RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 PRSS12P56730 875 aa7.26□□□□□ -1.25
ITGA6-208ENST00000469534 PACS2Q86VP3 889 aa7.26□□□□□ -1.25
ITGA6-208ENST00000469534 CDCA7LQ96GN5 454 aa7.26□□□□□ -1.25
ITGA6-208ENST00000469534 AMOTL2Q9Y2J4 779 aa7.26□□□□□ -1.25
ITGA6-208ENST00000469534 TULP4Q9NRJ4 1543 aa7.26□□□□□ -1.25
ITGA6-208ENST00000469534 MYOM1P52179 1685 aa7.25□□□□□ -1.25
ITGA6-208ENST00000469534 ROBO2Q9HCK4 1378 aa7.25□□□□□ -1.25
ITGA6-208ENST00000469534 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.25□□□□□ -1.25
ITGA6-208ENST00000469534 TMF1P82094 1093 aa7.25□□□□□ -1.25
ITGA6-208ENST00000469534 RGPD8O14715 1765 aaPredicted RBP7.25□□□□□ -1.25
ITGA6-208ENST00000469534 DIP2AQ14689 1571 aa7.25□□□□□ -1.25
ITGA6-208ENST00000469534 MED14O60244 1454 aa7.24□□□□□ -1.25
ITGA6-208ENST00000469534 XRN1Q8IZH2 1706 aaKnown RBP7.24□□□□□ -1.25
ITGA6-208ENST00000469534 CPS1P31327 1500 aa7.24□□□□□ -1.25
ITGA6-208ENST00000469534 KCNA6P17658 529 aa7.24□□□□□ -1.25
ITGA6-208ENST00000469534 WBP1LQ9NX94 342 aa7.24□□□□□ -1.25
ITGA6-208ENST00000469534 C3orf80F5H4A9 247 aa7.23□□□□□ -1.25
ITGA6-208ENST00000469534 SRPK2P78362 688 aaKnown RBP7.23□□□□□ -1.25
ITGA6-208ENST00000469534 TMC1Q8TDI8 760 aa7.23□□□□□ -1.25
ITGA6-208ENST00000469534 ARHGEF1Q92888 912 aaKnown RBP7.23□□□□□ -1.25
ITGA6-208ENST00000469534 CDHR5Q9HBB8 845 aa7.23□□□□□ -1.25
ITGA6-208ENST00000469534 TBX22Q9Y458 520 aa7.23□□□□□ -1.25
ITGA6-208ENST00000469534 NALCNQ8IZF0 1738 aa7.23□□□□□ -1.25
ITGA6-208ENST00000469534 DLC1Q96QB1 1528 aa7.22□□□□□ -1.25
ITGA6-208ENST00000469534 ABCC11Q96J66 1382 aa7.22□□□□□ -1.25
ITGA6-208ENST00000469534 NPDC1Q9NQX5 325 aaPredicted RBP7.22□□□□□ -1.25
ITGA6-208ENST00000469534 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.22□□□□□ -1.25
ITGA6-208ENST00000469534 TSR3Q9UJK0 312 aaKnown RBP7.22□□□□□ -1.25
ITGA6-208ENST00000469534 KCNC4Q03721 635 aa7.21□□□□□ -1.26
ITGA6-208ENST00000469534 C14orf37Q86TY3 774 aa7.21□□□□□ -1.26
ITGA6-208ENST00000469534 TATDN2Q93075 761 aa7.21□□□□□ -1.26
ITGA6-208ENST00000469534 LRCH3Q96II8 777 aa7.21□□□□□ -1.26
ITGA6-208ENST00000469534 CDK19Q9BWU1 502 aa7.21□□□□□ -1.26
ITGA6-208ENST00000469534 RBM27Q9P2N5 1060 aaKnown RBP7.21□□□□□ -1.26
ITGA6-208ENST00000469534 EVC2Q86UK5 1308 aa7.21□□□□□ -1.26
ITGA6-208ENST00000469534 XIRP1Q702N8 1843 aaKnown RBP7.2□□□□□ -1.26
ITGA6-208ENST00000469534 SMAPO00193 183 aa7.2□□□□□ -1.26
ITGA6-208ENST00000469534 PROSER2Q86WR7 435 aaPredicted RBP7.2□□□□□ -1.26
ITGA6-208ENST00000469534 TTC13Q8NBP0 860 aa7.2□□□□□ -1.26
ITGA6-208ENST00000469534 KCNV2Q8TDN2 545 aa7.2□□□□□ -1.26
ITGA6-208ENST00000469534 SLC12A5Q9H2X9 1139 aa7.2□□□□□ -1.26
ITGA6-208ENST00000469534 PANK3Q9H999 370 aa7.2□□□□□ -1.26
ITGA6-208ENST00000469534 ZNF335Q9H4Z2 1342 aaPredicted RBP7.2□□□□□ -1.26
ITGA6-208ENST00000469534 TECPR2O15040 1411 aa7.19□□□□□ -1.26
ITGA6-208ENST00000469534 HPS5Q9UPZ3 1129 aa7.19□□□□□ -1.26
ITGA6-208ENST00000469534 NWD1Q149M9 1564 aa7.19□□□□□ -1.26
ITGA6-208ENST00000469534 USP32Q8NFA0 1604 aa7.19□□□□□ -1.26
ITGA6-208ENST00000469534 ITSN1Q15811 1721 aa7.18□□□□□ -1.26
ITGA6-208ENST00000469534 WASLO00401 505 aaPredicted RBP7.18□□□□□ -1.26
ITGA6-208ENST00000469534 CC2D1BQ5T0F9 858 aaKnown RBP7.18□□□□□ -1.26
ITGA6-208ENST00000469534 PNMA3Q9UL41 463 aa7.18□□□□□ -1.26
ITGA6-208ENST00000469534 PRR36Q9H6K5 1346 aa7.18□□□□□ -1.26
ITGA6-208ENST00000469534 FMN2Q9NZ56 1722 aa7.18□□□□□ -1.26
ITGA6-208ENST00000469534 PTCH1Q13635 1447 aa7.18□□□□□ -1.26
ITGA6-208ENST00000469534 FAM135BQ49AJ0 1406 aa7.18□□□□□ -1.26
ITGA6-208ENST00000469534 NBPF26B4DH59 902 aa7.17□□□□□ -1.26
ITGA6-208ENST00000469534 ANP32CO43423 234 aa7.17□□□□□ -1.26
ITGA6-208ENST00000469534 MLLT3P42568 568 aaPredicted RBP7.17□□□□□ -1.26
ITGA6-208ENST00000469534 CDCA8Q53HL2 280 aa7.17□□□□□ -1.26
ITGA6-208ENST00000469534 Q6ZNB5 142 aa7.17□□□□□ -1.26
ITGA6-208ENST00000469534 SAMD7Q7Z3H4 446 aa7.17□□□□□ -1.26
ITGA6-208ENST00000469534 PMFBP1Q8TBY8 1022 aa7.17□□□□□ -1.26
ITGA6-208ENST00000469534 NUDT16Q96DE0 195 aaKnown RBP7.17□□□□□ -1.26
ITGA6-208ENST00000469534 PIK3R4Q99570 1358 aa7.17□□□□□ -1.26
ITGA6-208ENST00000469534 SBNO2Q9Y2G9 1366 aa7.17□□□□□ -1.26
ITGA6-208ENST00000469534 ADGRB2O60241 1585 aa7.16□□□□□ -1.26
ITGA6-208ENST00000469534 TOPAZ1Q8N9V7 1692 aa7.16□□□□□ -1.26
ITGA6-208ENST00000469534 AKAP12Q02952 1782 aa7.16□□□□□ -1.26
ITGA6-208ENST00000469534 NUDT18Q6ZVK8 323 aa7.16□□□□□ -1.26
ITGA6-208ENST00000469534 CABP1Q9NZU7 370 aa7.16□□□□□ -1.26
ITGA6-208ENST00000469534 TMEM94Q12767 1356 aa7.16□□□□□ -1.26
ITGA6-208ENST00000469534 PPIP5K1Q6PFW1 1433 aa7.16□□□□□ -1.26
ITGA6-208ENST00000469534 NSD3Q9BZ95 1437 aa7.16□□□□□ -1.26
ITGA6-208ENST00000469534 NKTRP30414 1462 aaKnown RBP7.16□□□□□ -1.26
ITGA6-208ENST00000469534 KIF20BQ96Q89 1820 aa7.15□□□□□ -1.26
ITGA6-208ENST00000469534 PPP4CP60510 307 aa7.15□□□□□ -1.26
ITGA6-208ENST00000469534 PADI6Q6TGC4 694 aa7.15□□□□□ -1.26
ITGA6-208ENST00000469534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.15□□□□□ -1.26
ITGA6-208ENST00000469534 SIRT1Q96EB6 747 aa7.15□□□□□ -1.26
ITGA6-208ENST00000469534 YTHDC1Q96MU7 727 aaKnown RBP7.15□□□□□ -1.26
ITGA6-208ENST00000469534 CARD14Q9BXL6 1004 aa7.15□□□□□ -1.26
ITGA6-208ENST00000469534 ATP7BP35670 1465 aa7.15□□□□□ -1.27
ITGA6-208ENST00000469534 A0A1W2PP64 1363 aa7.14□□□□□ -1.27
ITGA6-208ENST00000469534 TNNT2P45379 298 aaPredicted RBP7.14□□□□□ -1.27
ITGA6-208ENST00000469534 XPCQ01831 940 aaPredicted RBP7.14□□□□□ -1.27
ITGA6-208ENST00000469534 CCDC184Q52MB2 194 aa7.14□□□□□ -1.27
ITGA6-208ENST00000469534 ATAD2Q6PL18 1390 aa7.14□□□□□ -1.27
ITGA6-208ENST00000469534 MON2Q7Z3U7 1717 aa7.14□□□□□ -1.27
ITGA6-208ENST00000469534 ADGRL3Q9HAR2 1447 aa7.14□□□□□ -1.27
ITGA6-208ENST00000469534 KNSTRNQ9Y448 316 aa7.14□□□□□ -1.27
ITGA6-208ENST00000469534 CDC42BPGQ6DT37 1551 aa7.13□□□□□ -1.27
ITGA6-208ENST00000469534 LRRC7Q96NW7 1537 aa7.13□□□□□ -1.27
ITGA6-208ENST00000469534 CD163L1Q9NR16 1453 aa7.13□□□□□ -1.27
ITGA6-208ENST00000469534 SENP3-EIF4A1A0A087X0R7 540 aa7.13□□□□□ -1.27
ITGA6-208ENST00000469534 DDX17Q92841 729 aaKnown RBP7.13□□□□□ -1.27
ITGA6-208ENST00000469534 EYA1Q99502 592 aa7.13□□□□□ -1.27
ITGA6-208ENST00000469534 KTN1Q86UP2 1357 aaKnown RBP7.12□□□□□ -1.27
ITGA6-208ENST00000469534 ANKRD36BQ8N2N9 1353 aa7.12□□□□□ -1.27
ITGA6-208ENST00000469534 ACEP12821 1306 aa7.12□□□□□ -1.27
ITGA6-208ENST00000469534 PER1O15534 1290 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms