RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 GOLGB1Q14789 3259 aaKnown RBP25.94■■□□□ 1.74
TTC28-205ENST00000469670 A0A1W2PP64 1363 aa25.94■■□□□ 1.74
TTC28-205ENST00000469670 NSD2O96028 1365 aa25.94■■□□□ 1.74
TTC28-205ENST00000469670 YBX3P16989 372 aaKnown RBP eCLIP25.93■■□□□ 1.74
TTC28-205ENST00000469670 MSH5O43196 834 aa25.92■■□□□ 1.74
TTC28-205ENST00000469670 CARD11Q9BXL7 1154 aa25.92■■□□□ 1.74
TTC28-205ENST00000469670 CCNL1Q9UK58 526 aaPredicted RBP25.92■■□□□ 1.74
TTC28-205ENST00000469670 TUBGCP6Q96RT7 1819 aa25.91■■□□□ 1.74
TTC28-205ENST00000469670 ZCRB1Q8TBF4 217 aaKnown RBP25.91■■□□□ 1.74
TTC28-205ENST00000469670 COL23A1Q86Y22 540 aaPredicted RBP25.9■■□□□ 1.74
TTC28-205ENST00000469670 FAM208AQ9UK61 1670 aaKnown RBP25.9■■□□□ 1.74
TTC28-205ENST00000469670 DOT1LQ8TEK3 1739 aa25.88■■□□□ 1.73
TTC28-205ENST00000469670 HOXC9P31274 260 aa25.88■■□□□ 1.73
TTC28-205ENST00000469670 LY75O60449 1722 aa25.88■■□□□ 1.73
TTC28-205ENST00000469670 MAP3K19Q56UN5 1328 aa25.88■■□□□ 1.73
TTC28-205ENST00000469670 USP47Q96K76 1375 aa25.86■■□□□ 1.73
TTC28-205ENST00000469670 AMPHP49418 695 aa25.86■■□□□ 1.73
TTC28-205ENST00000469670 MSL1Q68DK7 614 aa25.86■■□□□ 1.73
TTC28-205ENST00000469670 PUS7Q96PZ0 661 aaKnown RBP25.86■■□□□ 1.73
TTC28-205ENST00000469670 MEGF6O75095 1541 aa25.85■■□□□ 1.73
TTC28-205ENST00000469670 COG3Q96JB2 828 aa25.85■■□□□ 1.73
TTC28-205ENST00000469670 ATP10DQ9P241 1426 aa25.84■■□□□ 1.73
TTC28-205ENST00000469670 FBLN1P23142 703 aa25.83■■□□□ 1.73
TTC28-205ENST00000469670 CEP350Q5VT06 3117 aa25.82■■□□□ 1.72
TTC28-205ENST00000469670 CD2APQ9Y5K6 639 aa25.8■■□□□ 1.72
TTC28-205ENST00000469670 NBPF6Q5VWK0 638 aa25.78■■□□□ 1.72
TTC28-205ENST00000469670 NBPF4Q96M43 638 aa25.78■■□□□ 1.72
TTC28-205ENST00000469670 GPBP1L1Q9HC44 474 aaPredicted RBP25.78■■□□□ 1.72
TTC28-205ENST00000469670 CGNL1Q0VF96 1302 aa25.78■■□□□ 1.72
TTC28-205ENST00000469670 FLAD1Q8NFF5 587 aa25.77■■□□□ 1.72
TTC28-205ENST00000469670 USHBP1Q8N6Y0 703 aa25.76■■□□□ 1.71
TTC28-205ENST00000469670 RAPGEF4Q8WZA2 1011 aa25.76■■□□□ 1.71
TTC28-205ENST00000469670 RTL1A6NKG5 1358 aa25.76■■□□□ 1.71
TTC28-205ENST00000469670 HMGB2P26583 209 aaKnown RBP25.75■■□□□ 1.71
TTC28-205ENST00000469670 RRS1Q15050 365 aaKnown RBP25.74■■□□□ 1.71
TTC28-205ENST00000469670 RGPD2P0DJD1 1756 aa25.74■■□□□ 1.71
TTC28-205ENST00000469670 ADCY9O60503 1353 aa25.73■■□□□ 1.71
TTC28-205ENST00000469670 PALLDQ8WX93 1383 aa25.73■■□□□ 1.71
TTC28-205ENST00000469670 TATP17735 454 aaPredicted RBP25.73■■□□□ 1.71
TTC28-205ENST00000469670 ZNF526Q8TF50 670 aaPredicted RBP25.72■■□□□ 1.71
TTC28-205ENST00000469670 HSPA6P17066 643 aa25.71■■□□□ 1.71
TTC28-205ENST00000469670 TESK2Q96S53 571 aa25.71■■□□□ 1.71
TTC28-205ENST00000469670 SMG6Q86US8 1419 aaKnown RBP25.71■■□□□ 1.71
TTC28-205ENST00000469670 C5P01031 1676 aa25.71■■□□□ 1.71
TTC28-205ENST00000469670 PCDH11XQ9BZA7 1347 aa25.7■■□□□ 1.71
TTC28-205ENST00000469670 PCDH11YQ9BZA8 1340 aa25.7■■□□□ 1.71
TTC28-205ENST00000469670 MPRIPQ6WCQ1 1025 aa25.7■■□□□ 1.7
TTC28-205ENST00000469670 ST20-MTHFSA0A0A6YYL1 179 aa25.67■■□□□ 1.7
TTC28-205ENST00000469670 AK7Q96M32 723 aa25.67■■□□□ 1.7
TTC28-205ENST00000469670 IGSF1Q8N6C5 1336 aa25.66■■□□□ 1.7
TTC28-205ENST00000469670 FYB1O15117 783 aa25.66■■□□□ 1.7
TTC28-205ENST00000469670 AMIGO3Q86WK7 504 aa25.66■■□□□ 1.7
TTC28-205ENST00000469670 GGNBP2Q9H3C7 697 aa25.66■■□□□ 1.7
TTC28-205ENST00000469670 SMARCC1Q92922 1105 aaPredicted RBP25.65■■□□□ 1.7
TTC28-205ENST00000469670 WWC3Q9ULE0 1092 aa25.65■■□□□ 1.7
TTC28-205ENST00000469670 CYP27B1O15528 508 aa25.64■■□□□ 1.7
TTC28-205ENST00000469670 SLC24A1O60721 1099 aa25.64■■□□□ 1.7
TTC28-205ENST00000469670 PHF14O94880 888 aa25.64■■□□□ 1.7
TTC28-205ENST00000469670 HSP90AB2PQ58FF8 381 aa25.64■■□□□ 1.7
TTC28-205ENST00000469670 INSRP06213 1382 aa25.63■■□□□ 1.69
TTC28-205ENST00000469670 TONSLQ96HA7 1378 aa25.63■■□□□ 1.69
TTC28-205ENST00000469670 C4BP0C0L5 1744 aa25.63■■□□□ 1.69
TTC28-205ENST00000469670 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.62■■□□□ 1.69
TTC28-205ENST00000469670 SMIM5Q71RC9 77 aa25.62■■□□□ 1.69
TTC28-205ENST00000469670 TAF1LQ8IZX4 1826 aa25.61■■□□□ 1.69
TTC28-205ENST00000469670 NSD3Q9BZ95 1437 aa25.61■■□□□ 1.69
TTC28-205ENST00000469670 FLT4P35916 1363 aa25.59■■□□□ 1.69
TTC28-205ENST00000469670 PIGBQ92521 554 aa25.59■■□□□ 1.69
TTC28-205ENST00000469670 TOGARAM1Q9Y4F4 1720 aa25.58■■□□□ 1.69
TTC28-205ENST00000469670 KIF3CO14782 793 aa25.58■■□□□ 1.69
TTC28-205ENST00000469670 SSFA2P28290 1259 aa25.58■■□□□ 1.69
TTC28-205ENST00000469670 KIF24Q5T7B8 1368 aa25.56■■□□□ 1.68
TTC28-205ENST00000469670 LOC102724428A0A0B4J2F2 783 aa25.55■■□□□ 1.68
TTC28-205ENST00000469670 SIK1P57059 783 aa25.55■■□□□ 1.68
TTC28-205ENST00000469670 LINC00116Q8NCU8 138 aa25.55■■□□□ 1.68
TTC28-205ENST00000469670 NKX1-1Q15270 411 aaPredicted RBP25.54■■□□□ 1.68
TTC28-205ENST00000469670 UBR3Q6ZT12 1888 aa25.53■■□□□ 1.68
TTC28-205ENST00000469670 TMF1P82094 1093 aa25.52■■□□□ 1.68
TTC28-205ENST00000469670 GNPATO15228 680 aa25.51■■□□□ 1.67
TTC28-205ENST00000469670 SPG7Q9UQ90 795 aa25.51■■□□□ 1.67
TTC28-205ENST00000469670 ITGB4P16144 1822 aa25.51■■□□□ 1.67
TTC28-205ENST00000469670 EMILIN1Q9Y6C2 1016 aa25.5■■□□□ 1.67
TTC28-205ENST00000469670 PKD1L3Q7Z443 1732 aa25.49■■□□□ 1.67
TTC28-205ENST00000469670 ITPK1Q13572 414 aa25.49■■□□□ 1.67
TTC28-205ENST00000469670 TMOD3Q9NYL9 352 aa25.49■■□□□ 1.67
TTC28-205ENST00000469670 CICQ96RK0 1608 aaPredicted RBP25.48■■□□□ 1.67
TTC28-205ENST00000469670 NCAPD2Q15021 1401 aa25.48■■□□□ 1.67
TTC28-205ENST00000469670 MMP10P09238 476 aa25.48■■□□□ 1.67
TTC28-205ENST00000469670 APLP1P51693 650 aa25.48■■□□□ 1.67
TTC28-205ENST00000469670 ASAP1Q9ULH1 1129 aa25.48■■□□□ 1.67
TTC28-205ENST00000469670 MAP2P11137 1827 aaKnown RBP25.47■■□□□ 1.67
TTC28-205ENST00000469670 ATP6V1AP38606 617 aa25.47■■□□□ 1.67
TTC28-205ENST00000469670 PXDNLA1KZ92 1463 aa25.47■■□□□ 1.67
TTC28-205ENST00000469670 PPM1GO15355 546 aaPredicted RBP25.45■■□□□ 1.66
TTC28-205ENST00000469670 TOMM70O94826 608 aa25.44■■□□□ 1.66
TTC28-205ENST00000469670 TGFB2P61812 414 aa25.44■■□□□ 1.66
TTC28-205ENST00000469670 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.44■■□□□ 1.66
TTC28-205ENST00000469670 BCS1LQ9Y276 419 aa25.44■■□□□ 1.66
TTC28-205ENST00000469670 KIF20BQ96Q89 1820 aa25.44■■□□□ 1.66
TTC28-205ENST00000469670 PHKG2P15735 406 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms