350 NEUROD2Q15784 382 aa4.91□□□□□ -1.62
COMMD3-209ENST00000471350 CYP2U1Q7Z449 544 aa4.91□□□□□ -1.62
COMMD3-209ENST00000471350 SCARF2Q96GP6 870 aaPredicted RBP4.91□□□□□ -1.62
COMMD3-209ENST00000471350 RAB6BQ9NRW1 208 aa4.91□□□□□ -1.62
COMMD3-209ENST00000471350 CEP126Q9P2H0 1117 aa4.91□□□□□ -1.62
COMMD3-209ENST00000471350 CHIC2Q9UKJ5 165 aa4.91□□□□□ -1.62
COMMD3-209ENST00000471350 HCN2Q9UL51 889 aa4.91□□□□□ -1.62
COMMD3-209ENST00000471350 WASLO00401 505 aaPredicted RBP4.9□□□□□ -1.63
COMMD3-209ENST00000471350 STAU1O95793 577 aaKnown RBP4.9□□□□□ -1.63
COMMD3-209ENST00000471350 BCRP11274 1271 aa4.9□□□□□ -1.63
COMMD3-209ENST00000471350 MCCD1P59942 119 aaPredicted RBP4.9□□□□□ -1.63
COMMD3-209ENST00000471350 IRF5Q13568 498 aa4.9□□□□□ -1.63
COMMD3-209ENST00000471350 RNF20Q5VTR2 975 aa4.9□□□□□ -1.63
COMMD3-209ENST00000471350 GPAT2Q6NUI2 795 aa4.9□□□□□ -1.63
COMMD3-209ENST00000471350 RIPOR1Q6ZS17 1223 aa4.9□□□□□ -1.63
COMMD3-209ENST00000471350 TRIM52Q96A61 297 aa4.9□□□□□ -1.63
COMMD3-209ENST00000471350 XAGE2Q96GT9 111 aa4.9□□□□□ -1.63
COMMD3-209ENST00000471350 DCAF5Q96JK2 942 aa4.9□□□□□ -1.63
COMMD3-209ENST00000471350 ESYT1Q9BSJ8 1104 aa4.9□□□□□ -1.63
COMMD3-209ENST00000471350 LRRC4BQ9NT99 713 aa4.9□□□□□ -1.63
COMMD3-209ENST00000471350 F11P03951 625 aa4.89□□□□□ -1.63
COMMD3-209ENST00000471350 PROCP04070 461 aa4.89□□□□□ -1.63
COMMD3-209ENST00000471350 MARSP56192 900 aaKnown RBP4.89□□□□□ -1.63
COMMD3-209ENST00000471350 CENPCQ03188 943 aa4.89□□□□□ -1.63
COMMD3-209ENST00000471350 PLA2G4EQ3MJ16 856 aa4.89□□□□□ -1.63
COMMD3-209ENST00000471350 ZNF295-AS1Q8N0V1 137 aa4.89□□□□□ -1.63
COMMD3-209ENST00000471350 CNKSR1Q969H4 720 aa4.89□□□□□ -1.63
COMMD3-209ENST00000471350 GAS2L1Q99501 681 aaPredicted RBP4.89□□□□□ -1.63
COMMD3-209ENST00000471350 NDUFB9Q9Y6M9 179 aa4.89□□□□□ -1.63
COMMD3-209ENST00000471350 SHISA8B8ZZ34 492 aa4.88□□□□□ -1.63
COMMD3-209ENST00000471350 H7C1W4 665 aa4.88□□□□□ -1.63
COMMD3-209ENST00000471350 OIP5O43482 229 aa4.88□□□□□ -1.63
COMMD3-209ENST00000471350 GNRH1P01148 92 aa4.88□□□□□ -1.63
COMMD3-209ENST00000471350 IGHA1P01876 353 aa4.88□□□□□ -1.63
COMMD3-209ENST00000471350 SNRPNP63162 240 aaKnown RBP4.88□□□□□ -1.63
COMMD3-209ENST00000471350 C4orf17Q53FE4 359 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms