RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 NR6A1Q15406 480 aa10.01□□□□□ -0.81
VPS8-219ENST00000469479 PODNQ7Z5L7 613 aa10.01□□□□□ -0.81
VPS8-219ENST00000469479 PNMA1Q8ND90 353 aa10.01□□□□□ -0.81
VPS8-219ENST00000469479 ADAM32Q8TC27 787 aa10.01□□□□□ -0.81
VPS8-219ENST00000469479 GMCL1Q96IK5 515 aa10.01□□□□□ -0.81
VPS8-219ENST00000469479 EIF4G1Q04637 1599 aaKnown RBP10.01□□□□□ -0.81
VPS8-219ENST00000469479 PTGIRP43119 386 aa10□□□□□ -0.81
VPS8-219ENST00000469479 LYSMD3Q7Z3D4 306 aa10□□□□□ -0.81
VPS8-219ENST00000469479 ZNF784Q8NCA9 323 aaPredicted RBP9.99□□□□□ -0.81
VPS8-219ENST00000469479 OCSTAMPQ9BR26 566 aa9.99□□□□□ -0.81
VPS8-219ENST00000469479 TMPRSS4Q9NRS4 437 aa9.99□□□□□ -0.81
VPS8-219ENST00000469479 KRTAP9-6A0A140TA67 174 aa9.98□□□□□ -0.81
VPS8-219ENST00000469479 FOXD4L5Q5VV16 416 aaPredicted RBP9.98□□□□□ -0.81
VPS8-219ENST00000469479 LILRA1O75019 489 aa9.97□□□□□ -0.81
VPS8-219ENST00000469479 GAS6Q14393 721 aa9.97□□□□□ -0.81
VPS8-219ENST00000469479 FOXR1Q6PIV2 292 aa9.97□□□□□ -0.81
VPS8-219ENST00000469479 ERVH48-1M5A8F1 160 aa9.96□□□□□ -0.82
VPS8-219ENST00000469479 ADD1P35611 737 aaKnown RBP9.96□□□□□ -0.82
VPS8-219ENST00000469479 SKIV2LQ15477 1246 aaKnown RBP9.96□□□□□ -0.82
VPS8-219ENST00000469479 PPP2R2DQ66LE6 453 aa9.96□□□□□ -0.82
VPS8-219ENST00000469479 NEDD1Q8NHV4 660 aa9.96□□□□□ -0.82
VPS8-219ENST00000469479 RNF144AP50876 292 aaPredicted RBP9.95□□□□□ -0.82
VPS8-219ENST00000469479 RAB15P59190 212 aa9.95□□□□□ -0.82
VPS8-219ENST00000469479 DZIP3Q86Y13 1208 aaKnown RBP9.95□□□□□ -0.82
VPS8-219ENST00000469479 MBIPQ9NS73 344 aa9.95□□□□□ -0.82
VPS8-219ENST00000469479 CUEDC1Q9NWM3 386 aaPredicted RBP9.95□□□□□ -0.82
VPS8-219ENST00000469479 SEPT12Q8IYM1 358 aa9.94□□□□□ -0.82
VPS8-219ENST00000469479 KDF1Q8NAX2 398 aaPredicted RBP9.94□□□□□ -0.82
VPS8-219ENST00000469479 SLC24A3Q9HC58 644 aa9.94□□□□□ -0.82
VPS8-219ENST00000469479 ESPNB1AK53 854 aa9.93□□□□□ -0.82
VPS8-219ENST00000469479 TRIM22Q8IYM9 498 aa9.93□□□□□ -0.82
VPS8-219ENST00000469479 CUX2O14529 1486 aa9.92□□□□□ -0.82
VPS8-219ENST00000469479 BAG6P46379 1132 aa9.92□□□□□ -0.82
VPS8-219ENST00000469479 PRICKLE2Q7Z3G6 844 aa9.92□□□□□ -0.82
VPS8-219ENST00000469479 ZNF837Q96EG3 531 aaPredicted RBP9.92□□□□□ -0.82
VPS8-219ENST00000469479 DCAF1Q9Y4B6 1507 aa9.92□□□□□ -0.82
VPS8-219ENST00000469479 AP1G2O75843 785 aa9.9□□□□□ -0.82
VPS8-219ENST00000469479 BCRP11274 1271 aa9.9□□□□□ -0.82
VPS8-219ENST00000469479 GPC1P35052 558 aa9.9□□□□□ -0.82
VPS8-219ENST00000469479 SH3D19Q5HYK7 790 aa9.9□□□□□ -0.82
VPS8-219ENST00000469479 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.9□□□□□ -0.82
VPS8-219ENST00000469479 LRRC4BQ9NT99 713 aa9.9□□□□□ -0.82
VPS8-219ENST00000469479 ATP1B4Q9UN42 357 aaPredicted RBP9.9□□□□□ -0.82
VPS8-219ENST00000469479 IGF1RP08069 1367 aa9.89□□□□□ -0.83
VPS8-219ENST00000469479 H7C1W4 665 aa9.89□□□□□ -0.83
VPS8-219ENST00000469479 KRTAP1-3Q8IUG1 177 aa9.89□□□□□ -0.83
VPS8-219ENST00000469479 FURINP09958 794 aa9.88□□□□□ -0.83
VPS8-219ENST00000469479 RHOQP17081 205 aa9.88□□□□□ -0.83
VPS8-219ENST00000469479 RIPOR1Q6ZS17 1223 aa9.88□□□□□ -0.83
VPS8-219ENST00000469479 CCDC125Q86Z20 511 aa9.88□□□□□ -0.83
VPS8-219ENST00000469479 DYRK1BQ9Y463 629 aa9.88□□□□□ -0.83
VPS8-219ENST00000469479 DBN1Q16643 649 aa9.87□□□□□ -0.83
VPS8-219ENST00000469479 PROCA1Q8NCQ7 364 aaPredicted RBP9.87□□□□□ -0.83
VPS8-219ENST00000469479 TRERF1Q96PN7 1200 aa9.87□□□□□ -0.83
VPS8-219ENST00000469479 CYLDQ9NQC7 956 aa9.87□□□□□ -0.83
VPS8-219ENST00000469479 NSFL1CQ9UNZ2 370 aaKnown RBP9.87□□□□□ -0.83
VPS8-219ENST00000469479 ATP5J2-PTCD1G3V325 749 aa9.86□□□□□ -0.83
VPS8-219ENST00000469479 FBXO31Q5XUX0 539 aaPredicted RBP9.86□□□□□ -0.83
VPS8-219ENST00000469479 EPS8L1Q8TE68 723 aa9.86□□□□□ -0.83
VPS8-219ENST00000469479 GPR25O00155 361 aa9.85□□□□□ -0.83
VPS8-219ENST00000469479 MEN1O00255 615 aa9.84□□□□□ -0.83
VPS8-219ENST00000469479 GTPBP3Q969Y2 492 aaKnown RBP9.84□□□□□ -0.83
VPS8-219ENST00000469479 ACDQ96AP0 544 aa9.84□□□□□ -0.83
VPS8-219ENST00000469479 DDRGK1Q96HY6 314 aa9.84□□□□□ -0.83
VPS8-219ENST00000469479 USP17L8P0C7I0 530 aa9.83□□□□□ -0.84
VPS8-219ENST00000469479 SCRIBQ14160 1630 aa9.82□□□□□ -0.84
VPS8-219ENST00000469479 A0A1W2PRU2 124 aa9.82□□□□□ -0.84
VPS8-219ENST00000469479 MX2P20592 715 aa9.82□□□□□ -0.84
VPS8-219ENST00000469479 WDR44Q5JSH3 913 aa9.82□□□□□ -0.84
VPS8-219ENST00000469479 NLRP3Q96P20 1036 aa9.82□□□□□ -0.84
VPS8-219ENST00000469479 GAS2L1Q99501 681 aaPredicted RBP9.82□□□□□ -0.84
VPS8-219ENST00000469479 HMX1Q9NP08 348 aaPredicted RBP9.82□□□□□ -0.84
VPS8-219ENST00000469479 KRBA1A5PL33 1030 aa9.81□□□□□ -0.84
VPS8-219ENST00000469479 SLC27A3Q5K4L6 730 aa9.81□□□□□ -0.84
VPS8-219ENST00000469479 ZCCHC6Q5VYS8 1495 aaKnown RBP9.8□□□□□ -0.84
VPS8-219ENST00000469479 POU4F2Q12837 409 aa9.8□□□□□ -0.84
VPS8-219ENST00000469479 OIP5O43482 229 aa9.79□□□□□ -0.84
VPS8-219ENST00000469479 ALYREFQ86V81 257 aaKnown RBP9.79□□□□□ -0.84
VPS8-219ENST00000469479 GIGYF1O75420 1035 aaPredicted RBP9.78□□□□□ -0.84
VPS8-219ENST00000469479 RNF20Q5VTR2 975 aa9.78□□□□□ -0.84
VPS8-219ENST00000469479 CC2D2BQ6DHV5 1058 aa9.78□□□□□ -0.84
VPS8-219ENST00000469479 NBPF10Q6P3W6 841 aaKnown RBP9.78□□□□□ -0.84
VPS8-219ENST00000469479 NBPF15Q8N660 670 aa9.78□□□□□ -0.84
VPS8-219ENST00000469479 GRIP2Q9C0E4 1043 aa9.78□□□□□ -0.84
VPS8-219ENST00000469479 ZBBXA8MT70 800 aa9.77□□□□□ -0.85
VPS8-219ENST00000469479 SPATA31C2B4DYI2 1134 aa9.77□□□□□ -0.85
VPS8-219ENST00000469479 MAP2K3P46734 347 aa9.77□□□□□ -0.85
VPS8-219ENST00000469479 ERVK-9P63128 1117 aa9.77□□□□□ -0.85
VPS8-219ENST00000469479 CLN3Q13286 438 aa9.77□□□□□ -0.85
VPS8-219ENST00000469479 CYP2U1Q7Z449 544 aa9.77□□□□□ -0.85
VPS8-219ENST00000469479 PCDHB9Q9Y5E1 797 aa9.77□□□□□ -0.85
VPS8-219ENST00000469479 F11P03951 625 aa9.76□□□□□ -0.85
VPS8-219ENST00000469479 OXCT2Q9BYC2 517 aaPredicted RBP9.76□□□□□ -0.85
VPS8-219ENST00000469479 FAM117AQ9C073 453 aa9.76□□□□□ -0.85
VPS8-219ENST00000469479 NUCKS1Q9H1E3 243 aaKnown RBP9.76□□□□□ -0.85
VPS8-219ENST00000469479 KDM4CQ9H3R0 1056 aa9.76□□□□□ -0.85
VPS8-219ENST00000469479 ERCC6Q03468 1493 aa9.76□□□□□ -0.85
VPS8-219ENST00000469479 MCCD1P59942 119 aaPredicted RBP9.75□□□□□ -0.85
VPS8-219ENST00000469479 TAS1R3Q7RTX0 852 aa9.75□□□□□ -0.85
VPS8-219ENST00000469479 CFHR5Q9BXR6 569 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms