RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 BRPF3Q9ULD4 1205 aa8.06□□□□□ -1.12
BRCA1-210ENST00000471181 CCDC96Q2M329 555 aa8.05□□□□□ -1.12
BRCA1-210ENST00000471181 NLRP2Q9NX02 1062 aa8.05□□□□□ -1.12
BRCA1-210ENST00000471181 PDCP20941 246 aa8.05□□□□□ -1.12
BRCA1-210ENST00000471181 DZIP1Q86YF9 867 aaKnown RBP8.05□□□□□ -1.12
BRCA1-210ENST00000471181 UBXN4Q92575 508 aa8.05□□□□□ -1.12
BRCA1-210ENST00000471181 NACAP1Q9BZK3 213 aa8.05□□□□□ -1.12
BRCA1-210ENST00000471181 FILIP1Q7Z7B0 1213 aa8.05□□□□□ -1.12
BRCA1-210ENST00000471181 RPUSD2Q8IZ73 545 aaKnown RBP8.05□□□□□ -1.12
BRCA1-210ENST00000471181 RGS22Q8NE09 1264 aa8.05□□□□□ -1.12
BRCA1-210ENST00000471181 TNIP1Q15025 636 aa8.05□□□□□ -1.12
BRCA1-210ENST00000471181 FBF1Q8TES7 1133 aa8.05□□□□□ -1.12
BRCA1-210ENST00000471181 GBP3Q9H0R5 595 aa8.05□□□□□ -1.12
BRCA1-210ENST00000471181 SH3BP5O60239 455 aa8.05□□□□□ -1.12
BRCA1-210ENST00000471181 NUTM2GQ5VZR2 741 aa8.05□□□□□ -1.12
BRCA1-210ENST00000471181 PDCL2Q8N4E4 241 aa8.05□□□□□ -1.12
BRCA1-210ENST00000471181 NOL3O60936 208 aaKnown RBP8.04□□□□□ -1.12
BRCA1-210ENST00000471181 SURF6O75683 361 aaKnown RBP8.04□□□□□ -1.12
BRCA1-210ENST00000471181 HMOX1P09601 288 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 TMCO4Q5TGY1 634 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 UPF3BQ9BZI7 483 aaKnown RBP8.04□□□□□ -1.12
BRCA1-210ENST00000471181 SPINK5Q9NQ38 1064 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-210ENST00000471181 APAF1O14727 1248 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 CACNA2D4Q7Z3S7 1137 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 OTUD6BQ8N6M0 293 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 MPHOSPH9Q99550 1183 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 SETD5Q9C0A6 1442 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 TTC36A6NLP5 189 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 HIP1O00291 1037 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 VGFO15240 615 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-210ENST00000471181 MAP9Q49MG5 647 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 SPECC1Q5M775 1068 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 CFAP58Q5T655 872 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 FSD2A1L4K1 749 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 TSG101Q99816 390 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 NDC80O14777 642 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 IMMTQ16891 758 aaKnown RBP8.04□□□□□ -1.12
BRCA1-210ENST00000471181 MAATS1Q7Z4T9 603 aa8.04□□□□□ -1.12
BRCA1-210ENST00000471181 CCDC6Q16204 474 aa8.03□□□□□ -1.12
BRCA1-210ENST00000471181 CFAP100Q494V2 611 aa8.03□□□□□ -1.12
BRCA1-210ENST00000471181 FAM107BQ9H098 131 aa8.03□□□□□ -1.12
BRCA1-210ENST00000471181 SPECC1LQ69YQ0 1117 aa8.03□□□□□ -1.12
BRCA1-210ENST00000471181 SPATA32Q96LK8 384 aa8.03□□□□□ -1.12
BRCA1-210ENST00000471181 ANAPC4Q9UJX5 808 aa8.03□□□□□ -1.12
BRCA1-210ENST00000471181 CYP46A1Q9Y6A2 500 aa8.03□□□□□ -1.12
BRCA1-210ENST00000471181 SMTNL1A8MU46 457 aa8.03□□□□□ -1.12
BRCA1-210ENST00000471181 FKBP15Q5T1M5 1219 aa8.03□□□□□ -1.12
BRCA1-210ENST00000471181 PAIP2Q9BPZ3 127 aaKnown RBP8.03□□□□□ -1.12
BRCA1-210ENST00000471181 HLTFQ14527 1009 aaKnown RBP eCLIP8.03□□□□□ -1.123e-6■■□□□ 13.4
BRCA1-210ENST00000471181 SIL1Q9H173 461 aa8.03□□□□□ -1.12
BRCA1-210ENST00000471181 EVC2Q86UK5 1308 aa8.03□□□□□ -1.12
BRCA1-210ENST00000471181 PRPF4BQ13523 1007 aaKnown RBP8.02□□□□□ -1.12
BRCA1-210ENST00000471181 GTPBP4Q9BZE4 634 aaKnown RBP8.02□□□□□ -1.12
BRCA1-210ENST00000471181 ABCA5Q8WWZ7 1642 aa8.02□□□□□ -1.13
BRCA1-210ENST00000471181 EEA1Q15075 1411 aa8.02□□□□□ -1.13
BRCA1-210ENST00000471181 PUF60Q9UHX1 559 aaKnown RBP8.02□□□□□ -1.13
BRCA1-210ENST00000471181 CUX1P39880 1505 aa8.02□□□□□ -1.13
BRCA1-210ENST00000471181 KIF5CO60282 957 aa8.02□□□□□ -1.13
BRCA1-210ENST00000471181 TDO2P48775 406 aa8.02□□□□□ -1.13
BRCA1-210ENST00000471181 VPS36Q86VN1 386 aa8.02□□□□□ -1.13
BRCA1-210ENST00000471181 IKBKGQ9Y6K9 419 aa8.02□□□□□ -1.13
BRCA1-210ENST00000471181 GTF2F1P35269 517 aaKnown RBP eCLIP8.02□□□□□ -1.134e-8■■■□□ 16.5
BRCA1-210ENST00000471181 UBAC1Q9BSL1 405 aa8.02□□□□□ -1.13
BRCA1-210ENST00000471181 TAOK3Q9H2K8 898 aa8.02□□□□□ -1.13
BRCA1-210ENST00000471181 A0A1W2PRG0 241 aa8.02□□□□□ -1.13
BRCA1-210ENST00000471181 SLU7O95391 586 aaKnown RBP8.02□□□□□ -1.13
BRCA1-210ENST00000471181 KIF4BQ2VIQ3 1234 aa8.02□□□□□ -1.13
BRCA1-210ENST00000471181 SPTY2D1Q68D10 685 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-210ENST00000471181 SREK1Q8WXA9 508 aaKnown RBP8.02□□□□□ -1.13
BRCA1-210ENST00000471181 ZMYND15Q9H091 742 aa8.02□□□□□ -1.13
BRCA1-210ENST00000471181 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.02□□□□□ -1.13
BRCA1-210ENST00000471181 FAM184BQ9ULE4 1060 aa8.02□□□□□ -1.13
BRCA1-210ENST00000471181 V9GYY5 206 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-210ENST00000471181 TTLL12Q14166 644 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-210ENST00000471181 CTR9Q6PD62 1173 aa8.01□□□□□ -1.13
BRCA1-210ENST00000471181 PANK1Q8TE04 598 aa8.01□□□□□ -1.13
BRCA1-210ENST00000471181 CAMK4Q16566 473 aa8.01□□□□□ -1.13
BRCA1-210ENST00000471181 KLHL10Q6JEL2 608 aa8.01□□□□□ -1.13
BRCA1-210ENST00000471181 ARHGAP35Q9NRY4 1499 aa8.01□□□□□ -1.13
BRCA1-210ENST00000471181 MCM3P25205 808 aa8.01□□□□□ -1.13
BRCA1-210ENST00000471181 GNAI1P63096 354 aa8.01□□□□□ -1.13
BRCA1-210ENST00000471181 KRT85P78386 507 aa8.01□□□□□ -1.13
BRCA1-210ENST00000471181 LARP1BQ659C4 914 aaKnown RBP8.01□□□□□ -1.13
BRCA1-210ENST00000471181 CGNQ9P2M7 1197 aaKnown RBP8.01□□□□□ -1.13
BRCA1-210ENST00000471181 URI1O94763 535 aaPredicted RBP8.01□□□□□ -1.13
BRCA1-210ENST00000471181 TDRD12Q587J7 1177 aaKnown RBP8.01□□□□□ -1.13
BRCA1-210ENST00000471181 C1orf115Q9H7X2 142 aa8.01□□□□□ -1.13
BRCA1-210ENST00000471181 CDKL5O76039 1030 aa8.01□□□□□ -1.13
BRCA1-210ENST00000471181 FKBP4Q02790 459 aaKnown RBP eCLIP8.01□□□□□ -1.13
BRCA1-210ENST00000471181 TRMT1LQ7Z2T5 733 aaKnown RBP8.01□□□□□ -1.13
BRCA1-210ENST00000471181 NUP62CLQ9H1M0 184 aa8.01□□□□□ -1.13
BRCA1-210ENST00000471181 TERF1P54274 439 aa8□□□□□ -1.13
BRCA1-210ENST00000471181 FLIIQ13045 1269 aa8□□□□□ -1.13
BRCA1-210ENST00000471181 MAP7D1Q3KQU3 841 aa8□□□□□ -1.13
BRCA1-210ENST00000471181 ANKRD1Q15327 319 aa8□□□□□ -1.13
BRCA1-210ENST00000471181 SMARCC1Q92922 1105 aaPredicted RBP8□□□□□ -1.13
BRCA1-210ENST00000471181 FERMT1Q9BQL6 677 aa8□□□□□ -1.13
BRCA1-210ENST00000471181 CCDC63Q8NA47 563 aa8□□□□□ -1.13
BRCA1-210ENST00000471181 NUP88Q99567 741 aaPredicted RBP8□□□□□ -1.13
BRCA1-210ENST00000471181 SEC63Q9UGP8 760 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms