RNA–Protein interactions for RNA: ENST00000466950.5

SEC22A-203, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-203ENST00000466950 USP21Q9UK80 565 aa17.45■□□□□ 0.38
SEC22A-203ENST00000466950 ZBED9Q6R2W3 1325 aa17.45■□□□□ 0.38
SEC22A-203ENST00000466950 AMOTQ4VCS5 1084 aa17.44■□□□□ 0.38
SEC22A-203ENST00000466950 TCP11L2Q8N4U5 519 aa17.44■□□□□ 0.38
SEC22A-203ENST00000466950 GAS2L2Q8NHY3 880 aa17.44■□□□□ 0.38
SEC22A-203ENST00000466950 RAPGEF4Q8WZA2 1011 aa17.44■□□□□ 0.38
SEC22A-203ENST00000466950 SIPA1L3O60292 1781 aaPredicted RBP17.43■□□□□ 0.38
SEC22A-203ENST00000466950 APAF1O14727 1248 aa17.43■□□□□ 0.38
SEC22A-203ENST00000466950 TATP17735 454 aaPredicted RBP17.43■□□□□ 0.38
SEC22A-203ENST00000466950 HNRNPUQ00839 825 aaKnown RBP eCLIP17.43■□□□□ 0.38
SEC22A-203ENST00000466950 NFE2L2Q16236 605 aa17.43■□□□□ 0.38
SEC22A-203ENST00000466950 CCDC27Q2M243 656 aa17.43■□□□□ 0.38
SEC22A-203ENST00000466950 PHACTR3Q96KR7 559 aa17.43■□□□□ 0.38
SEC22A-203ENST00000466950 CDCA7Q9BWT1 371 aaPredicted RBP17.43■□□□□ 0.38
SEC22A-203ENST00000466950 TNS2Q63HR2 1409 aa17.43■□□□□ 0.38
SEC22A-203ENST00000466950 IL2RBP14784 551 aa17.42■□□□□ 0.38
SEC22A-203ENST00000466950 TMPOP42166 694 aaKnown RBP17.42■□□□□ 0.38
SEC22A-203ENST00000466950 BARGINQ6ZT62 677 aa17.42■□□□□ 0.38
SEC22A-203ENST00000466950 TRPC5Q9UL62 973 aaPredicted RBP17.41■□□□□ 0.38
SEC22A-203ENST00000466950 LMOD3Q0VAK6 560 aa17.4■□□□□ 0.38
SEC22A-203ENST00000466950 PLEKHO1Q53GL0 409 aaPredicted RBP17.4■□□□□ 0.38
SEC22A-203ENST00000466950 MAP3K5Q99683 1374 aa17.4■□□□□ 0.38
SEC22A-203ENST00000466950 SPG7Q9UQ90 795 aa17.39■□□□□ 0.37
SEC22A-203ENST00000466950 ZNF521Q96K83 1311 aa17.39■□□□□ 0.37
SEC22A-203ENST00000466950 TOGARAM1Q9Y4F4 1720 aa17.38■□□□□ 0.37
SEC22A-203ENST00000466950 HTATSF1O43719 755 aaKnown RBP17.38■□□□□ 0.37
SEC22A-203ENST00000466950 MTHFSDQ2M296 383 aaKnown RBP17.38■□□□□ 0.37
SEC22A-203ENST00000466950 ZNF772Q68DY9 489 aaPredicted RBP17.38■□□□□ 0.37
SEC22A-203ENST00000466950 PCDH11XQ9BZA7 1347 aa17.38■□□□□ 0.37
SEC22A-203ENST00000466950 PCDH11YQ9BZA8 1340 aa17.38■□□□□ 0.37
SEC22A-203ENST00000466950 BRWD3Q6RI45 1802 aa17.37■□□□□ 0.37
SEC22A-203ENST00000466950 MRC1P22897 1456 aa17.37■□□□□ 0.37
SEC22A-203ENST00000466950 ITGB4P16144 1822 aa17.37■□□□□ 0.37
SEC22A-203ENST00000466950 RIPK4P57078 832 aa17.36■□□□□ 0.37
SEC22A-203ENST00000466950 YTHDC1Q96MU7 727 aaKnown RBP17.36■□□□□ 0.37
SEC22A-203ENST00000466950 USP35Q9P2H5 1018 aa17.36■□□□□ 0.37
SEC22A-203ENST00000466950 DOT1LQ8TEK3 1739 aa17.35■□□□□ 0.37
SEC22A-203ENST00000466950 KDM3BQ7LBC6 1761 aa17.35■□□□□ 0.37
SEC22A-203ENST00000466950 AKAP4Q5JQC9 854 aa17.35■□□□□ 0.37
SEC22A-203ENST00000466950 ZNF530Q6P9A1 599 aaPredicted RBP17.35■□□□□ 0.37
SEC22A-203ENST00000466950 ZCRB1Q8TBF4 217 aaKnown RBP17.35■□□□□ 0.37
SEC22A-203ENST00000466950 GJD4Q96KN9 370 aaPredicted RBP17.35■□□□□ 0.37
SEC22A-203ENST00000466950 TRIM35Q9UPQ4 493 aa17.35■□□□□ 0.37
SEC22A-203ENST00000466950 CCDC9Q9Y3X0 531 aaKnown RBP17.35■□□□□ 0.37
SEC22A-203ENST00000466950 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
SEC22A-203ENST00000466950 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
SEC22A-203ENST00000466950 CEMIPQ8WUJ3 1361 aa17.34■□□□□ 0.37
SEC22A-203ENST00000466950 RRP7AQ9Y3A4 280 aaKnown RBP17.34■□□□□ 0.37
SEC22A-203ENST00000466950 IL16Q14005 1332 aa17.33■□□□□ 0.36
SEC22A-203ENST00000466950 PDE3BQ13370 1112 aa17.33■□□□□ 0.36
SEC22A-203ENST00000466950 C1orf141Q5JVX7 400 aa17.33■□□□□ 0.36
SEC22A-203ENST00000466950 ILDR1Q86SU0 546 aaPredicted RBP17.33■□□□□ 0.36
SEC22A-203ENST00000466950 POTEDQ86YR6 584 aa17.33■□□□□ 0.36
SEC22A-203ENST00000466950 SBF2Q86WG5 1849 aa17.33■□□□□ 0.36
SEC22A-203ENST00000466950 PAPPAQ13219 1627 aa17.32■□□□□ 0.36
SEC22A-203ENST00000466950 KDM6AO15550 1401 aaPredicted RBP17.32■□□□□ 0.36
SEC22A-203ENST00000466950 ONECUT3O60422 494 aaPredicted RBP17.32■□□□□ 0.36
SEC22A-203ENST00000466950 HSP90AB1P08238 724 aaKnown RBP17.32■□□□□ 0.36
SEC22A-203ENST00000466950 PHKG2P15735 406 aa17.32■□□□□ 0.36
SEC22A-203ENST00000466950 CALD1Q05682 793 aaKnown RBP17.32■□□□□ 0.36
SEC22A-203ENST00000466950 WDR63Q8IWG1 891 aa17.32■□□□□ 0.36
SEC22A-203ENST00000466950 IFNL2Q8IZJ0 200 aa17.32■□□□□ 0.36
SEC22A-203ENST00000466950 QTRT2Q9H974 415 aaKnown RBP17.32■□□□□ 0.36
SEC22A-203ENST00000466950 NEUROD2Q15784 382 aa17.31■□□□□ 0.36
SEC22A-203ENST00000466950 RTF1Q92541 710 aaKnown RBP17.31■□□□□ 0.36
SEC22A-203ENST00000466950 KAT6BQ8WYB5 2073 aa17.31■□□□□ 0.36
SEC22A-203ENST00000466950 CYP27B1O15528 508 aa17.3■□□□□ 0.36
SEC22A-203ENST00000466950 NKX1-1Q15270 411 aaPredicted RBP17.3■□□□□ 0.36
SEC22A-203ENST00000466950 DDB1Q16531 1140 aa17.3■□□□□ 0.36
SEC22A-203ENST00000466950 FAM98CQ17RN3 349 aaKnown RBP17.3■□□□□ 0.36
SEC22A-203ENST00000466950 EXOC5O00471 708 aa17.29■□□□□ 0.36
SEC22A-203ENST00000466950 UBR2Q8IWV8 1755 aa17.29■□□□□ 0.36
SEC22A-203ENST00000466950 NHSQ6T4R5 1651 aa17.29■□□□□ 0.36
SEC22A-203ENST00000466950 BCL9O00512 1426 aa17.29■□□□□ 0.36
SEC22A-203ENST00000466950 RBM6P78332 1123 aaKnown RBP17.28■□□□□ 0.36
SEC22A-203ENST00000466950 GOLGA2Q08379 1002 aa17.28■□□□□ 0.36
SEC22A-203ENST00000466950 DCAF5Q96JK2 942 aa17.28■□□□□ 0.36
SEC22A-203ENST00000466950 SALL2Q9Y467 1007 aaPredicted RBP17.28■□□□□ 0.36
SEC22A-203ENST00000466950 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
SEC22A-203ENST00000466950 E9PSI1 815 aa17.26■□□□□ 0.35
SEC22A-203ENST00000466950 RNMTO43148 476 aaKnown RBP17.26■□□□□ 0.35
SEC22A-203ENST00000466950 IFT57Q9NWB7 429 aa17.26■□□□□ 0.35
SEC22A-203ENST00000466950 MCM10Q7L590 875 aa17.25■□□□□ 0.35
SEC22A-203ENST00000466950 IL17REQ8NFR9 667 aa17.25■□□□□ 0.35
SEC22A-203ENST00000466950 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
SEC22A-203ENST00000466950 RGS17Q9UGC6 210 aaPredicted RBP17.25■□□□□ 0.35
SEC22A-203ENST00000466950 CACNA1FO60840 1977 aa17.25■□□□□ 0.35
SEC22A-203ENST00000466950 SLFN5Q08AF3 891 aa17.24■□□□□ 0.35
SEC22A-203ENST00000466950 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
SEC22A-203ENST00000466950 ZNF853P0CG23 659 aa17.23■□□□□ 0.35
SEC22A-203ENST00000466950 GNAI1P63096 354 aa17.23■□□□□ 0.35
SEC22A-203ENST00000466950 DCTN1Q14203 1278 aa17.23■□□□□ 0.35
SEC22A-203ENST00000466950 MPRIPQ6WCQ1 1025 aa17.23■□□□□ 0.35
SEC22A-203ENST00000466950 TRMT2AQ8IZ69 625 aaKnown RBP17.23■□□□□ 0.35
SEC22A-203ENST00000466950 CFAP44Q96MT7 982 aa17.23■□□□□ 0.35
SEC22A-203ENST00000466950 THUMPD2Q9BTF0 503 aaKnown RBP17.23■□□□□ 0.35
SEC22A-203ENST00000466950 MYH16Q9H6N6 1097 aa17.23■□□□□ 0.35
SEC22A-203ENST00000466950 LAMB4A4D0S4 1761 aa17.23■□□□□ 0.35
SEC22A-203ENST00000466950 RGS12O14924 1447 aa17.22■□□□□ 0.35
SEC22A-203ENST00000466950 CICQ96RK0 1608 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms