RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 ZNF784Q8NCA9 323 aaPredicted RBP17.68■□□□□ 0.42
GAPVD1-214ENST00000469528 BTAF1O14981 1849 aa17.68■□□□□ 0.42
GAPVD1-214ENST00000469528 FAM208AQ9UK61 1670 aaKnown RBP17.67■□□□□ 0.42
GAPVD1-214ENST00000469528 RTL1A6NKG5 1358 aa17.67■□□□□ 0.42
GAPVD1-214ENST00000469528 TATP17735 454 aaPredicted RBP17.67■□□□□ 0.42
GAPVD1-214ENST00000469528 NBPF6Q5VWK0 638 aa17.67■□□□□ 0.42
GAPVD1-214ENST00000469528 NBPF4Q96M43 638 aa17.67■□□□□ 0.42
GAPVD1-214ENST00000469528 CCNL1Q9UK58 526 aaPredicted RBP17.67■□□□□ 0.42
GAPVD1-214ENST00000469528 MYOM1P52179 1685 aa17.67■□□□□ 0.42
GAPVD1-214ENST00000469528 USP47Q96K76 1375 aa17.66■□□□□ 0.42
GAPVD1-214ENST00000469528 FBLN1P23142 703 aa17.66■□□□□ 0.42
GAPVD1-214ENST00000469528 GGNBP2Q9H3C7 697 aa17.66■□□□□ 0.42
GAPVD1-214ENST00000469528 MSH5O43196 834 aa17.65■□□□□ 0.42
GAPVD1-214ENST00000469528 RRS1Q15050 365 aaKnown RBP17.65■□□□□ 0.42
GAPVD1-214ENST00000469528 KLHL34Q8N239 644 aa17.65■□□□□ 0.42
GAPVD1-214ENST00000469528 PNPLA7Q6ZV29 1317 aa17.65■□□□□ 0.42
GAPVD1-214ENST00000469528 FLAD1Q8NFF5 587 aa17.64■□□□□ 0.41
GAPVD1-214ENST00000469528 KIF24Q5T7B8 1368 aa17.63■□□□□ 0.41
GAPVD1-214ENST00000469528 PAPPAQ13219 1627 aa17.62■□□□□ 0.41
GAPVD1-214ENST00000469528 PCDH11XQ9BZA7 1347 aa17.62■□□□□ 0.41
GAPVD1-214ENST00000469528 PCDH11YQ9BZA8 1340 aa17.62■□□□□ 0.41
GAPVD1-214ENST00000469528 GRIN3BO60391 1043 aa17.61■□□□□ 0.41
GAPVD1-214ENST00000469528 KCNQ4P56696 695 aa17.61■□□□□ 0.41
GAPVD1-214ENST00000469528 TRIM26Q12899 539 aaPredicted RBP17.61■□□□□ 0.41
GAPVD1-214ENST00000469528 TIMELESSQ9UNS1 1208 aa17.61■□□□□ 0.41
GAPVD1-214ENST00000469528 INSRP06213 1382 aa17.61■□□□□ 0.41
GAPVD1-214ENST00000469528 HSP90AB2PQ58FF8 381 aa17.6■□□□□ 0.41
GAPVD1-214ENST00000469528 PELP1Q8IZL8 1130 aaKnown RBP17.6■□□□□ 0.41
GAPVD1-214ENST00000469528 SMARCC1Q92922 1105 aaPredicted RBP17.6■□□□□ 0.41
GAPVD1-214ENST00000469528 CHD4Q14839 1912 aa17.59■□□□□ 0.41
GAPVD1-214ENST00000469528 FLT4P35916 1363 aa17.59■□□□□ 0.41
GAPVD1-214ENST00000469528 USHBP1Q8N6Y0 703 aa17.59■□□□□ 0.41
GAPVD1-214ENST00000469528 MPRIPQ6WCQ1 1025 aa17.58■□□□□ 0.4
GAPVD1-214ENST00000469528 SPG7Q9UQ90 795 aa17.58■□□□□ 0.4
GAPVD1-214ENST00000469528 MEGF6O75095 1541 aa17.57■□□□□ 0.4
GAPVD1-214ENST00000469528 NSD2O96028 1365 aa17.57■□□□□ 0.4
GAPVD1-214ENST00000469528 COL23A1Q86Y22 540 aaPredicted RBP17.57■□□□□ 0.4
GAPVD1-214ENST00000469528 QSER1Q2KHR3 1735 aa17.57■□□□□ 0.4
GAPVD1-214ENST00000469528 PPM1GO15355 546 aaPredicted RBP17.55■□□□□ 0.4
GAPVD1-214ENST00000469528 C1QTNF8P60827 252 aa17.55■□□□□ 0.4
GAPVD1-214ENST00000469528 CD2APQ9Y5K6 639 aa17.54■□□□□ 0.4
GAPVD1-214ENST00000469528 LY75O60449 1722 aa17.53■□□□□ 0.4
GAPVD1-214ENST00000469528 AK7Q96M32 723 aa17.53■□□□□ 0.4
GAPVD1-214ENST00000469528 CARD14Q9BXL6 1004 aa17.53■□□□□ 0.4
GAPVD1-214ENST00000469528 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.53■□□□□ 0.4
GAPVD1-214ENST00000469528 UTRNP46939 3433 aa17.53■□□□□ 0.4
GAPVD1-214ENST00000469528 DOT1LQ8TEK3 1739 aa17.52■□□□□ 0.4
GAPVD1-214ENST00000469528 CYP27B1O15528 508 aa17.52■□□□□ 0.4
GAPVD1-214ENST00000469528 NKX1-1Q15270 411 aaPredicted RBP17.52■□□□□ 0.4
GAPVD1-214ENST00000469528 NLGN2Q8NFZ4 835 aa17.52■□□□□ 0.4
GAPVD1-214ENST00000469528 RGPD2P0DJD1 1756 aa17.52■□□□□ 0.4
GAPVD1-214ENST00000469528 PALLDQ8WX93 1383 aa17.52■□□□□ 0.39
GAPVD1-214ENST00000469528 WASHC2AQ641Q2 1341 aa17.51■□□□□ 0.39
GAPVD1-214ENST00000469528 GIGYF1O75420 1035 aaPredicted RBP17.51■□□□□ 0.39
GAPVD1-214ENST00000469528 SENP3-EIF4A1A0A087X0R7 540 aa17.5■□□□□ 0.39
GAPVD1-214ENST00000469528 EMILIN1Q9Y6C2 1016 aa17.5■□□□□ 0.39
GAPVD1-214ENST00000469528 COL24A1Q17RW2 1714 aa17.5■□□□□ 0.39
GAPVD1-214ENST00000469528 NSD3Q9BZ95 1437 aa17.49■□□□□ 0.39
GAPVD1-214ENST00000469528 MSL1Q68DK7 614 aa17.49■□□□□ 0.39
GAPVD1-214ENST00000469528 IFNL2Q8IZJ0 200 aa17.49■□□□□ 0.39
GAPVD1-214ENST00000469528 PIGBQ92521 554 aa17.49■□□□□ 0.39
GAPVD1-214ENST00000469528 TMOD3Q9NYL9 352 aa17.49■□□□□ 0.39
GAPVD1-214ENST00000469528 SHANK3Q9BYB0 1731 aa17.47■□□□□ 0.39
GAPVD1-214ENST00000469528 EYA1Q99502 592 aa17.47■□□□□ 0.39
GAPVD1-214ENST00000469528 LOC102724428A0A0B4J2F2 783 aa17.46■□□□□ 0.39
GAPVD1-214ENST00000469528 SSFA2P28290 1259 aa17.46■□□□□ 0.39
GAPVD1-214ENST00000469528 SIK1P57059 783 aa17.46■□□□□ 0.39
GAPVD1-214ENST00000469528 CLSPNQ9HAW4 1339 aa17.46■□□□□ 0.38
GAPVD1-214ENST00000469528 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.45■□□□□ 0.38
GAPVD1-214ENST00000469528 YBX3P16989 372 aaKnown RBP eCLIP17.45■□□□□ 0.38
GAPVD1-214ENST00000469528 POLKQ9UBT6 870 aa17.45■□□□□ 0.38
GAPVD1-214ENST00000469528 KIF20BQ96Q89 1820 aa17.44■□□□□ 0.38
GAPVD1-214ENST00000469528 PHF14O94880 888 aa17.44■□□□□ 0.38
GAPVD1-214ENST00000469528 HSP90AB1P08238 724 aaKnown RBP17.44■□□□□ 0.38
GAPVD1-214ENST00000469528 ATP6V1AP38606 617 aa17.44■□□□□ 0.38
GAPVD1-214ENST00000469528 POLR3GLQ9BT43 218 aa17.44■□□□□ 0.38
GAPVD1-214ENST00000469528 TUBGCP6Q96RT7 1819 aa17.43■□□□□ 0.38
GAPVD1-214ENST00000469528 PHKG2P15735 406 aa17.42■□□□□ 0.38
GAPVD1-214ENST00000469528 C5P01031 1676 aa17.42■□□□□ 0.38
GAPVD1-214ENST00000469528 PLEKHG2Q9H7P9 1386 aa17.41■□□□□ 0.38
GAPVD1-214ENST00000469528 ERVV-2B6SEH9 535 aa17.41■□□□□ 0.38
GAPVD1-214ENST00000469528 PLEKHO1Q53GL0 409 aaPredicted RBP17.41■□□□□ 0.38
GAPVD1-214ENST00000469528 ASAP1Q9ULH1 1129 aa17.41■□□□□ 0.38
GAPVD1-214ENST00000469528 NCAPD2Q15021 1401 aa17.4■□□□□ 0.38
GAPVD1-214ENST00000469528 TRAPPC3LQ5T215 181 aa17.4■□□□□ 0.38
GAPVD1-214ENST00000469528 GPBP1L1Q9HC44 474 aaPredicted RBP17.4■□□□□ 0.38
GAPVD1-214ENST00000469528 GNPATO15228 680 aa17.39■□□□□ 0.37
GAPVD1-214ENST00000469528 TNNT2P45379 298 aaPredicted RBP17.39■□□□□ 0.37
GAPVD1-214ENST00000469528 EIF4G2P78344 907 aaKnown RBP eCLIP17.39■□□□□ 0.37
GAPVD1-214ENST00000469528 EIF4A2Q14240 407 aaKnown RBP17.39■□□□□ 0.37
GAPVD1-214ENST00000469528 AMOTQ4VCS5 1084 aa17.39■□□□□ 0.37
GAPVD1-214ENST00000469528 NLGN1Q8N2Q7 840 aa17.39■□□□□ 0.37
GAPVD1-214ENST00000469528 LINC00116Q8NCU8 138 aa17.39■□□□□ 0.37
GAPVD1-214ENST00000469528 DCAF5Q96JK2 942 aa17.39■□□□□ 0.37
GAPVD1-214ENST00000469528 RTCBQ9Y3I0 505 aaKnown RBP17.39■□□□□ 0.37
GAPVD1-214ENST00000469528 GOLGB1Q14789 3259 aaKnown RBP17.38■□□□□ 0.37
GAPVD1-214ENST00000469528 MAP2P11137 1827 aaKnown RBP17.38■□□□□ 0.37
GAPVD1-214ENST00000469528 ATG3Q9NT62 314 aa17.38■□□□□ 0.37
GAPVD1-214ENST00000469528 C4BP0C0L5 1744 aa17.38■□□□□ 0.37
GAPVD1-214ENST00000469528 ITGB4P16144 1822 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms