RNA–Protein interactions for RNA: ENST00000469507.1

FAM49A-205, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 2

Gene FAM49A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-205ENST00000469507 AEBP2Q6ZN18 517 aaPredicted RBP21.95■■□□□ 1.1
FAM49A-205ENST00000469507 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
FAM49A-205ENST00000469507 SENP3Q9H4L4 574 aaPredicted RBP18.69■□□□□ 0.58
FAM49A-205ENST00000469507 PHF23Q9BUL5 403 aaPredicted RBP18.45■□□□□ 0.54
FAM49A-205ENST00000469507 FOXD1Q16676 465 aa17.5■□□□□ 0.39
FAM49A-205ENST00000469507 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
FAM49A-205ENST00000469507 MSH5O43196 834 aa16.41■□□□□ 0.22
FAM49A-205ENST00000469507 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
FAM49A-205ENST00000469507 PIAS4Q8N2W9 510 aaPredicted RBP16.27■□□□□ 0.2
FAM49A-205ENST00000469507 PPP6R1Q9UPN7 881 aa16.2■□□□□ 0.18
FAM49A-205ENST00000469507 ADRA2BP18089 450 aa16.12■□□□□ 0.17
FAM49A-205ENST00000469507 MAPK8IP2Q13387 824 aaPredicted RBP14.9□□□□□ -0.02
FAM49A-205ENST00000469507 DMRT2Q9Y5R5 561 aa14.8□□□□□ -0.04
FAM49A-205ENST00000469507 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
FAM49A-205ENST00000469507 PPP4R3CPQ6ZMV5 832 aa14.28□□□□□ -0.12
FAM49A-205ENST00000469507 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
FAM49A-205ENST00000469507 DCAF8L1A6NGE4 600 aa14.22□□□□□ -0.13
FAM49A-205ENST00000469507 HOXD11P31277 338 aaPredicted RBP14.15□□□□□ -0.14
FAM49A-205ENST00000469507 CNKSR2Q8WXI2 1034 aa14.04□□□□□ -0.16
FAM49A-205ENST00000469507 RNF39Q9H2S5 420 aa14.01□□□□□ -0.17
FAM49A-205ENST00000469507 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
FAM49A-205ENST00000469507 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
FAM49A-205ENST00000469507 DNAJC5BQ9UF47 199 aa13.66□□□□□ -0.22
FAM49A-205ENST00000469507 NCBP3Q53F19 620 aaKnown RBP13.6□□□□□ -0.23
FAM49A-205ENST00000469507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.48□□□□□ -0.25
FAM49A-205ENST00000469507 NPM3O75607 178 aaKnown RBP13.46□□□□□ -0.25
FAM49A-205ENST00000469507 U3KPZ7 1027 aaPredicted RBP13.2□□□□□ -0.3
FAM49A-205ENST00000469507 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
FAM49A-205ENST00000469507 CAPN15O75808 1086 aa13.05□□□□□ -0.32
FAM49A-205ENST00000469507 DSG3P32926 999 aa13.05□□□□□ -0.32
FAM49A-205ENST00000469507 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
FAM49A-205ENST00000469507 KCNA4P22459 653 aa13.01□□□□□ -0.33
FAM49A-205ENST00000469507 SLC4A2P04920 1241 aa12.94□□□□□ -0.34
FAM49A-205ENST00000469507 POTEHQ6S545 545 aa12.86□□□□□ -0.35
FAM49A-205ENST00000469507 TRHP20396 242 aaPredicted RBP12.8□□□□□ -0.36
FAM49A-205ENST00000469507 ABCB7O75027 752 aa12.76□□□□□ -0.37
FAM49A-205ENST00000469507 ZNF219Q9P2Y4 722 aaPredicted RBP12.72□□□□□ -0.37
FAM49A-205ENST00000469507 APLP2Q06481 763 aa12.71□□□□□ -0.37
FAM49A-205ENST00000469507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
FAM49A-205ENST00000469507 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
FAM49A-205ENST00000469507 SAMD1Q6SPF0 538 aaPredicted RBP12.6□□□□□ -0.39
FAM49A-205ENST00000469507 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
FAM49A-205ENST00000469507 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.41
FAM49A-205ENST00000469507 MYCNP04198 464 aaPredicted RBP12.42□□□□□ -0.42
FAM49A-205ENST00000469507 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
FAM49A-205ENST00000469507 POLA2Q14181 598 aa12.39□□□□□ -0.43
FAM49A-205ENST00000469507 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
FAM49A-205ENST00000469507 ATF5Q9Y2D1 282 aaPredicted RBP12.22□□□□□ -0.45
FAM49A-205ENST00000469507 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
FAM49A-205ENST00000469507 AKT1S1Q96B36 256 aa12.09□□□□□ -0.47
FAM49A-205ENST00000469507 ZBTB12Q9Y330 459 aaPredicted RBP12.06□□□□□ -0.48
FAM49A-205ENST00000469507 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
FAM49A-205ENST00000469507 REM2Q8IYK8 340 aaPredicted RBP12.01□□□□□ -0.49
FAM49A-205ENST00000469507 ZBTB22O15209 634 aa11.97□□□□□ -0.49
FAM49A-205ENST00000469507 PIP4P2Q8N4L2 257 aa11.94□□□□□ -0.5
FAM49A-205ENST00000469507 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
FAM49A-205ENST00000469507 SP7Q8TDD2 431 aaPredicted RBP11.93□□□□□ -0.5
FAM49A-205ENST00000469507 PITPNM1O00562 1244 aa11.89□□□□□ -0.51
FAM49A-205ENST00000469507 FXR2P51116 673 aaKnown RBP eCLIP11.82□□□□□ -0.52
FAM49A-205ENST00000469507 ATXN8OSP0DMR3 200 aa11.79□□□□□ -0.52
FAM49A-205ENST00000469507 HAX1O00165 279 aa11.78□□□□□ -0.52
FAM49A-205ENST00000469507 AMER1Q5JTC6 1135 aaPredicted RBP11.76□□□□□ -0.53
FAM49A-205ENST00000469507 RTN4Q9NQC3 1192 aaKnown RBP11.73□□□□□ -0.53
FAM49A-205ENST00000469507 SPDYE2BA6NHP3 402 aa11.7□□□□□ -0.54
FAM49A-205ENST00000469507 SPDYE6P0CI01 402 aa11.7□□□□□ -0.54
FAM49A-205ENST00000469507 SPDYE2Q495Y8 402 aa11.7□□□□□ -0.54
FAM49A-205ENST00000469507 FBLN2P98095 1184 aa11.69□□□□□ -0.54
FAM49A-205ENST00000469507 EVX2Q03828 476 aa11.67□□□□□ -0.54
FAM49A-205ENST00000469507 MKRN4PQ13434 485 aaPredicted RBP11.64□□□□□ -0.55
FAM49A-205ENST00000469507 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
FAM49A-205ENST00000469507 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
FAM49A-205ENST00000469507 SPDYE1Q8NFV5 336 aaPredicted RBP11.56□□□□□ -0.56
FAM49A-205ENST00000469507 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
FAM49A-205ENST00000469507 SSUH2Q9Y2M2 353 aa11.54□□□□□ -0.56
FAM49A-205ENST00000469507 C19orf67A6NJJ6 358 aa11.45□□□□□ -0.58
FAM49A-205ENST00000469507 CHADLQ6NUI6 762 aa11.41□□□□□ -0.58
FAM49A-205ENST00000469507 PABPN1Q86U42 306 aaKnown RBP eCLIP11.38□□□□□ -0.59
FAM49A-205ENST00000469507 GABBR2O75899 941 aa11.35□□□□□ -0.59
FAM49A-205ENST00000469507 PRR29P0C7W0 189 aa11.33□□□□□ -0.6
FAM49A-205ENST00000469507 FKBP8Q14318 412 aa11.3□□□□□ -0.6
FAM49A-205ENST00000469507 LHX8Q68G74 356 aa11.2□□□□□ -0.62
FAM49A-205ENST00000469507 FARP1Q9Y4F1 1045 aaPredicted RBP11.19□□□□□ -0.62
FAM49A-205ENST00000469507 CD44P16070 742 aaKnown RBP11.18□□□□□ -0.62
FAM49A-205ENST00000469507 POTEIP0CG38 1075 aa11.14□□□□□ -0.63
FAM49A-205ENST00000469507 CREBZFQ9NS37 354 aa11.03□□□□□ -0.64
FAM49A-205ENST00000469507 CLCN6P51797 869 aa10.99□□□□□ -0.65
FAM49A-205ENST00000469507 ZNF579Q8NAF0 562 aaKnown RBP10.99□□□□□ -0.65
FAM49A-205ENST00000469507 ZRANB1Q9UGI0 708 aa10.99□□□□□ -0.65
FAM49A-205ENST00000469507 DCBLD2Q96PD2 775 aa10.97□□□□□ -0.65
FAM49A-205ENST00000469507 STAG3Q9UJ98 1225 aa10.96□□□□□ -0.65
FAM49A-205ENST00000469507 SPDYE4A6NLX3 237 aa10.93□□□□□ -0.66
FAM49A-205ENST00000469507 GALR2O43603 387 aaPredicted RBP10.91□□□□□ -0.66
FAM49A-205ENST00000469507 PHF12Q96QT6 1004 aa10.84□□□□□ -0.67
FAM49A-205ENST00000469507 MNX1P50219 401 aaPredicted RBP10.81□□□□□ -0.68
FAM49A-205ENST00000469507 PLCB2Q00722 1185 aa10.81□□□□□ -0.68
FAM49A-205ENST00000469507 PAK3O75914 559 aaPredicted RBP10.8□□□□□ -0.68
FAM49A-205ENST00000469507 POTEB2H3BUK9 544 aa10.77□□□□□ -0.69
FAM49A-205ENST00000469507 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
FAM49A-205ENST00000469507 OTUD5Q96G74 571 aa10.76□□□□□ -0.69
FAM49A-205ENST00000469507 PELP1Q8IZL8 1130 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms