RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 FNBP4Q8N3X1 1017 aaPredicted RBP7.94□□□□□ -1.14
SMC4-208ENST00000467468 PLPP7Q8NBV4 271 aa7.94□□□□□ -1.14
SMC4-208ENST00000467468 NFATC2IPQ8NCF5 419 aa7.94□□□□□ -1.14
SMC4-208ENST00000467468 POLMQ9NP87 494 aaPredicted RBP7.94□□□□□ -1.14
SMC4-208ENST00000467468 TTLL8A6PVC2 850 aa7.93□□□□□ -1.14
SMC4-208ENST00000467468 SCTRP47872 440 aa7.93□□□□□ -1.14
SMC4-208ENST00000467468 CHIC2Q9UKJ5 165 aa7.93□□□□□ -1.14
SMC4-208ENST00000467468 SOS2Q07890 1332 aaPredicted RBP7.93□□□□□ -1.14
SMC4-208ENST00000467468 TRAK2O60296 914 aa7.92□□□□□ -1.14
SMC4-208ENST00000467468 LZTS3O60299 673 aaPredicted RBP7.92□□□□□ -1.14
SMC4-208ENST00000467468 SKIP12755 728 aa7.92□□□□□ -1.14
SMC4-208ENST00000467468 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.92□□□□□ -1.142e-41■■■■■ 207.1
SMC4-208ENST00000467468 HDGFL1Q5TGJ6 251 aa7.92□□□□□ -1.14
SMC4-208ENST00000467468 INSM2Q96T92 566 aaPredicted RBP7.92□□□□□ -1.14
SMC4-208ENST00000467468 CDCA7Q9BWT1 371 aaPredicted RBP7.92□□□□□ -1.14
SMC4-208ENST00000467468 ZNF395Q9H8N7 513 aaPredicted RBP7.92□□□□□ -1.14
SMC4-208ENST00000467468 EML3Q32P44 896 aa7.91□□□□□ -1.14
SMC4-208ENST00000467468 GLMNQ92990 594 aa7.91□□□□□ -1.14
SMC4-208ENST00000467468 NLRP3Q96P20 1036 aa7.91□□□□□ -1.14
SMC4-208ENST00000467468 ZMYND15Q9H091 742 aa7.91□□□□□ -1.14
SMC4-208ENST00000467468 OSBPL3Q9H4L5 887 aa7.91□□□□□ -1.14
SMC4-208ENST00000467468 MEN1O00255 615 aa7.9□□□□□ -1.14
SMC4-208ENST00000467468 GNRH1P01148 92 aa7.9□□□□□ -1.14
SMC4-208ENST00000467468 ESCO1Q5FWF5 840 aa7.9□□□□□ -1.14
SMC4-208ENST00000467468 CALR3Q96L12 384 aaKnown RBP7.9□□□□□ -1.14
SMC4-208ENST00000467468 A0A1W2PRU2 124 aa7.89□□□□□ -1.15
SMC4-208ENST00000467468 GPC1P35052 558 aa7.89□□□□□ -1.15
SMC4-208ENST00000467468 CTSOP43234 321 aaPredicted RBP7.89□□□□□ -1.15
SMC4-208ENST00000467468 ARHGEF10LQ9HCE6 1279 aa7.89□□□□□ -1.15
SMC4-208ENST00000467468 DNMT3LQ9UJW3 386 aa7.89□□□□□ -1.15
SMC4-208ENST00000467468 USP17L5A8MUK1 530 aa7.88□□□□□ -1.15
SMC4-208ENST00000467468 PIK3CDO00329 1044 aa7.88□□□□□ -1.15
SMC4-208ENST00000467468 CLN3Q13286 438 aa7.88□□□□□ -1.15
SMC4-208ENST00000467468 TSGA10IPQ3SY00 556 aa7.88□□□□□ -1.15
SMC4-208ENST00000467468 KDF1Q8NAX2 398 aaPredicted RBP7.88□□□□□ -1.15
SMC4-208ENST00000467468 ADAMTS19Q8TE59 1207 aa7.88□□□□□ -1.15
SMC4-208ENST00000467468 NOD1Q9Y239 953 aa7.88□□□□□ -1.15
SMC4-208ENST00000467468 FIGNL2A6NMB9 653 aa7.87□□□□□ -1.15
SMC4-208ENST00000467468 SOBPA7XYQ1 873 aa7.87□□□□□ -1.15
SMC4-208ENST00000467468 RNF144AP50876 292 aaPredicted RBP7.87□□□□□ -1.15
SMC4-208ENST00000467468 NPAS3Q8IXF0 933 aa7.87□□□□□ -1.15
SMC4-208ENST00000467468 RNF217Q8TC41 542 aa7.87□□□□□ -1.15
SMC4-208ENST00000467468 ZNF775Q96BV0 537 aaPredicted RBP7.87□□□□□ -1.15
SMC4-208ENST00000467468 NXF1Q9UBU9 619 aaKnown RBP7.87□□□□□ -1.15
SMC4-208ENST00000467468 ATP9BO43861 1147 aa7.86□□□□□ -1.15
SMC4-208ENST00000467468 GTF2E1P29083 439 aaPredicted RBP7.86□□□□□ -1.15
SMC4-208ENST00000467468 NCOA4Q13772 614 aa7.86□□□□□ -1.15
SMC4-208ENST00000467468 SLC27A3Q5K4L6 730 aa7.86□□□□□ -1.15
SMC4-208ENST00000467468 LYSMD3Q7Z3D4 306 aa7.86□□□□□ -1.15
SMC4-208ENST00000467468 TRIM50Q86XT4 487 aa7.86□□□□□ -1.15
SMC4-208ENST00000467468 PLEKHM2Q8IWE5 1019 aa7.86□□□□□ -1.15
SMC4-208ENST00000467468 SLC16A10Q8TF71 515 aa7.86□□□□□ -1.15
SMC4-208ENST00000467468 TERTO14746 1132 aaKnown RBP7.85□□□□□ -1.15
SMC4-208ENST00000467468 FOXD4L5Q5VV16 416 aaPredicted RBP7.85□□□□□ -1.15
SMC4-208ENST00000467468 ESYT1Q9BSJ8 1104 aa7.85□□□□□ -1.15
SMC4-208ENST00000467468 RAB6BQ9NRW1 208 aa7.85□□□□□ -1.15
SMC4-208ENST00000467468 USP17L3A6NCW0 530 aa7.84□□□□□ -1.15
SMC4-208ENST00000467468 USP17L4A6NCW7 530 aa7.84□□□□□ -1.15
SMC4-208ENST00000467468 PSME1Q06323 249 aa7.84□□□□□ -1.15
SMC4-208ENST00000467468 USP17L2Q6R6M4 530 aa7.84□□□□□ -1.15
SMC4-208ENST00000467468 TBC1D9Q6ZT07 1266 aa7.84□□□□□ -1.15
SMC4-208ENST00000467468 USP17L1Q7RTZ2 530 aa7.84□□□□□ -1.15
SMC4-208ENST00000467468 CNKSR1Q969H4 720 aa7.84□□□□□ -1.15
SMC4-208ENST00000467468 UCN2Q96RP3 112 aa7.84□□□□□ -1.15
SMC4-208ENST00000467468 ATP1A2P50993 1020 aa7.83□□□□□ -1.16
SMC4-208ENST00000467468 GTF2IP78347 998 aa7.83□□□□□ -1.16
SMC4-208ENST00000467468 ZNF777Q9ULD5 760 aaPredicted RBP7.83□□□□□ -1.16
SMC4-208ENST00000467468 WFS1O76024 890 aa7.82□□□□□ -1.16
SMC4-208ENST00000467468 IL2RAP01589 272 aa7.82□□□□□ -1.16
SMC4-208ENST00000467468 PTSQ03393 145 aa7.82□□□□□ -1.16
SMC4-208ENST00000467468 DEPDC4Q8N2C3 294 aa7.82□□□□□ -1.16
SMC4-208ENST00000467468 XAGE2Q96GT9 111 aa7.82□□□□□ -1.16
SMC4-208ENST00000467468 WASLO00401 505 aaPredicted RBP7.81□□□□□ -1.16
SMC4-208ENST00000467468 GDF10P55107 478 aa7.81□□□□□ -1.16
SMC4-208ENST00000467468 TREML4Q6UXN2 200 aa7.81□□□□□ -1.16
SMC4-208ENST00000467468 PRICKLE2Q7Z3G6 844 aa7.81□□□□□ -1.16
SMC4-208ENST00000467468 ZSCAN10Q96SZ4 725 aaPredicted RBP7.81□□□□□ -1.16
SMC4-208ENST00000467468 PPP1R12CQ9BZL4 782 aa7.81□□□□□ -1.16
SMC4-208ENST00000467468 GRIP2Q9C0E4 1043 aa7.81□□□□□ -1.16
SMC4-208ENST00000467468 ETNK1Q9HBU6 452 aa7.81□□□□□ -1.16
SMC4-208ENST00000467468 H3BM21 787 aa7.8□□□□□ -1.16
SMC4-208ENST00000467468 BACH1O14867 736 aa7.8□□□□□ -1.16
SMC4-208ENST00000467468 INHAP05111 366 aa7.8□□□□□ -1.16
SMC4-208ENST00000467468 CENPCQ03188 943 aa7.8□□□□□ -1.16
SMC4-208ENST00000467468 NFX1Q12986 1120 aaKnown RBP7.8□□□□□ -1.16
SMC4-208ENST00000467468 TLR1Q15399 786 aa7.8□□□□□ -1.16
SMC4-208ENST00000467468 WDR44Q5JSH3 913 aa7.8□□□□□ -1.16
SMC4-208ENST00000467468 GNASQ5JWF2 1037 aa7.8□□□□□ -1.16
SMC4-208ENST00000467468 TMEM214Q6NUQ4 689 aaKnown RBP7.8□□□□□ -1.16
SMC4-208ENST00000467468 IRF7Q92985 503 aa7.8□□□□□ -1.16
SMC4-208ENST00000467468 TFIP11Q9UBB9 837 aaKnown RBP7.8□□□□□ -1.16
SMC4-208ENST00000467468 RBM19Q9Y4C8 960 aaKnown RBP7.8□□□□□ -1.16
SMC4-208ENST00000467468 MAFBQ9Y5Q3 323 aaPredicted RBP7.8□□□□□ -1.16
SMC4-208ENST00000467468 PALM3A6NDB9 673 aaPredicted RBP7.79□□□□□ -1.16
SMC4-208ENST00000467468 SPATA31C2B4DYI2 1134 aa7.79□□□□□ -1.16
SMC4-208ENST00000467468 PPFIA3O75145 1194 aa7.79□□□□□ -1.16
SMC4-208ENST00000467468 SCNN1DP51172 638 aa7.79□□□□□ -1.16
SMC4-208ENST00000467468 TAS1R3Q7RTX0 852 aa7.79□□□□□ -1.16
SMC4-208ENST00000467468 CCDC155Q8N6L0 562 aa7.79□□□□□ -1.16
SMC4-208ENST00000467468 PCDHGA11Q9Y5H2 935 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms