RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 NR5A1Q13285 461 aa11.12□□□□□ -0.63
PTP4A1-202ENST00000470661 AAASQ9NRG9 546 aa11.12□□□□□ -0.63
PTP4A1-202ENST00000470661 DISP1Q96F81 1524 aa11.12□□□□□ -0.63
PTP4A1-202ENST00000470661 IQGAP2Q13576 1575 aa11.11□□□□□ -0.63
PTP4A1-202ENST00000470661 ADCY10Q96PN6 1610 aa11.11□□□□□ -0.63
PTP4A1-202ENST00000470661 RAB15P59190 212 aa11.11□□□□□ -0.63
PTP4A1-202ENST00000470661 AXIN1O15169 862 aa11.1□□□□□ -0.63
PTP4A1-202ENST00000470661 RAD21O60216 631 aa11.1□□□□□ -0.63
PTP4A1-202ENST00000470661 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
PTP4A1-202ENST00000470661 CDV3Q9UKY7 258 aaKnown RBP11.1□□□□□ -0.63
PTP4A1-202ENST00000470661 TNIKQ9UKE5 1360 aa11.1□□□□□ -0.63
PTP4A1-202ENST00000470661 PRXQ9BXM0 1461 aa11.1□□□□□ -0.63
PTP4A1-202ENST00000470661 WDR4P57081 412 aaKnown RBP11.09□□□□□ -0.63
PTP4A1-202ENST00000470661 CTC1Q2NKJ3 1217 aa11.09□□□□□ -0.63
PTP4A1-202ENST00000470661 NBPF20Q3BBV1 942 aa11.09□□□□□ -0.63
PTP4A1-202ENST00000470661 INTS6LQ5JSJ4 861 aaKnown RBP11.09□□□□□ -0.63
PTP4A1-202ENST00000470661 CRIPAKQ8N1N5 446 aa11.09□□□□□ -0.63
PTP4A1-202ENST00000470661 DACH1Q9UI36 760 aa11.09□□□□□ -0.63
PTP4A1-202ENST00000470661 CARMIL2Q6F5E8 1435 aa11.09□□□□□ -0.63
PTP4A1-202ENST00000470661 ZFAND3Q9H8U3 227 aa11.08□□□□□ -0.64
PTP4A1-202ENST00000470661 CAPN5O15484 640 aaPredicted RBP11.07□□□□□ -0.64
PTP4A1-202ENST00000470661 TIMP2P16035 220 aa11.07□□□□□ -0.64
PTP4A1-202ENST00000470661 SMCPP49901 116 aaPredicted RBP11.07□□□□□ -0.64
PTP4A1-202ENST00000470661 CCDC116Q8IYX3 515 aa11.07□□□□□ -0.64
PTP4A1-202ENST00000470661 ITPKCQ96DU7 683 aa11.07□□□□□ -0.64
PTP4A1-202ENST00000470661 KLF16Q9BXK1 252 aaPredicted RBP11.07□□□□□ -0.64
PTP4A1-202ENST00000470661 ZNF330Q9Y3S2 320 aaPredicted RBP11.07□□□□□ -0.64
PTP4A1-202ENST00000470661 GIGYF1O75420 1035 aaPredicted RBP11.06□□□□□ -0.64
PTP4A1-202ENST00000470661 ZIC2O95409 532 aaPredicted RBP11.06□□□□□ -0.64
PTP4A1-202ENST00000470661 PPP1R26Q5T8A7 1209 aaPredicted RBP11.05□□□□□ -0.64
PTP4A1-202ENST00000470661 GTF3C3Q9Y5Q9 886 aa11.05□□□□□ -0.64
PTP4A1-202ENST00000470661 UGGT2Q9NYU1 1516 aa11.04□□□□□ -0.64
PTP4A1-202ENST00000470661 ESPNB1AK53 854 aa11.04□□□□□ -0.64
PTP4A1-202ENST00000470661 BMP1P13497 986 aa11.04□□□□□ -0.64
PTP4A1-202ENST00000470661 EIF4G2P78344 907 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTP4A1-202ENST00000470661 WASHC4Q2M389 1173 aa11.04□□□□□ -0.64
PTP4A1-202ENST00000470661 UACAQ9BZF9 1416 aa11.03□□□□□ -0.64
PTP4A1-202ENST00000470661 KIF13AQ9H1H9 1805 aa11.03□□□□□ -0.64
PTP4A1-202ENST00000470661 TMPRSS4Q9NRS4 437 aa11.03□□□□□ -0.64
PTP4A1-202ENST00000470661 PLB1Q6P1J6 1458 aa11.03□□□□□ -0.64
PTP4A1-202ENST00000470661 ERVH48-1M5A8F1 160 aa11.02□□□□□ -0.65
PTP4A1-202ENST00000470661 WWC1Q8IX03 1113 aa11.02□□□□□ -0.65
PTP4A1-202ENST00000470661 EMILIN1Q9Y6C2 1016 aa11.02□□□□□ -0.65
PTP4A1-202ENST00000470661 KIAA0556O60303 1618 aa11.02□□□□□ -0.65
PTP4A1-202ENST00000470661 ABCC10Q5T3U5 1492 aa11.01□□□□□ -0.65
PTP4A1-202ENST00000470661 POM121CA8CG34 1229 aa11.01□□□□□ -0.65
PTP4A1-202ENST00000470661 DHX9Q08211 1270 aaKnown RBP11.01□□□□□ -0.65
PTP4A1-202ENST00000470661 ATP13A2Q9NQ11 1180 aa11.01□□□□□ -0.65
PTP4A1-202ENST00000470661 TSPOAP1O95153 1857 aa11.01□□□□□ -0.65
PTP4A1-202ENST00000470661 ASXL2Q76L83 1435 aa11.01□□□□□ -0.65
PTP4A1-202ENST00000470661 MCCD1P59942 119 aaPredicted RBP11□□□□□ -0.65
PTP4A1-202ENST00000470661 PROSER2Q86WR7 435 aaPredicted RBP11□□□□□ -0.65
PTP4A1-202ENST00000470661 PGPEP1Q9NXJ5 209 aa11□□□□□ -0.65
PTP4A1-202ENST00000470661 CEP126Q9P2H0 1117 aa11□□□□□ -0.65
PTP4A1-202ENST00000470661 CTTNBP2Q8WZ74 1663 aa11□□□□□ -0.65
PTP4A1-202ENST00000470661 ABCC2Q92887 1545 aa10.99□□□□□ -0.65
PTP4A1-202ENST00000470661 POTECB2RU33 542 aa10.99□□□□□ -0.65
PTP4A1-202ENST00000470661 CBLBQ13191 982 aa10.99□□□□□ -0.65
PTP4A1-202ENST00000470661 TRIM46Q7Z4K8 759 aa10.99□□□□□ -0.65
PTP4A1-202ENST00000470661 ZNF784Q8NCA9 323 aaPredicted RBP10.99□□□□□ -0.65
PTP4A1-202ENST00000470661 ZNF592Q92610 1267 aa10.99□□□□□ -0.65
PTP4A1-202ENST00000470661 SEMA3FQ13275 785 aa10.98□□□□□ -0.65
PTP4A1-202ENST00000470661 SEPT12Q8IYM1 358 aa10.98□□□□□ -0.65
PTP4A1-202ENST00000470661 GMPR2Q9P2T1 348 aaKnown RBP10.98□□□□□ -0.65
PTP4A1-202ENST00000470661 MAPKBP1O60336 1514 aa10.98□□□□□ -0.65
PTP4A1-202ENST00000470661 FNBP4Q8N3X1 1017 aaPredicted RBP10.97□□□□□ -0.65
PTP4A1-202ENST00000470661 DIP2BQ9P265 1576 aa10.97□□□□□ -0.65
PTP4A1-202ENST00000470661 UHRF1BP1LA0JNW5 1464 aa10.96□□□□□ -0.65
PTP4A1-202ENST00000470661 RNF20Q5VTR2 975 aa10.96□□□□□ -0.65
PTP4A1-202ENST00000470661 CYLDQ9NQC7 956 aa10.96□□□□□ -0.65
PTP4A1-202ENST00000470661 PCDHB11Q9Y5F2 797 aa10.96□□□□□ -0.65
PTP4A1-202ENST00000470661 FHOD3Q2V2M9 1422 aa10.95□□□□□ -0.66
PTP4A1-202ENST00000470661 MRPL14Q6P1L8 145 aaKnown RBP10.95□□□□□ -0.66
PTP4A1-202ENST00000470661 MEIOBQ8N635 442 aa10.95□□□□□ -0.66
PTP4A1-202ENST00000470661 GOLGA3Q08378 1498 aa10.94□□□□□ -0.66
PTP4A1-202ENST00000470661 EEA1Q15075 1411 aa10.94□□□□□ -0.66
PTP4A1-202ENST00000470661 A6NJR5 290 aa10.94□□□□□ -0.66
PTP4A1-202ENST00000470661 LILRA1O75019 489 aa10.94□□□□□ -0.66
PTP4A1-202ENST00000470661 SOX11P35716 441 aa10.94□□□□□ -0.66
PTP4A1-202ENST00000470661 ADAMTS19Q8TE59 1207 aa10.94□□□□□ -0.66
PTP4A1-202ENST00000470661 CCDC85AQ96PX6 553 aaPredicted RBP10.94□□□□□ -0.66
PTP4A1-202ENST00000470661 PURBQ96QR8 312 aaKnown RBP10.94□□□□□ -0.66
PTP4A1-202ENST00000470661 ALG2Q9H553 416 aa10.94□□□□□ -0.66
PTP4A1-202ENST00000470661 ZCCHC11Q5TAX3 1644 aaKnown RBP10.94□□□□□ -0.66
PTP4A1-202ENST00000470661 KDM5BQ9UGL1 1544 aa10.94□□□□□ -0.66
PTP4A1-202ENST00000470661 TSGA10IPQ3SY00 556 aa10.93□□□□□ -0.66
PTP4A1-202ENST00000470661 SLFNL1Q499Z3 407 aa10.93□□□□□ -0.66
PTP4A1-202ENST00000470661 C6orf118Q5T5N4 469 aa10.93□□□□□ -0.66
PTP4A1-202ENST00000470661 RNF135Q8IUD6 432 aa10.93□□□□□ -0.66
PTP4A1-202ENST00000470661 AGBL1Q96MI9 1066 aa10.93□□□□□ -0.66
PTP4A1-202ENST00000470661 ABCA8O94911 1581 aa10.92□□□□□ -0.66
PTP4A1-202ENST00000470661 PIK3CDO00329 1044 aa10.92□□□□□ -0.66
PTP4A1-202ENST00000470661 ADD1P35611 737 aaKnown RBP10.92□□□□□ -0.66
PTP4A1-202ENST00000470661 ZNF787Q6DD87 383 aa10.92□□□□□ -0.66
PTP4A1-202ENST00000470661 Q6ZVU0 165 aa10.92□□□□□ -0.66
PTP4A1-202ENST00000470661 PHTF2Q8N3S3 785 aa10.92□□□□□ -0.66
PTP4A1-202ENST00000470661 CDCA7Q9BWT1 371 aaPredicted RBP10.92□□□□□ -0.66
PTP4A1-202ENST00000470661 EPRSP07814 1512 aaKnown RBP10.91□□□□□ -0.66
PTP4A1-202ENST00000470661 SCTRP47872 440 aa10.91□□□□□ -0.66
PTP4A1-202ENST00000470661 LINC00528Q8N1L1 170 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms