RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 HECW1Q76N89 1606 aa12.58□□□□□ -0.4
TRAPPC10-207ENST00000468864 PPFIA3O75145 1194 aa12.58□□□□□ -0.4
TRAPPC10-207ENST00000468864 SDSP20132 328 aa12.58□□□□□ -0.4
TRAPPC10-207ENST00000468864 MX1P20591 662 aa12.58□□□□□ -0.4
TRAPPC10-207ENST00000468864 TRIM29Q14134 588 aa12.58□□□□□ -0.4
TRAPPC10-207ENST00000468864 NOLC1Q14978 699 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRAPPC10-207ENST00000468864 RBSNQ9H1K0 784 aa12.58□□□□□ -0.4
TRAPPC10-207ENST00000468864 BRPF1P55201 1214 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC10-207ENST00000468864 WASHC4Q2M389 1173 aa12.57□□□□□ -0.4
TRAPPC10-207ENST00000468864 TSC1Q92574 1164 aa12.57□□□□□ -0.4
TRAPPC10-207ENST00000468864 ARHGAP5Q13017 1502 aa12.57□□□□□ -0.4
TRAPPC10-207ENST00000468864 CCT4P50991 539 aaKnown RBP12.57□□□□□ -0.4
TRAPPC10-207ENST00000468864 NLRP6P59044 892 aa12.57□□□□□ -0.4
TRAPPC10-207ENST00000468864 STK38Q15208 465 aa12.57□□□□□ -0.4
TRAPPC10-207ENST00000468864 BLOC1S2Q6QNY1 142 aa12.57□□□□□ -0.4
TRAPPC10-207ENST00000468864 TXNDC2Q86VQ3 553 aa12.57□□□□□ -0.4
TRAPPC10-207ENST00000468864 SPG7Q9UQ90 795 aa12.57□□□□□ -0.4
TRAPPC10-207ENST00000468864 RIC3Q7Z5B4 369 aa12.57□□□□□ -0.4
TRAPPC10-207ENST00000468864 SMC5Q8IY18 1101 aa12.57□□□□□ -0.4
TRAPPC10-207ENST00000468864 EMILIN1Q9Y6C2 1016 aa12.57□□□□□ -0.4
TRAPPC10-207ENST00000468864 PRPF40BQ6NWY9 871 aaKnown RBP12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 PCMTD1Q96MG8 357 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 PTPN14Q15678 1187 aa12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 NFXL1Q6ZNB6 911 aa12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 GAS2L3Q86XJ1 694 aa12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 PATL2C9JE40 543 aaKnown RBP12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 SERPINC1P01008 464 aa12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 TRDNQ13061 729 aa12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 ALDH1L2Q3SY69 923 aa12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 C17orf53Q8N3J3 647 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 SNX21Q969T3 373 aa12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 V9GYY5 206 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 POLR3GO15318 223 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 AEBP1Q8IUX7 1158 aa12.56□□□□□ -0.4
TRAPPC10-207ENST00000468864 AKAP17AQ02040 695 aaKnown RBP12.55□□□□□ -0.4
TRAPPC10-207ENST00000468864 RALYLQ86SE5 291 aaKnown RBP12.55□□□□□ -0.4
TRAPPC10-207ENST00000468864 ZBTB9Q96C00 473 aa12.55□□□□□ -0.4
TRAPPC10-207ENST00000468864 MCM5P33992 734 aa12.55□□□□□ -0.4
TRAPPC10-207ENST00000468864 SRCIN1Q9C0H9 1055 aa12.55□□□□□ -0.4
TRAPPC10-207ENST00000468864 IPO7O95373 1038 aaKnown RBP12.55□□□□□ -0.4
TRAPPC10-207ENST00000468864 TTC22Q5TAA0 569 aa12.55□□□□□ -0.4
TRAPPC10-207ENST00000468864 CLSTN1O94985 981 aa12.54□□□□□ -0.4
TRAPPC10-207ENST00000468864 DDX58O95786 925 aaKnown RBP12.54□□□□□ -0.4
TRAPPC10-207ENST00000468864 UBXN4Q92575 508 aa12.54□□□□□ -0.4
TRAPPC10-207ENST00000468864 CARD14Q9BXL6 1004 aa12.54□□□□□ -0.4
TRAPPC10-207ENST00000468864 CAMSAP2Q08AD1 1489 aa12.54□□□□□ -0.4
TRAPPC10-207ENST00000468864 OLFM4Q6UX06 510 aa12.54□□□□□ -0.4
TRAPPC10-207ENST00000468864 CHAMP1Q96JM3 812 aa12.54□□□□□ -0.4
TRAPPC10-207ENST00000468864 GUCY1B3Q02153 619 aa12.53□□□□□ -0.4
TRAPPC10-207ENST00000468864 USP48Q86UV5 1035 aa12.53□□□□□ -0.4
TRAPPC10-207ENST00000468864 AACSQ86V21 672 aa12.53□□□□□ -0.4
TRAPPC10-207ENST00000468864 TCEANC2Q96MN5 208 aa12.53□□□□□ -0.4
TRAPPC10-207ENST00000468864 MEIS3Q99687 375 aa12.53□□□□□ -0.4
TRAPPC10-207ENST00000468864 CLIP2Q9UDT6 1046 aa12.53□□□□□ -0.4
TRAPPC10-207ENST00000468864 CNPY2Q9Y2B0 182 aa12.53□□□□□ -0.4
TRAPPC10-207ENST00000468864 SHROOM2Q13796 1616 aa12.53□□□□□ -0.4
TRAPPC10-207ENST00000468864 DENND4BO75064 1496 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC10-207ENST00000468864 STX6O43752 255 aa12.52□□□□□ -0.4
TRAPPC10-207ENST00000468864 RAB11FIP3O75154 756 aa12.52□□□□□ -0.4
TRAPPC10-207ENST00000468864 EID1Q9Y6B2 187 aa12.52□□□□□ -0.4
TRAPPC10-207ENST00000468864 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.52□□□□□ -0.4
TRAPPC10-207ENST00000468864 PLB1Q6P1J6 1458 aa12.52□□□□□ -0.41
TRAPPC10-207ENST00000468864 CCDC186Q7Z3E2 898 aa12.52□□□□□ -0.41
TRAPPC10-207ENST00000468864 WAPLQ7Z5K2 1190 aa12.52□□□□□ -0.41
TRAPPC10-207ENST00000468864 TSPYL6Q8N831 410 aa12.52□□□□□ -0.41
TRAPPC10-207ENST00000468864 CHMP4CQ96CF2 233 aa12.52□□□□□ -0.41
TRAPPC10-207ENST00000468864 ZBTB40Q9NUA8 1239 aa12.52□□□□□ -0.41
TRAPPC10-207ENST00000468864 CEP57L1Q8IYX8 460 aa12.52□□□□□ -0.41
TRAPPC10-207ENST00000468864 TMX1Q9H3N1 280 aa12.52□□□□□ -0.41
TRAPPC10-207ENST00000468864 MBIPQ9NS73 344 aa12.52□□□□□ -0.41
TRAPPC10-207ENST00000468864 LIMCH1Q9UPQ0 1083 aa12.52□□□□□ -0.41
TRAPPC10-207ENST00000468864 KIAA0556O60303 1618 aa12.51□□□□□ -0.41
TRAPPC10-207ENST00000468864 GTF2F1P35269 517 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRAPPC10-207ENST00000468864 ZNF165P49910 485 aa12.51□□□□□ -0.41
TRAPPC10-207ENST00000468864 SETQ01105 290 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC10-207ENST00000468864 NECAB1Q8N987 351 aa12.51□□□□□ -0.41
TRAPPC10-207ENST00000468864 PRIMPOLQ96LW4 560 aa12.51□□□□□ -0.41
TRAPPC10-207ENST00000468864 URI1O94763 535 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC10-207ENST00000468864 NME9Q86XW9 330 aa12.51□□□□□ -0.41
TRAPPC10-207ENST00000468864 KIF18AQ8NI77 898 aa12.51□□□□□ -0.41
TRAPPC10-207ENST00000468864 ZFP91Q96JP5 570 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC10-207ENST00000468864 LRRFIP2Q9Y608 721 aaKnown RBP12.51□□□□□ -0.41
TRAPPC10-207ENST00000468864 CWC15Q9P013 229 aaKnown RBP12.51□□□□□ -0.41
TRAPPC10-207ENST00000468864 PPP6R1Q9UPN7 881 aa12.51□□□□□ -0.41
TRAPPC10-207ENST00000468864 TTC5Q8N0Z6 440 aa12.5□□□□□ -0.41
TRAPPC10-207ENST00000468864 OTUD7AQ8TE49 926 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC10-207ENST00000468864 MAGI1Q96QZ7 1491 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC10-207ENST00000468864 NOM1Q5C9Z4 860 aaKnown RBP12.5□□□□□ -0.41
TRAPPC10-207ENST00000468864 BOLA2Q9H3K6 86 aa12.5□□□□□ -0.41
TRAPPC10-207ENST00000468864 GJB2P29033 226 aa12.5□□□□□ -0.41
TRAPPC10-207ENST00000468864 KRT24Q2M2I5 525 aa12.5□□□□□ -0.41
TRAPPC10-207ENST00000468864 CCDC70Q6NSX1 233 aa12.5□□□□□ -0.41
TRAPPC10-207ENST00000468864 LEKR1Q6ZMV7 388 aa12.5□□□□□ -0.41
TRAPPC10-207ENST00000468864 BBXQ8WY36 941 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC10-207ENST00000468864 IQGAP2Q13576 1575 aa12.49□□□□□ -0.41
TRAPPC10-207ENST00000468864 C8orf58Q8NAV2 365 aa12.49□□□□□ -0.41
TRAPPC10-207ENST00000468864 ZSCAN31Q96LW9 406 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC10-207ENST00000468864 ZNF396Q96N95 335 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC10-207ENST00000468864 HOOK1Q9UJC3 728 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms