RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 MPNDQ8N594 471 aa12.22□□□□□ -0.45
LSG1-206ENST00000466391 CALR3Q96L12 384 aaKnown RBP12.22□□□□□ -0.45
LSG1-206ENST00000466391 KCTD15Q96SI1 283 aaPredicted RBP12.22□□□□□ -0.45
LSG1-206ENST00000466391 MAP4K5Q9Y4K4 846 aa12.22□□□□□ -0.45
LSG1-206ENST00000466391 PBRM1Q86U86 1689 aa12.22□□□□□ -0.45
LSG1-206ENST00000466391 FMN1Q68DA7 1419 aa12.21□□□□□ -0.45
LSG1-206ENST00000466391 CCNB3Q8WWL7 1395 aa12.21□□□□□ -0.45
LSG1-206ENST00000466391 TOR4AQ9NXH8 423 aa12.21□□□□□ -0.45
LSG1-206ENST00000466391 CEP126Q9P2H0 1117 aa12.21□□□□□ -0.45
LSG1-206ENST00000466391 WDR62O43379 1518 aa12.21□□□□□ -0.46
LSG1-206ENST00000466391 J3QL48 77 aa12.2□□□□□ -0.46
LSG1-206ENST00000466391 GIGYF1O75420 1035 aaPredicted RBP12.2□□□□□ -0.46
LSG1-206ENST00000466391 RAB15P59190 212 aa12.2□□□□□ -0.46
LSG1-206ENST00000466391 WASF2Q9Y6W5 498 aa12.2□□□□□ -0.46
LSG1-206ENST00000466391 ADAMTS12P58397 1594 aa12.19□□□□□ -0.46
LSG1-206ENST00000466391 ADH1CP00326 375 aa12.19□□□□□ -0.46
LSG1-206ENST00000466391 FSHRP23945 695 aa12.19□□□□□ -0.46
LSG1-206ENST00000466391 GRM5P41594 1212 aa12.19□□□□□ -0.46
LSG1-206ENST00000466391 SNAPC4Q5SXM2 1469 aa12.18□□□□□ -0.46
LSG1-206ENST00000466391 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
LSG1-206ENST00000466391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
LSG1-206ENST00000466391 IFT140Q96RY7 1462 aa12.17□□□□□ -0.46
LSG1-206ENST00000466391 GFRA3O60609 400 aa12.17□□□□□ -0.46
LSG1-206ENST00000466391 FHOD3Q2V2M9 1422 aa12.17□□□□□ -0.46
LSG1-206ENST00000466391 SLFNL1Q499Z3 407 aa12.16□□□□□ -0.46
LSG1-206ENST00000466391 ESPNB1AK53 854 aa12.15□□□□□ -0.46
LSG1-206ENST00000466391 SMPD1P17405 629 aa12.15□□□□□ -0.46
LSG1-206ENST00000466391 NR5A1Q13285 461 aa12.15□□□□□ -0.46
LSG1-206ENST00000466391 INTS6LQ5JSJ4 861 aaKnown RBP12.15□□□□□ -0.46
LSG1-206ENST00000466391 GRIN2BQ13224 1484 aa12.14□□□□□ -0.47
LSG1-206ENST00000466391 NNTQ13423 1086 aa12.14□□□□□ -0.47
LSG1-206ENST00000466391 C1orf115Q9H7X2 142 aa12.14□□□□□ -0.47
LSG1-206ENST00000466391 DHX57Q6P158 1386 aaKnown RBP12.14□□□□□ -0.47
LSG1-206ENST00000466391 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
LSG1-206ENST00000466391 PIK3CDO00329 1044 aa12.13□□□□□ -0.47
LSG1-206ENST00000466391 NR3C2P08235 984 aa12.13□□□□□ -0.47
LSG1-206ENST00000466391 RNF20Q5VTR2 975 aa12.13□□□□□ -0.47
LSG1-206ENST00000466391 RNF135Q8IUD6 432 aa12.13□□□□□ -0.47
LSG1-206ENST00000466391 SEPT12Q8IYM1 358 aa12.12□□□□□ -0.47
LSG1-206ENST00000466391 CCDC116Q8IYX3 515 aa12.12□□□□□ -0.47
LSG1-206ENST00000466391 PHTF2Q8N3S3 785 aa12.12□□□□□ -0.47
LSG1-206ENST00000466391 UCN2Q96RP3 112 aa12.12□□□□□ -0.47
LSG1-206ENST00000466391 IQGAP2Q13576 1575 aa12.11□□□□□ -0.47
LSG1-206ENST00000466391 FAM187AA6NFU0 413 aa12.11□□□□□ -0.47
LSG1-206ENST00000466391 PHLDB1Q86UU1 1377 aa12.1□□□□□ -0.47
LSG1-206ENST00000466391 HPS1Q92902 700 aa12.1□□□□□ -0.47
LSG1-206ENST00000466391 CCDC85AQ96PX6 553 aaPredicted RBP12.1□□□□□ -0.47
LSG1-206ENST00000466391 UGGT2Q9NYU1 1516 aa12.1□□□□□ -0.47
LSG1-206ENST00000466391 ERVH48-1M5A8F1 160 aa12.09□□□□□ -0.47
LSG1-206ENST00000466391 NRG2O14511 850 aaPredicted RBP12.09□□□□□ -0.47
LSG1-206ENST00000466391 SKIP12755 728 aa12.09□□□□□ -0.47
LSG1-206ENST00000466391 DHX9Q08211 1270 aaKnown RBP12.09□□□□□ -0.47
LSG1-206ENST00000466391 TSGA10IPQ3SY00 556 aa12.09□□□□□ -0.47
LSG1-206ENST00000466391 PPP1R26Q5T8A7 1209 aaPredicted RBP12.09□□□□□ -0.47
LSG1-206ENST00000466391 TBC1D9Q6ZT07 1266 aa12.09□□□□□ -0.47
LSG1-206ENST00000466391 IRX2Q9BZI1 471 aaPredicted RBP12.09□□□□□ -0.47
LSG1-206ENST00000466391 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.47
LSG1-206ENST00000466391 EHBP1L1Q8N3D4 1523 aa12.08□□□□□ -0.48
LSG1-206ENST00000466391 CCDC97Q96F63 343 aaPredicted RBP12.08□□□□□ -0.48
LSG1-206ENST00000466391 TMPRSS4Q9NRS4 437 aa12.08□□□□□ -0.48
LSG1-206ENST00000466391 PCDHB11Q9Y5F2 797 aa12.08□□□□□ -0.48
LSG1-206ENST00000466391 LRRIQ1Q96JM4 1722 aa12.08□□□□□ -0.48
LSG1-206ENST00000466391 CCDC82Q8N4S0 544 aa12.07□□□□□ -0.48
LSG1-206ENST00000466391 TFIP11Q9UBB9 837 aaKnown RBP12.07□□□□□ -0.48
LSG1-206ENST00000466391 ARHGEF11O15085 1522 aa12.06□□□□□ -0.48
LSG1-206ENST00000466391 LAPTM4AQ15012 233 aa12.06□□□□□ -0.48
LSG1-206ENST00000466391 PKDCCQ504Y2 493 aa12.06□□□□□ -0.48
LSG1-206ENST00000466391 PLPP7Q8NBV4 271 aa12.06□□□□□ -0.48
LSG1-206ENST00000466391 PPP1R12CQ9BZL4 782 aa12.06□□□□□ -0.48
LSG1-206ENST00000466391 DOLKQ9UPQ8 538 aa12.06□□□□□ -0.48
LSG1-206ENST00000466391 EMILIN1Q9Y6C2 1016 aa12.06□□□□□ -0.48
LSG1-206ENST00000466391 HECW1Q76N89 1606 aa12.06□□□□□ -0.48
LSG1-206ENST00000466391 PALM3A6NDB9 673 aaPredicted RBP12.05□□□□□ -0.48
LSG1-206ENST00000466391 WDR4P57081 412 aaKnown RBP12.05□□□□□ -0.48
LSG1-206ENST00000466391 CCDC125Q86Z20 511 aa12.05□□□□□ -0.48
LSG1-206ENST00000466391 NFATC2IPQ8NCF5 419 aa12.05□□□□□ -0.48
LSG1-206ENST00000466391 CDCA7Q9BWT1 371 aaPredicted RBP12.05□□□□□ -0.48
LSG1-206ENST00000466391 SERPINA10Q9UK55 444 aa12.05□□□□□ -0.48
LSG1-206ENST00000466391 SETD5Q9C0A6 1442 aa12.04□□□□□ -0.48
LSG1-206ENST00000466391 SUPT6HQ7KZ85 1726 aaKnown RBP12.04□□□□□ -0.48
LSG1-206ENST00000466391 ATP9BO43861 1147 aa12.04□□□□□ -0.48
LSG1-206ENST00000466391 ZNF784Q8NCA9 323 aaPredicted RBP12.04□□□□□ -0.48
LSG1-206ENST00000466391 ITPKCQ96DU7 683 aa12.04□□□□□ -0.48
LSG1-206ENST00000466391 PGPEP1Q9NXJ5 209 aa12.04□□□□□ -0.48
LSG1-206ENST00000466391 CHIC2Q9UKJ5 165 aa12.04□□□□□ -0.48
LSG1-206ENST00000466391 KIAA0586Q9BVV6 1533 aa12.04□□□□□ -0.48
LSG1-206ENST00000466391 EIF4G3O43432 1585 aaKnown RBP12.04□□□□□ -0.48
LSG1-206ENST00000466391 FGD6Q6ZV73 1430 aa12.03□□□□□ -0.48
LSG1-206ENST00000466391 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
LSG1-206ENST00000466391 DGAT1O75907 488 aa12.03□□□□□ -0.48
LSG1-206ENST00000466391 ZIC2O95409 532 aaPredicted RBP12.03□□□□□ -0.48
LSG1-206ENST00000466391 MAP7D1Q3KQU3 841 aa12.03□□□□□ -0.48
LSG1-206ENST00000466391 OXLD1Q5BKU9 147 aa12.03□□□□□ -0.48
LSG1-206ENST00000466391 DEPDC4Q8N2C3 294 aa12.03□□□□□ -0.48
LSG1-206ENST00000466391 ARID3AQ99856 593 aa12.03□□□□□ -0.48
LSG1-206ENST00000466391 CYLDQ9NQC7 956 aa12.03□□□□□ -0.48
LSG1-206ENST00000466391 USP17L5A8MUK1 530 aa12.02□□□□□ -0.49
LSG1-206ENST00000466391 TIMP2P16035 220 aa12.02□□□□□ -0.49
LSG1-206ENST00000466391 TRAF7Q6Q0C0 670 aa12.02□□□□□ -0.49
LSG1-206ENST00000466391 KLF16Q9BXK1 252 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms