RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ONECUT3O60422 494 aaPredicted RBP20.22■□□□□ 0.83
SNIP1-202ENST00000468040 ADAMTS8Q9UP79 889 aa20.22■□□□□ 0.83
SNIP1-202ENST00000468040 THSD7AQ9UPZ6 1657 aa20.22■□□□□ 0.83
SNIP1-202ENST00000468040 PRKAR2BP31323 418 aa20.21■□□□□ 0.83
SNIP1-202ENST00000468040 A0A0G2JS52 829 aa20.2■□□□□ 0.82
SNIP1-202ENST00000468040 NEFMP07197 916 aa20.2■□□□□ 0.82
SNIP1-202ENST00000468040 MYT1Q01538 1121 aa20.2■□□□□ 0.82
SNIP1-202ENST00000468040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.19■□□□□ 0.82
SNIP1-202ENST00000468040 LRRC37A3O60309 1634 aa20.18■□□□□ 0.82
SNIP1-202ENST00000468040 AMOTQ4VCS5 1084 aa20.18■□□□□ 0.82
SNIP1-202ENST00000468040 SPG7Q9UQ90 795 aa20.18■□□□□ 0.82
SNIP1-202ENST00000468040 TNS2Q63HR2 1409 aa20.18■□□□□ 0.82
SNIP1-202ENST00000468040 PKD1L3Q7Z443 1732 aa20.17■□□□□ 0.82
SNIP1-202ENST00000468040 EXOC5O00471 708 aa20.17■□□□□ 0.82
SNIP1-202ENST00000468040 DDB1Q16531 1140 aa20.17■□□□□ 0.82
SNIP1-202ENST00000468040 PLEKHO1Q53GL0 409 aaPredicted RBP20.17■□□□□ 0.82
SNIP1-202ENST00000468040 SEPT12Q8IYM1 358 aa20.17■□□□□ 0.82
SNIP1-202ENST00000468040 FAM9BQ8IZU0 186 aa20.17■□□□□ 0.82
SNIP1-202ENST00000468040 MAPK8IP3Q9UPT6 1336 aa20.17■□□□□ 0.82
SNIP1-202ENST00000468040 ZCRB1Q8TBF4 217 aaKnown RBP20.16■□□□□ 0.82
SNIP1-202ENST00000468040 PLEKHF1Q96S99 279 aa20.16■□□□□ 0.82
SNIP1-202ENST00000468040 RUNDC1Q96C34 613 aa20.15■□□□□ 0.82
SNIP1-202ENST00000468040 RGS12O14924 1447 aa20.14■□□□□ 0.81
SNIP1-202ENST00000468040 PCDH11XQ9BZA7 1347 aa20.14■□□□□ 0.81
SNIP1-202ENST00000468040 PCDH11YQ9BZA8 1340 aa20.14■□□□□ 0.81
SNIP1-202ENST00000468040 CCDC146Q8IYE0 955 aa20.13■□□□□ 0.81
SNIP1-202ENST00000468040 GAS2L2Q8NHY3 880 aa20.13■□□□□ 0.81
SNIP1-202ENST00000468040 PHACTR3Q96KR7 559 aa20.13■□□□□ 0.81
SNIP1-202ENST00000468040 PDE3BQ13370 1112 aa20.12■□□□□ 0.81
SNIP1-202ENST00000468040 SHANK3Q9BYB0 1731 aa20.12■□□□□ 0.81
SNIP1-202ENST00000468040 MTHFSDQ2M296 383 aaKnown RBP20.11■□□□□ 0.81
SNIP1-202ENST00000468040 C1orf141Q5JVX7 400 aa20.1■□□□□ 0.81
SNIP1-202ENST00000468040 ZNF530Q6P9A1 599 aaPredicted RBP20.1■□□□□ 0.81
SNIP1-202ENST00000468040 DDX54Q8TDD1 881 aaKnown RBP20.1■□□□□ 0.81
SNIP1-202ENST00000468040 IFNL2Q8IZJ0 200 aa20.09■□□□□ 0.81
SNIP1-202ENST00000468040 CYP27B1O15528 508 aa20.08■□□□□ 0.81
SNIP1-202ENST00000468040 AKAP4Q5JQC9 854 aa20.08■□□□□ 0.81
SNIP1-202ENST00000468040 KRT27Q7Z3Y8 459 aa20.08■□□□□ 0.81
SNIP1-202ENST00000468040 BRWD3Q6RI45 1802 aa20.08■□□□□ 0.8
SNIP1-202ENST00000468040 HSP90AB1P08238 724 aaKnown RBP20.07■□□□□ 0.8
SNIP1-202ENST00000468040 PHKG2P15735 406 aa20.07■□□□□ 0.8
SNIP1-202ENST00000468040 NFE2L2Q16236 605 aa20.07■□□□□ 0.8
SNIP1-202ENST00000468040 MARCH10Q8NA82 808 aaPredicted RBP20.06■□□□□ 0.8
SNIP1-202ENST00000468040 MAP3K5Q99683 1374 aa20.06■□□□□ 0.8
SNIP1-202ENST00000468040 GNAT3A8MTJ3 354 aa20.05■□□□□ 0.8
SNIP1-202ENST00000468040 APAF1O14727 1248 aa20.05■□□□□ 0.8
SNIP1-202ENST00000468040 TMPOP42166 694 aaKnown RBP20.05■□□□□ 0.8
SNIP1-202ENST00000468040 NKX1-1Q15270 411 aaPredicted RBP20.05■□□□□ 0.8
SNIP1-202ENST00000468040 BCL9O00512 1426 aa20.03■□□□□ 0.8
SNIP1-202ENST00000468040 HTATSF1O43719 755 aaKnown RBP20.03■□□□□ 0.8
SNIP1-202ENST00000468040 RIPK4P57078 832 aa20.03■□□□□ 0.8
SNIP1-202ENST00000468040 LMOD3Q0VAK6 560 aa20.03■□□□□ 0.8
SNIP1-202ENST00000468040 DCAF5Q96JK2 942 aa20.03■□□□□ 0.8
SNIP1-202ENST00000468040 RTF1Q92541 710 aaKnown RBP20.02■□□□□ 0.8
SNIP1-202ENST00000468040 NCBP3Q53F19 620 aaKnown RBP20.01■□□□□ 0.79
SNIP1-202ENST00000468040 FAM196AQ6ZSG2 479 aa20.01■□□□□ 0.79
SNIP1-202ENST00000468040 NGEFQ8N5V2 710 aa20.01■□□□□ 0.79
SNIP1-202ENST00000468040 RRP7AQ9Y3A4 280 aaKnown RBP20.01■□□□□ 0.79
SNIP1-202ENST00000468040 DLG5Q8TDM6 1919 aa20■□□□□ 0.79
SNIP1-202ENST00000468040 NEUROD2Q15784 382 aa20■□□□□ 0.79
SNIP1-202ENST00000468040 MPRIPQ6WCQ1 1025 aa19.99■□□□□ 0.79
SNIP1-202ENST00000468040 ADAMTS7Q9UKP4 1686 aa19.99■□□□□ 0.79
SNIP1-202ENST00000468040 KDM6AO15550 1401 aaPredicted RBP19.99■□□□□ 0.79
SNIP1-202ENST00000468040 FAM182BQ5T319 152 aa19.98■□□□□ 0.79
SNIP1-202ENST00000468040 SCN11AQ9UI33 1791 aa19.98■□□□□ 0.79
SNIP1-202ENST00000468040 DOT1LQ8TEK3 1739 aa19.97■□□□□ 0.79
SNIP1-202ENST00000468040 RNMTO43148 476 aaKnown RBP19.97■□□□□ 0.79
SNIP1-202ENST00000468040 CCDC27Q2M243 656 aa19.97■□□□□ 0.79
SNIP1-202ENST00000468040 CEMIPQ8WUJ3 1361 aa19.96■□□□□ 0.79
SNIP1-202ENST00000468040 ERVV-2B6SEH9 535 aa19.96■□□□□ 0.79
SNIP1-202ENST00000468040 IL17REQ8NFR9 667 aa19.96■□□□□ 0.79
SNIP1-202ENST00000468040 TOGARAM1Q9Y4F4 1720 aa19.96■□□□□ 0.79
SNIP1-202ENST00000468040 MRC1P22897 1456 aa19.95■□□□□ 0.78
SNIP1-202ENST00000468040 MCM10Q7L590 875 aa19.95■□□□□ 0.78
SNIP1-202ENST00000468040 LGR6Q9HBX8 967 aa19.95■□□□□ 0.78
SNIP1-202ENST00000468040 TRIM35Q9UPQ4 493 aa19.95■□□□□ 0.78
SNIP1-202ENST00000468040 VIRMAQ69YN4 1812 aaKnown RBP19.95■□□□□ 0.78
SNIP1-202ENST00000468040 NHSQ6T4R5 1651 aa19.94■□□□□ 0.78
SNIP1-202ENST00000468040 CABP4P57796 275 aa19.93■□□□□ 0.78
SNIP1-202ENST00000468040 CALD1Q05682 793 aaKnown RBP19.93■□□□□ 0.78
SNIP1-202ENST00000468040 TEFQ10587 303 aa19.93■□□□□ 0.78
SNIP1-202ENST00000468040 DCTN1Q14203 1278 aa19.93■□□□□ 0.78
SNIP1-202ENST00000468040 SBF2Q86WG5 1849 aa19.92■□□□□ 0.78
SNIP1-202ENST00000468040 SENP3-EIF4A1A0A087X0R7 540 aa19.92■□□□□ 0.78
SNIP1-202ENST00000468040 PRIM1P49642 420 aaKnown RBP19.92■□□□□ 0.78
SNIP1-202ENST00000468040 HNRNPUQ00839 825 aaKnown RBP eCLIP19.92■□□□□ 0.78
SNIP1-202ENST00000468040 SYTL4Q96C24 671 aaPredicted RBP19.92■□□□□ 0.78
SNIP1-202ENST00000468040 ACSBG1Q96GR2 724 aa19.92■□□□□ 0.78
SNIP1-202ENST00000468040 SLC52A2Q9HAB3 445 aa19.92■□□□□ 0.78
SNIP1-202ENST00000468040 TMOD3Q9NYL9 352 aa19.92■□□□□ 0.78
SNIP1-202ENST00000468040 WWC1Q8IX03 1113 aa19.91■□□□□ 0.78
SNIP1-202ENST00000468040 THUMPD2Q9BTF0 503 aaKnown RBP19.91■□□□□ 0.78
SNIP1-202ENST00000468040 SALL2Q9Y467 1007 aaPredicted RBP19.91■□□□□ 0.78
SNIP1-202ENST00000468040 ITGB4P16144 1822 aa19.9■□□□□ 0.78
SNIP1-202ENST00000468040 BCL11BQ9C0K0 894 aaPredicted RBP19.9■□□□□ 0.78
SNIP1-202ENST00000468040 NFATC2IPQ8NCF5 419 aa19.89■□□□□ 0.77
SNIP1-202ENST00000468040 SIPA1L3O60292 1781 aaPredicted RBP19.88■□□□□ 0.77
SNIP1-202ENST00000468040 KCNQ2O43526 872 aa19.88■□□□□ 0.77
SNIP1-202ENST00000468040 TRIM37O94972 964 aa19.88■□□□□ 0.77
SNIP1-202ENST00000468040 KAT6BQ8WYB5 2073 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms