RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 TBC1D2Q9BYX2 928 aa9.28□□□□□ -0.92
CLIP4-209ENST00000471165 CDV3Q9UKY7 258 aaKnown RBP9.28□□□□□ -0.92
CLIP4-209ENST00000471165 MAP2K3P46734 347 aa9.27□□□□□ -0.93
CLIP4-209ENST00000471165 TSC1Q92574 1164 aa9.27□□□□□ -0.93
CLIP4-209ENST00000471165 GPKOWQ92917 476 aaPredicted RBP eCLIP9.27□□□□□ -0.93
CLIP4-209ENST00000471165 HOXB4P17483 251 aaPredicted RBP9.26□□□□□ -0.93
CLIP4-209ENST00000471165 RNF144AP50876 292 aaPredicted RBP9.26□□□□□ -0.93
CLIP4-209ENST00000471165 TMPRSS4Q9NRS4 437 aa9.26□□□□□ -0.93
CLIP4-209ENST00000471165 ARTNQ5T4W7 220 aa9.25□□□□□ -0.93
CLIP4-209ENST00000471165 ZFP64Q9NPA5 681 aa9.25□□□□□ -0.93
CLIP4-209ENST00000471165 ADD1P35611 737 aaKnown RBP9.24□□□□□ -0.93
CLIP4-209ENST00000471165 ZNF784Q8NCA9 323 aaPredicted RBP9.24□□□□□ -0.93
CLIP4-209ENST00000471165 EDARADDQ8WWZ3 215 aa9.24□□□□□ -0.93
CLIP4-209ENST00000471165 BEGAINQ9BUH8 593 aa9.24□□□□□ -0.93
CLIP4-209ENST00000471165 DYRK1BQ9Y463 629 aa9.24□□□□□ -0.93
CLIP4-209ENST00000471165 GAS2L1Q99501 681 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-209ENST00000471165 ARHGAP9Q9BRR9 750 aa9.23□□□□□ -0.93
CLIP4-209ENST00000471165 LILRA1O75019 489 aa9.22□□□□□ -0.93
CLIP4-209ENST00000471165 DIXDC1Q155Q3 683 aa9.22□□□□□ -0.93
CLIP4-209ENST00000471165 KLRG1Q96E93 195 aa9.22□□□□□ -0.93
CLIP4-209ENST00000471165 GNB5O14775 395 aa9.21□□□□□ -0.94
CLIP4-209ENST00000471165 KRTAP4-7Q9BYR0 210 aa9.21□□□□□ -0.94
CLIP4-209ENST00000471165 PIK3R2O00459 728 aa9.2□□□□□ -0.94
CLIP4-209ENST00000471165 CSPP1Q1MSJ5 1256 aa9.2□□□□□ -0.94
CLIP4-209ENST00000471165 NBPF11Q86T75 865 aa9.2□□□□□ -0.94
CLIP4-209ENST00000471165 GDF2Q9UK05 429 aaPredicted RBP9.2□□□□□ -0.94
CLIP4-209ENST00000471165 TTLL12Q14166 644 aaPredicted RBP9.19□□□□□ -0.94
CLIP4-209ENST00000471165 PDXDC2PQ6P474 469 aa9.19□□□□□ -0.94
CLIP4-209ENST00000471165 RIC3Q7Z5B4 369 aa9.19□□□□□ -0.94
CLIP4-209ENST00000471165 AMPD1P23109 780 aa9.18□□□□□ -0.94
CLIP4-209ENST00000471165 RSPO4Q2I0M5 234 aaPredicted RBP9.18□□□□□ -0.94
CLIP4-209ENST00000471165 NUCKS1Q9H1E3 243 aaKnown RBP9.18□□□□□ -0.94
CLIP4-209ENST00000471165 ZBTB33Q86T24 672 aa9.17□□□□□ -0.94
CLIP4-209ENST00000471165 GATA4P43694 442 aa9.16□□□□□ -0.94
CLIP4-209ENST00000471165 GIGYF2Q6Y7W6 1299 aaKnown RBP9.16□□□□□ -0.94
CLIP4-209ENST00000471165 CFHR5Q9BXR6 569 aa9.16□□□□□ -0.94
CLIP4-209ENST00000471165 RAB15P59190 212 aa9.15□□□□□ -0.94
CLIP4-209ENST00000471165 POU4F2Q12837 409 aa9.15□□□□□ -0.94
CLIP4-209ENST00000471165 GOLGA6L1Q8N7Z2 621 aa9.15□□□□□ -0.94
CLIP4-209ENST00000471165 NOP53Q9NZM5 478 aaKnown RBP9.15□□□□□ -0.94
CLIP4-209ENST00000471165 NUTM2BA6NNL0 878 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-209ENST00000471165 NUTM2EB1AL46 878 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-209ENST00000471165 ERVH48-1M5A8F1 160 aa9.14□□□□□ -0.95
CLIP4-209ENST00000471165 GPC1P35052 558 aa9.14□□□□□ -0.95
CLIP4-209ENST00000471165 QPCTQ16769 361 aa9.14□□□□□ -0.95
CLIP4-209ENST00000471165 NUTM2DQ5VT03 806 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-209ENST00000471165 NUTM2AQ8IVF1 878 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-209ENST00000471165 NKAPLQ5M9Q1 402 aa9.13□□□□□ -0.95
CLIP4-209ENST00000471165 LCE1DQ5T752 114 aa9.12□□□□□ -0.95
CLIP4-209ENST00000471165 HELBQ8NG08 1087 aaPredicted RBP9.12□□□□□ -0.95
CLIP4-209ENST00000471165 THBS1P07996 1170 aa9.11□□□□□ -0.95
CLIP4-209ENST00000471165 DGKGP49619 791 aa9.11□□□□□ -0.95
CLIP4-209ENST00000471165 NBPF20Q3BBV1 942 aa9.11□□□□□ -0.95
CLIP4-209ENST00000471165 BTBD6Q96KE9 485 aa9.11□□□□□ -0.95
CLIP4-209ENST00000471165 OCSTAMPQ9BR26 566 aa9.11□□□□□ -0.95
CLIP4-209ENST00000471165 KDM2AQ9Y2K7 1162 aa9.11□□□□□ -0.95
CLIP4-209ENST00000471165 MEN1O00255 615 aa9.1□□□□□ -0.95
CLIP4-209ENST00000471165 F11P03951 625 aa9.1□□□□□ -0.95
CLIP4-209ENST00000471165 NBPF10Q6P3W6 841 aaKnown RBP9.1□□□□□ -0.95
CLIP4-209ENST00000471165 SLCO4C1Q6ZQN7 724 aa9.1□□□□□ -0.95
CLIP4-209ENST00000471165 NBPF15Q8N660 670 aa9.1□□□□□ -0.95
CLIP4-209ENST00000471165 LILRB3O75022 631 aa9.09□□□□□ -0.95
CLIP4-209ENST00000471165 AMHR2Q16671 573 aa9.09□□□□□ -0.95
CLIP4-209ENST00000471165 FKBPLQ9UIM3 349 aa9.09□□□□□ -0.95
CLIP4-209ENST00000471165 DYRK3O43781 588 aa9.08□□□□□ -0.96
CLIP4-209ENST00000471165 CYLDQ9NQC7 956 aa9.08□□□□□ -0.96
CLIP4-209ENST00000471165 LIMD1Q9UGP4 676 aa9.08□□□□□ -0.96
CLIP4-209ENST00000471165 GGA1Q9UJY5 639 aa9.08□□□□□ -0.96
CLIP4-209ENST00000471165 PHF24Q9UPV7 400 aa9.08□□□□□ -0.96
CLIP4-209ENST00000471165 ATP5J2-PTCD1G3V325 749 aa9.07□□□□□ -0.96
CLIP4-209ENST00000471165 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
CLIP4-209ENST00000471165 ADAM32Q8TC27 787 aa9.07□□□□□ -0.96
CLIP4-209ENST00000471165 TIMMDC1Q9NPL8 285 aa9.07□□□□□ -0.96
CLIP4-209ENST00000471165 TULP1O00294 542 aaPredicted RBP9.06□□□□□ -0.96
CLIP4-209ENST00000471165 EPXP11678 715 aa9.06□□□□□ -0.96
CLIP4-209ENST00000471165 RTL5Q5HYW3 569 aaPredicted RBP9.06□□□□□ -0.96
CLIP4-209ENST00000471165 TPSG1Q9NRR2 321 aa9.06□□□□□ -0.96
CLIP4-209ENST00000471165 A0A1W2PRU2 124 aa9.05□□□□□ -0.96
CLIP4-209ENST00000471165 C2CD2LO14523 706 aa9.05□□□□□ -0.96
CLIP4-209ENST00000471165 WDR44Q5JSH3 913 aa9.05□□□□□ -0.96
CLIP4-209ENST00000471165 GRIP2Q9C0E4 1043 aa9.05□□□□□ -0.96
CLIP4-209ENST00000471165 SPATA31C2B4DYI2 1134 aa9.04□□□□□ -0.96
CLIP4-209ENST00000471165 BMP4P12644 408 aa9.04□□□□□ -0.96
CLIP4-209ENST00000471165 PTK2Q05397 1052 aa9.04□□□□□ -0.96
CLIP4-209ENST00000471165 TUSC1Q2TAM9 212 aa9.04□□□□□ -0.96
CLIP4-209ENST00000471165 PRSS36Q5K4E3 855 aa9.04□□□□□ -0.96
CLIP4-209ENST00000471165 ZC3H4Q9UPT8 1303 aaKnown RBP9.04□□□□□ -0.96
CLIP4-209ENST00000471165 ESPNB1AK53 854 aa9.03□□□□□ -0.96
CLIP4-209ENST00000471165 COBLO75128 1261 aa9.03□□□□□ -0.96
CLIP4-209ENST00000471165 LRP8Q14114 963 aa9.03□□□□□ -0.96
CLIP4-209ENST00000471165 UBAP2LQ14157 1087 aaKnown RBP9.02□□□□□ -0.97
CLIP4-209ENST00000471165 NLRP3Q96P20 1036 aa9.01□□□□□ -0.97
CLIP4-209ENST00000471165 GPAMQ9HCL2 828 aa9.01□□□□□ -0.97
CLIP4-209ENST00000471165 GPSM3Q9Y4H4 160 aa9.01□□□□□ -0.97
CLIP4-209ENST00000471165 WASLO00401 505 aaPredicted RBP9□□□□□ -0.97
CLIP4-209ENST00000471165 SPATA31C1P0DKV0 1188 aa9□□□□□ -0.97
CLIP4-209ENST00000471165 CTDSPL2Q05D32 466 aa9□□□□□ -0.97
CLIP4-209ENST00000471165 TAS1R3Q7RTX0 852 aa9□□□□□ -0.97
CLIP4-209ENST00000471165 RNF135Q8IUD6 432 aa9□□□□□ -0.97
CLIP4-209ENST00000471165 HYAL3O43820 417 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms