RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 PKD1L3Q7Z443 1732 aa19.78■□□□□ 0.76
COL9A3-209ENST00000469852 A0A0G2JS52 829 aa19.77■□□□□ 0.76
COL9A3-209ENST00000469852 MYT1Q01538 1121 aa19.77■□□□□ 0.76
COL9A3-209ENST00000469852 RSPH6AQ9H0K4 717 aa19.77■□□□□ 0.76
COL9A3-209ENST00000469852 EP400Q96L91 3159 aa19.77■□□□□ 0.76
COL9A3-209ENST00000469852 RAPGEF4Q8WZA2 1011 aa19.76■□□□□ 0.75
COL9A3-209ENST00000469852 TATP17735 454 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-209ENST00000469852 PNISRQ8TF01 805 aaKnown RBP19.75■□□□□ 0.75
COL9A3-209ENST00000469852 TNS2Q63HR2 1409 aa19.75■□□□□ 0.75
COL9A3-209ENST00000469852 ADAMTS8Q9UP79 889 aa19.74■□□□□ 0.75
COL9A3-209ENST00000469852 CCER2I3L3R5 266 aa19.73■□□□□ 0.75
COL9A3-209ENST00000469852 PRKAR2BP31323 418 aa19.73■□□□□ 0.75
COL9A3-209ENST00000469852 WDR43Q15061 677 aaKnown RBP eCLIP19.73■□□□□ 0.75
COL9A3-209ENST00000469852 CDCA7Q9BWT1 371 aaPredicted RBP19.73■□□□□ 0.75
COL9A3-209ENST00000469852 DDB1Q16531 1140 aa19.72■□□□□ 0.75
COL9A3-209ENST00000469852 FCHSD2O94868 740 aa19.71■□□□□ 0.75
COL9A3-209ENST00000469852 PHACTR3Q96KR7 559 aa19.71■□□□□ 0.75
COL9A3-209ENST00000469852 SRCAPQ6ZRS2 3230 aa19.7■□□□□ 0.74
COL9A3-209ENST00000469852 EXOC5O00471 708 aa19.7■□□□□ 0.74
COL9A3-209ENST00000469852 FAM182BQ5T319 152 aa19.7■□□□□ 0.74
COL9A3-209ENST00000469852 CCDC125Q86Z20 511 aa19.7■□□□□ 0.74
COL9A3-209ENST00000469852 ZCRB1Q8TBF4 217 aaKnown RBP19.7■□□□□ 0.74
COL9A3-209ENST00000469852 PLEKHF1Q96S99 279 aa19.7■□□□□ 0.74
COL9A3-209ENST00000469852 CCDC146Q8IYE0 955 aa19.69■□□□□ 0.74
COL9A3-209ENST00000469852 MARCH10Q8NA82 808 aaPredicted RBP19.69■□□□□ 0.74
COL9A3-209ENST00000469852 CYP27B1O15528 508 aa19.68■□□□□ 0.74
COL9A3-209ENST00000469852 PLEKHG2Q9H7P9 1386 aa19.68■□□□□ 0.74
COL9A3-209ENST00000469852 MTHFSDQ2M296 383 aaKnown RBP19.67■□□□□ 0.74
COL9A3-209ENST00000469852 KRT27Q7Z3Y8 459 aa19.67■□□□□ 0.74
COL9A3-209ENST00000469852 FAM9BQ8IZU0 186 aa19.67■□□□□ 0.74
COL9A3-209ENST00000469852 DDX54Q8TDD1 881 aaKnown RBP19.67■□□□□ 0.74
COL9A3-209ENST00000469852 PLEKHO1Q53GL0 409 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-209ENST00000469852 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.66■□□□□ 0.741e-6■□□□□ 9.6
COL9A3-209ENST00000469852 SPG7Q9UQ90 795 aa19.66■□□□□ 0.74
COL9A3-209ENST00000469852 PDE3BQ13370 1112 aa19.65■□□□□ 0.74
COL9A3-209ENST00000469852 ZNF530Q6P9A1 599 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-209ENST00000469852 PCDH11XQ9BZA7 1347 aa19.65■□□□□ 0.74
COL9A3-209ENST00000469852 PCDH11YQ9BZA8 1340 aa19.65■□□□□ 0.74
COL9A3-209ENST00000469852 TOGARAM1Q9Y4F4 1720 aa19.65■□□□□ 0.74
COL9A3-209ENST00000469852 DLG5Q8TDM6 1919 aa19.64■□□□□ 0.74
COL9A3-209ENST00000469852 AMOTQ4VCS5 1084 aa19.64■□□□□ 0.73
COL9A3-209ENST00000469852 PHKG2P15735 406 aa19.63■□□□□ 0.73
COL9A3-209ENST00000469852 VIRMAQ69YN4 1812 aaKnown RBP19.62■□□□□ 0.73
COL9A3-209ENST00000469852 DOT1LQ8TEK3 1739 aa19.62■□□□□ 0.73
COL9A3-209ENST00000469852 SENP3-EIF4A1A0A087X0R7 540 aa19.62■□□□□ 0.73
COL9A3-209ENST00000469852 RUNDC1Q96C34 613 aa19.62■□□□□ 0.73
COL9A3-209ENST00000469852 SBF2Q86WG5 1849 aa19.62■□□□□ 0.73
COL9A3-209ENST00000469852 KDM6AO15550 1401 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-209ENST00000469852 MAPK8IP3Q9UPT6 1336 aa19.6■□□□□ 0.73
COL9A3-209ENST00000469852 IFNL2Q8IZJ0 200 aa19.6■□□□□ 0.73
COL9A3-209ENST00000469852 ADAMTS7Q9UKP4 1686 aa19.59■□□□□ 0.73
COL9A3-209ENST00000469852 GAS2L2Q8NHY3 880 aa19.59■□□□□ 0.73
COL9A3-209ENST00000469852 PNNQ9H307 717 aaKnown RBP19.59■□□□□ 0.73
COL9A3-209ENST00000469852 RRP7AQ9Y3A4 280 aaKnown RBP19.59■□□□□ 0.73
COL9A3-209ENST00000469852 SCN11AQ9UI33 1791 aa19.59■□□□□ 0.73
COL9A3-209ENST00000469852 NKX1-1Q15270 411 aaPredicted RBP19.58■□□□□ 0.72
COL9A3-209ENST00000469852 NFE2L2Q16236 605 aa19.58■□□□□ 0.72
COL9A3-209ENST00000469852 AKAP4Q5JQC9 854 aa19.58■□□□□ 0.72
COL9A3-209ENST00000469852 DEFB132Q7Z7B7 95 aa19.58■□□□□ 0.72
COL9A3-209ENST00000469852 MAP3K5Q99683 1374 aa19.57■□□□□ 0.72
COL9A3-209ENST00000469852 APAF1O14727 1248 aa19.57■□□□□ 0.72
COL9A3-209ENST00000469852 C1orf141Q5JVX7 400 aa19.57■□□□□ 0.72
COL9A3-209ENST00000469852 MPRIPQ6WCQ1 1025 aa19.57■□□□□ 0.72
COL9A3-209ENST00000469852 ACSBG1Q96GR2 724 aa19.57■□□□□ 0.72
COL9A3-209ENST00000469852 ITGB4P16144 1822 aa19.57■□□□□ 0.72
COL9A3-209ENST00000469852 BCL9O00512 1426 aa19.57■□□□□ 0.72
COL9A3-209ENST00000469852 NHSQ6T4R5 1651 aa19.56■□□□□ 0.72
COL9A3-209ENST00000469852 NEFMP07197 916 aa19.56■□□□□ 0.72
COL9A3-209ENST00000469852 TMPOP42166 694 aaKnown RBP19.56■□□□□ 0.72
COL9A3-209ENST00000469852 PTF1AQ7RTS3 328 aa19.56■□□□□ 0.72
COL9A3-209ENST00000469852 LGR6Q9HBX8 967 aa19.56■□□□□ 0.72
COL9A3-209ENST00000469852 KAT6BQ8WYB5 2073 aa19.55■□□□□ 0.72
COL9A3-209ENST00000469852 GNAT3A8MTJ3 354 aa19.54■□□□□ 0.72
COL9A3-209ENST00000469852 KCNQ2O43526 872 aa19.54■□□□□ 0.72
COL9A3-209ENST00000469852 DCTN1Q14203 1278 aa19.54■□□□□ 0.72
COL9A3-209ENST00000469852 NEUROD2Q15784 382 aa19.54■□□□□ 0.72
COL9A3-209ENST00000469852 FAM196AQ6ZSG2 479 aa19.54■□□□□ 0.72
COL9A3-209ENST00000469852 RNMTO43148 476 aaKnown RBP19.53■□□□□ 0.72
COL9A3-209ENST00000469852 RIPK4P57078 832 aa19.53■□□□□ 0.72
COL9A3-209ENST00000469852 MCM10Q7L590 875 aa19.53■□□□□ 0.72
COL9A3-209ENST00000469852 IL17REQ8NFR9 667 aa19.53■□□□□ 0.72
COL9A3-209ENST00000469852 DCAF5Q96JK2 942 aa19.53■□□□□ 0.72
COL9A3-209ENST00000469852 TNS1Q9HBL0 1735 aaKnown RBP19.53■□□□□ 0.72
COL9A3-209ENST00000469852 SIPA1L3O60292 1781 aaPredicted RBP19.52■□□□□ 0.71
COL9A3-209ENST00000469852 TRIM37O94972 964 aa19.51■□□□□ 0.71
COL9A3-209ENST00000469852 HSP90AB1P08238 724 aaKnown RBP19.51■□□□□ 0.71
COL9A3-209ENST00000469852 PRIM1P49642 420 aaKnown RBP19.51■□□□□ 0.71
COL9A3-209ENST00000469852 THUMPD2Q9BTF0 503 aaKnown RBP19.51■□□□□ 0.71
COL9A3-209ENST00000469852 TRIM35Q9UPQ4 493 aa19.51■□□□□ 0.71
COL9A3-209ENST00000469852 MRC1P22897 1456 aa19.51■□□□□ 0.71
COL9A3-209ENST00000469852 BTAF1O14981 1849 aa19.51■□□□□ 0.71
COL9A3-209ENST00000469852 CEMIPQ8WUJ3 1361 aa19.5■□□□□ 0.71
COL9A3-209ENST00000469852 SF3B2Q13435 895 aaKnown RBP19.5■□□□□ 0.71
COL9A3-209ENST00000469852 SYTL4Q96C24 671 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-209ENST00000469852 SALL2Q9Y467 1007 aaPredicted RBP19.48■□□□□ 0.71
COL9A3-209ENST00000469852 ERVV-2B6SEH9 535 aa19.47■□□□□ 0.71
COL9A3-209ENST00000469852 HTATSF1O43719 755 aaKnown RBP19.47■□□□□ 0.71
COL9A3-209ENST00000469852 PIGBQ92521 554 aa19.47■□□□□ 0.71
COL9A3-209ENST00000469852 RTF1Q92541 710 aaKnown RBP19.47■□□□□ 0.71
COL9A3-209ENST00000469852 NFATC2IPQ8NCF5 419 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms