RNA–Protein interactions for RNA: ENST00000469507.1

FAM49A-205, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 2

Gene FAM49A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-205ENST00000469507 ZNF592Q92610 1267 aa7.74□□□□□ -1.17
FAM49A-205ENST00000469507 ATP13A2Q9NQ11 1180 aa7.74□□□□□ -1.17
FAM49A-205ENST00000469507 WNT7AO00755 349 aa7.73□□□□□ -1.17
FAM49A-205ENST00000469507 ZBTB24O43167 697 aaPredicted RBP7.73□□□□□ -1.17
FAM49A-205ENST00000469507 TCF3P15923 654 aa7.73□□□□□ -1.17
FAM49A-205ENST00000469507 SERPINB4P48594 390 aa7.73□□□□□ -1.17
FAM49A-205ENST00000469507 INSM1Q01101 510 aaPredicted RBP7.73□□□□□ -1.17
FAM49A-205ENST00000469507 SWI5Q1ZZU3 235 aa7.73□□□□□ -1.17
FAM49A-205ENST00000469507 ZNF326Q5BKZ1 582 aaKnown RBP7.73□□□□□ -1.17
FAM49A-205ENST00000469507 RNF19BQ6ZMZ0 732 aa7.73□□□□□ -1.17
FAM49A-205ENST00000469507 GIPC2Q8TF65 315 aa7.73□□□□□ -1.17
FAM49A-205ENST00000469507 CEP126Q9P2H0 1117 aa7.73□□□□□ -1.17
FAM49A-205ENST00000469507 SALL2Q9Y467 1007 aaPredicted RBP7.73□□□□□ -1.17
FAM49A-205ENST00000469507 ANKRD33BA6NCL7 494 aa7.72□□□□□ -1.17
FAM49A-205ENST00000469507 J3QL48 77 aa7.72□□□□□ -1.17
FAM49A-205ENST00000469507 VAMP1P23763 118 aa7.72□□□□□ -1.17
FAM49A-205ENST00000469507 SLFNL1Q499Z3 407 aa7.72□□□□□ -1.17
FAM49A-205ENST00000469507 PHTF2Q8N3S3 785 aa7.72□□□□□ -1.17
FAM49A-205ENST00000469507 SNIP1Q8TAD8 396 aaKnown RBP7.72□□□□□ -1.17
FAM49A-205ENST00000469507 BIN2Q9UBW5 565 aaPredicted RBP7.72□□□□□ -1.17
FAM49A-205ENST00000469507 TERTO14746 1132 aaKnown RBP7.71□□□□□ -1.18
FAM49A-205ENST00000469507 TRIM32Q13049 653 aa7.71□□□□□ -1.18
FAM49A-205ENST00000469507 NCOA4Q13772 614 aa7.71□□□□□ -1.18
FAM49A-205ENST00000469507 MSS51Q4VC12 460 aa7.71□□□□□ -1.18
FAM49A-205ENST00000469507 NPAS4Q8IUM7 802 aa7.71□□□□□ -1.18
FAM49A-205ENST00000469507 MRGPRX2Q96LB1 330 aa7.7□□□□□ -1.18
FAM49A-205ENST00000469507 TRIM47Q96LD4 638 aa7.7□□□□□ -1.18
FAM49A-205ENST00000469507 CHIC2Q9UKJ5 165 aa7.7□□□□□ -1.18
FAM49A-205ENST00000469507 GPSM3Q9Y4H4 160 aa7.7□□□□□ -1.18
FAM49A-205ENST00000469507 F12P00748 615 aaPredicted RBP7.69□□□□□ -1.18
FAM49A-205ENST00000469507 DPYDQ12882 1025 aa7.69□□□□□ -1.18
FAM49A-205ENST00000469507 MAP7D1Q3KQU3 841 aa7.69□□□□□ -1.18
FAM49A-205ENST00000469507 PLPP7Q8NBV4 271 aa7.69□□□□□ -1.18
FAM49A-205ENST00000469507 DRC1Q96MC2 740 aa7.69□□□□□ -1.18
FAM49A-205ENST00000469507 C8orf37Q96NL8 207 aa7.69□□□□□ -1.18
FAM49A-205ENST00000469507 EGFL7Q9UHF1 273 aa7.69□□□□□ -1.18
FAM49A-205ENST00000469507 EML3Q32P44 896 aa7.68□□□□□ -1.18
FAM49A-205ENST00000469507 TRIM50Q86XT4 487 aa7.68□□□□□ -1.18
FAM49A-205ENST00000469507 RNF135Q8IUD6 432 aa7.68□□□□□ -1.18
FAM49A-205ENST00000469507 OGFOD1Q8N543 542 aa7.68□□□□□ -1.18
FAM49A-205ENST00000469507 HPS1Q92902 700 aa7.68□□□□□ -1.18
FAM49A-205ENST00000469507 CDK11BP21127 795 aaKnown RBP7.67□□□□□ -1.18
FAM49A-205ENST00000469507 ATP1A2P50993 1020 aa7.67□□□□□ -1.18
FAM49A-205ENST00000469507 MMP16P51512 607 aa7.67□□□□□ -1.18
FAM49A-205ENST00000469507 PTK2Q05397 1052 aa7.67□□□□□ -1.18
FAM49A-205ENST00000469507 TAS1R3Q7RTX0 852 aa7.67□□□□□ -1.18
FAM49A-205ENST00000469507 FAM177A1Q8N128 213 aaPredicted RBP7.67□□□□□ -1.18
FAM49A-205ENST00000469507 SENP2Q9HC62 589 aa7.67□□□□□ -1.18
FAM49A-205ENST00000469507 CDK11AQ9UQ88 783 aaPredicted RBP7.67□□□□□ -1.18
FAM49A-205ENST00000469507 PDXDC2PQ6P474 469 aa7.66□□□□□ -1.18
FAM49A-205ENST00000469507 LARGE2Q8N3Y3 721 aa7.66□□□□□ -1.18
FAM49A-205ENST00000469507 USB1Q9BQ65 265 aaKnown RBP7.66□□□□□ -1.18
FAM49A-205ENST00000469507 DNAAF2Q9NVR5 837 aaKnown RBP7.66□□□□□ -1.18
FAM49A-205ENST00000469507 ZBTB7BO15156 539 aaPredicted RBP7.65□□□□□ -1.18
FAM49A-205ENST00000469507 SCNN1AP37088 669 aa7.65□□□□□ -1.18
FAM49A-205ENST00000469507 KCNH2Q12809 1159 aa7.65□□□□□ -1.18
FAM49A-205ENST00000469507 ARMC2Q8NEN0 867 aa7.65□□□□□ -1.18
FAM49A-205ENST00000469507 GPKOWQ92917 476 aaPredicted RBP eCLIP7.65□□□□□ -1.18
FAM49A-205ENST00000469507 NOD1Q9Y239 953 aa7.65□□□□□ -1.18
FAM49A-205ENST00000469507 ICMTO60725 284 aa7.64□□□□□ -1.19
FAM49A-205ENST00000469507 CLDN10P78369 228 aa7.64□□□□□ -1.19
FAM49A-205ENST00000469507 SKOR1P84550 965 aa7.64□□□□□ -1.19
FAM49A-205ENST00000469507 PTPRNQ16849 979 aa7.64□□□□□ -1.19
FAM49A-205ENST00000469507 FBXO33Q7Z6M2 555 aa7.64□□□□□ -1.19
FAM49A-205ENST00000469507 CCDC125Q86Z20 511 aa7.64□□□□□ -1.19
FAM49A-205ENST00000469507 SREK1Q8WXA9 508 aaKnown RBP7.64□□□□□ -1.19
FAM49A-205ENST00000469507 PCDHB9Q9Y5E1 797 aa7.64□□□□□ -1.19
FAM49A-205ENST00000469507 DXOO77932 396 aaKnown RBP7.63□□□□□ -1.19
FAM49A-205ENST00000469507 DKK1O94907 266 aa7.63□□□□□ -1.19
FAM49A-205ENST00000469507 ABL1P00519 1130 aa7.63□□□□□ -1.19
FAM49A-205ENST00000469507 COL19A1Q14993 1142 aa7.63□□□□□ -1.19
FAM49A-205ENST00000469507 BCL11AQ9H165 835 aa7.63□□□□□ -1.19
FAM49A-205ENST00000469507 CXXC1Q9P0U4 656 aaPredicted RBP7.63□□□□□ -1.19
FAM49A-205ENST00000469507 MAP10Q9P2G4 905 aa7.63□□□□□ -1.19
FAM49A-205ENST00000469507 CANXP27824 592 aaKnown RBP7.62□□□□□ -1.19
FAM49A-205ENST00000469507 CTHP32929 405 aa7.62□□□□□ -1.19
FAM49A-205ENST00000469507 SEC13P55735 322 aa7.62□□□□□ -1.19
FAM49A-205ENST00000469507 ZC3H6P61129 1189 aaKnown RBP7.62□□□□□ -1.19
FAM49A-205ENST00000469507 RC3H1Q5TC82 1133 aaKnown RBP7.62□□□□□ -1.19
FAM49A-205ENST00000469507 SIX5Q8N196 739 aa7.62□□□□□ -1.19
FAM49A-205ENST00000469507 KIFC2Q96AC6 838 aa7.62□□□□□ -1.19
FAM49A-205ENST00000469507 ZNF594Q96JF6 807 aaPredicted RBP7.62□□□□□ -1.19
FAM49A-205ENST00000469507 ASB16Q96NS5 453 aa7.62□□□□□ -1.19
FAM49A-205ENST00000469507 PRMT3O60678 531 aa7.61□□□□□ -1.19
FAM49A-205ENST00000469507 JUNDP17535 347 aa7.61□□□□□ -1.19
FAM49A-205ENST00000469507 OCLNQ16625 522 aa7.61□□□□□ -1.19
FAM49A-205ENST00000469507 TSGA10IPQ3SY00 556 aa7.61□□□□□ -1.19
FAM49A-205ENST00000469507 ZSCAN29Q8IWY8 852 aaPredicted RBP7.61□□□□□ -1.19
FAM49A-205ENST00000469507 CCDC24Q8N4L8 307 aa7.61□□□□□ -1.19
FAM49A-205ENST00000469507 OCSTAMPQ9BR26 566 aa7.61□□□□□ -1.19
FAM49A-205ENST00000469507 RBM19Q9Y4C8 960 aaKnown RBP7.61□□□□□ -1.19
FAM49A-205ENST00000469507 MAPK1P28482 360 aa7.6□□□□□ -1.19
FAM49A-205ENST00000469507 GLYCTKQ8IVS8 523 aa7.6□□□□□ -1.19
FAM49A-205ENST00000469507 PRIMPOLQ96LW4 560 aa7.6□□□□□ -1.19
FAM49A-205ENST00000469507 EVA1BQ9NVM1 165 aa7.6□□□□□ -1.19
FAM49A-205ENST00000469507 DCTN4Q9UJW0 460 aa7.6□□□□□ -1.19
FAM49A-205ENST00000469507 H3BRB1 525 aa7.59□□□□□ -1.19
FAM49A-205ENST00000469507 C21orf2O43822 256 aa7.59□□□□□ -1.19
FAM49A-205ENST00000469507 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
FAM49A-205ENST00000469507 TAGLNQ01995 201 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms