RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 ONECUT3O60422 494 aaPredicted RBP27.52■■■□□ 2
BRAF-202ENST00000469930 QTRT2Q9H974 415 aaKnown RBP27.52■■■□□ 2
BRAF-202ENST00000469930 MEGF6O75095 1541 aa27.51■■■□□ 2
BRAF-202ENST00000469930 WNK3Q9BYP7 1800 aa27.51■■□□□ 1.99
BRAF-202ENST00000469930 MAPK8IP3Q9UPT6 1336 aa27.51■■□□□ 1.99
BRAF-202ENST00000469930 PLEKHO1Q53GL0 409 aaPredicted RBP27.51■■□□□ 1.99
BRAF-202ENST00000469930 PHACTR3Q96KR7 559 aa27.51■■□□□ 1.99
BRAF-202ENST00000469930 CCDC146Q8IYE0 955 aa27.5■■□□□ 1.99
BRAF-202ENST00000469930 GLI3P10071 1580 aa27.49■■□□□ 1.99
BRAF-202ENST00000469930 CCDC9Q9Y3X0 531 aaKnown RBP27.49■■□□□ 1.99
BRAF-202ENST00000469930 PKD1L3Q7Z443 1732 aa27.49■■□□□ 1.99
BRAF-202ENST00000469930 GAS2L2Q8NHY3 880 aa27.48■■□□□ 1.99
BRAF-202ENST00000469930 USP35Q9P2H5 1018 aa27.48■■□□□ 1.99
BRAF-202ENST00000469930 NFE2L2Q16236 605 aa27.47■■□□□ 1.99
BRAF-202ENST00000469930 SPG7Q9UQ90 795 aa27.47■■□□□ 1.99
BRAF-202ENST00000469930 APAF1O14727 1248 aa27.46■■□□□ 1.99
BRAF-202ENST00000469930 TMPOP42166 694 aaKnown RBP27.46■■□□□ 1.99
BRAF-202ENST00000469930 MTHFSDQ2M296 383 aaKnown RBP27.46■■□□□ 1.99
BRAF-202ENST00000469930 RGS17Q9UGC6 210 aaPredicted RBP27.46■■□□□ 1.99
BRAF-202ENST00000469930 ZCRB1Q8TBF4 217 aaKnown RBP27.45■■□□□ 1.98
BRAF-202ENST00000469930 THSD7AQ9UPZ6 1657 aa27.44■■□□□ 1.98
BRAF-202ENST00000469930 RBM6P78332 1123 aaKnown RBP27.44■■□□□ 1.98
BRAF-202ENST00000469930 CCDC27Q2M243 656 aa27.44■■□□□ 1.98
BRAF-202ENST00000469930 HTATSF1O43719 755 aaKnown RBP27.43■■□□□ 1.98
BRAF-202ENST00000469930 PHF23Q9BUL5 403 aaPredicted RBP27.43■■□□□ 1.98
BRAF-202ENST00000469930 EXOC5O00471 708 aa27.41■■□□□ 1.98
BRAF-202ENST00000469930 TNS2Q63HR2 1409 aa27.41■■□□□ 1.98
BRAF-202ENST00000469930 FAM98CQ17RN3 349 aaKnown RBP27.4■■□□□ 1.98
BRAF-202ENST00000469930 AKAP4Q5JQC9 854 aa27.4■■□□□ 1.98
BRAF-202ENST00000469930 PCDH11XQ9BZA7 1347 aa27.4■■□□□ 1.98
BRAF-202ENST00000469930 PCDH11YQ9BZA8 1340 aa27.4■■□□□ 1.98
BRAF-202ENST00000469930 RIPK4P57078 832 aa27.38■■□□□ 1.97
BRAF-202ENST00000469930 LMOD3Q0VAK6 560 aa27.38■■□□□ 1.97
BRAF-202ENST00000469930 DDB1Q16531 1140 aa27.38■■□□□ 1.97
BRAF-202ENST00000469930 ZNF530Q6P9A1 599 aaPredicted RBP27.38■■□□□ 1.97
BRAF-202ENST00000469930 IFNL2Q8IZJ0 200 aa27.38■■□□□ 1.97
BRAF-202ENST00000469930 SHANK3Q9BYB0 1731 aa27.38■■□□□ 1.97
BRAF-202ENST00000469930 PHKG2P15735 406 aa27.37■■□□□ 1.97
BRAF-202ENST00000469930 NKX1-1Q15270 411 aaPredicted RBP27.37■■□□□ 1.97
BRAF-202ENST00000469930 LRRC37A3O60309 1634 aa27.37■■□□□ 1.97
BRAF-202ENST00000469930 GNAT3A8MTJ3 354 aa27.36■■□□□ 1.97
BRAF-202ENST00000469930 CYP27B1O15528 508 aa27.36■■□□□ 1.97
BRAF-202ENST00000469930 HSP90AB1P08238 724 aaKnown RBP27.36■■□□□ 1.97
BRAF-202ENST00000469930 MAP3K5Q99683 1374 aa27.35■■□□□ 1.97
BRAF-202ENST00000469930 HNRNPUQ00839 825 aaKnown RBP eCLIP27.35■■□□□ 1.97
BRAF-202ENST00000469930 C1orf141Q5JVX7 400 aa27.35■■□□□ 1.97
BRAF-202ENST00000469930 TRIM35Q9UPQ4 493 aa27.35■■□□□ 1.97
BRAF-202ENST00000469930 DLG5Q8TDM6 1919 aa27.35■■□□□ 1.97
BRAF-202ENST00000469930 RXRBP28702 533 aa27.34■■□□□ 1.97
BRAF-202ENST00000469930 ADAMTS7Q9UKP4 1686 aa27.33■■□□□ 1.97
BRAF-202ENST00000469930 POTEAQ6S8J7 498 aa27.33■■□□□ 1.97
BRAF-202ENST00000469930 ZNF521Q96K83 1311 aa27.33■■□□□ 1.97
BRAF-202ENST00000469930 RRP7AQ9Y3A4 280 aaKnown RBP27.32■■□□□ 1.96
BRAF-202ENST00000469930 ZBED9Q6R2W3 1325 aa27.32■■□□□ 1.96
BRAF-202ENST00000469930 WWC1Q8IX03 1113 aa27.31■■□□□ 1.96
BRAF-202ENST00000469930 SEPT12Q8IYM1 358 aa27.31■■□□□ 1.96
BRAF-202ENST00000469930 NEUROD2Q15784 382 aa27.3■■□□□ 1.96
BRAF-202ENST00000469930 WDR63Q8IWG1 891 aa27.3■■□□□ 1.96
BRAF-202ENST00000469930 DCAF5Q96JK2 942 aa27.3■■□□□ 1.96
BRAF-202ENST00000469930 CEMIPQ8WUJ3 1361 aa27.3■■□□□ 1.96
BRAF-202ENST00000469930 RTF1Q92541 710 aaKnown RBP27.29■■□□□ 1.96
BRAF-202ENST00000469930 BCL9O00512 1426 aa27.29■■□□□ 1.96
BRAF-202ENST00000469930 CALD1Q05682 793 aaKnown RBP27.27■■□□□ 1.96
BRAF-202ENST00000469930 IL17REQ8NFR9 667 aa27.27■■□□□ 1.96
BRAF-202ENST00000469930 DDX54Q8TDD1 881 aaKnown RBP27.27■■□□□ 1.96
BRAF-202ENST00000469930 IL16Q14005 1332 aa27.26■■□□□ 1.95
BRAF-202ENST00000469930 RNMTO43148 476 aaKnown RBP27.26■■□□□ 1.95
BRAF-202ENST00000469930 PDE3BQ13370 1112 aa27.26■■□□□ 1.95
BRAF-202ENST00000469930 MARCH10Q8NA82 808 aaPredicted RBP27.26■■□□□ 1.95
BRAF-202ENST00000469930 SCN11AQ9UI33 1791 aa27.25■■□□□ 1.95
BRAF-202ENST00000469930 KDM6AO15550 1401 aaPredicted RBP27.24■■□□□ 1.95
BRAF-202ENST00000469930 ERVV-2B6SEH9 535 aa27.24■■□□□ 1.95
BRAF-202ENST00000469930 MPRIPQ6WCQ1 1025 aa27.23■■□□□ 1.95
BRAF-202ENST00000469930 LGR6Q9HBX8 967 aa27.22■■□□□ 1.95
BRAF-202ENST00000469930 BABAM1Q9NWV8 329 aa27.22■■□□□ 1.95
BRAF-202ENST00000469930 MRC1P22897 1456 aa27.21■■□□□ 1.95
BRAF-202ENST00000469930 A0A0G2JS52 829 aa27.21■■□□□ 1.95
BRAF-202ENST00000469930 MYT1Q01538 1121 aa27.21■■□□□ 1.95
BRAF-202ENST00000469930 SALL2Q9Y467 1007 aaPredicted RBP27.21■■□□□ 1.95
BRAF-202ENST00000469930 RGS12O14924 1447 aa27.2■■□□□ 1.94
BRAF-202ENST00000469930 MCM10Q7L590 875 aa27.2■■□□□ 1.94
BRAF-202ENST00000469930 VIRMAQ69YN4 1812 aaKnown RBP27.19■■□□□ 1.94
BRAF-202ENST00000469930 GOLGA2Q08379 1002 aa27.19■■□□□ 1.94
BRAF-202ENST00000469930 DCTN1Q14203 1278 aa27.19■■□□□ 1.94
BRAF-202ENST00000469930 KRT27Q7Z3Y8 459 aa27.19■■□□□ 1.94
BRAF-202ENST00000469930 ZNF853P0CG23 659 aa27.18■■□□□ 1.94
BRAF-202ENST00000469930 BRWD3Q6RI45 1802 aa27.18■■□□□ 1.94
BRAF-202ENST00000469930 CFAP44Q96MT7 982 aa27.17■■□□□ 1.94
BRAF-202ENST00000469930 SLC52A2Q9HAB3 445 aa27.17■■□□□ 1.94
BRAF-202ENST00000469930 IFT57Q9NWB7 429 aa27.17■■□□□ 1.94
BRAF-202ENST00000469930 SENP3-EIF4A1A0A087X0R7 540 aa27.16■■□□□ 1.94
BRAF-202ENST00000469930 TAF7Q15545 349 aaPredicted RBP27.16■■□□□ 1.94
BRAF-202ENST00000469930 YTHDC1Q96MU7 727 aaKnown RBP27.16■■□□□ 1.94
BRAF-202ENST00000469930 SIPA1L3O60292 1781 aaPredicted RBP27.15■■□□□ 1.94
BRAF-202ENST00000469930 GNAI1P63096 354 aa27.15■■□□□ 1.94
BRAF-202ENST00000469930 TEFQ10587 303 aa27.15■■□□□ 1.94
BRAF-202ENST00000469930 TRMT2AQ8IZ69 625 aaKnown RBP27.15■■□□□ 1.94
BRAF-202ENST00000469930 THUMPD2Q9BTF0 503 aaKnown RBP27.15■■□□□ 1.94
BRAF-202ENST00000469930 TOGARAM1Q9Y4F4 1720 aa27.14■■□□□ 1.94
BRAF-202ENST00000469930 E9PSI1 815 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms