RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ZNF772Q68DY9 489 aaPredicted RBP14.8□□□□□ -0.04
VCP-204ENST00000466100 RUNDC1Q96C34 613 aa14.8□□□□□ -0.04
VCP-204ENST00000466100 PHACTR3Q96KR7 559 aa14.8□□□□□ -0.04
VCP-204ENST00000466100 USP35Q9P2H5 1018 aa14.8□□□□□ -0.04
VCP-204ENST00000466100 IL2RBP14784 551 aa14.79□□□□□ -0.04
VCP-204ENST00000466100 RAPGEF4Q8WZA2 1011 aa14.79□□□□□ -0.04
VCP-204ENST00000466100 GJD4Q96KN9 370 aaPredicted RBP14.79□□□□□ -0.04
VCP-204ENST00000466100 QTRT2Q9H974 415 aaKnown RBP14.79□□□□□ -0.04
VCP-204ENST00000466100 SCN11AQ9UI33 1791 aa14.79□□□□□ -0.04
VCP-204ENST00000466100 TATP17735 454 aaPredicted RBP14.78□□□□□ -0.04
VCP-204ENST00000466100 PNNQ9H307 717 aaKnown RBP14.78□□□□□ -0.04
VCP-204ENST00000466100 ONECUT3O60422 494 aaPredicted RBP14.77□□□□□ -0.05
VCP-204ENST00000466100 CDCA7Q9BWT1 371 aaPredicted RBP14.77□□□□□ -0.05
VCP-204ENST00000466100 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.77□□□□□ -0.053e-7■■■□□ 15.5
VCP-204ENST00000466100 CCDC9Q9Y3X0 531 aaKnown RBP14.77□□□□□ -0.05
VCP-204ENST00000466100 TOGARAM1Q9Y4F4 1720 aa14.77□□□□□ -0.05
VCP-204ENST00000466100 SIPA1L3O60292 1781 aaPredicted RBP14.76□□□□□ -0.05
VCP-204ENST00000466100 MAPK8IP3Q9UPT6 1336 aa14.76□□□□□ -0.05
VCP-204ENST00000466100 FAM98CQ17RN3 349 aaKnown RBP14.76□□□□□ -0.05
VCP-204ENST00000466100 MTHFSDQ2M296 383 aaKnown RBP14.76□□□□□ -0.05
VCP-204ENST00000466100 APAF1O14727 1248 aa14.75□□□□□ -0.05
VCP-204ENST00000466100 NFE2L2Q16236 605 aa14.75□□□□□ -0.05
VCP-204ENST00000466100 AMOTQ4VCS5 1084 aa14.75□□□□□ -0.05
VCP-204ENST00000466100 TMPOP42166 694 aaKnown RBP14.74□□□□□ -0.05
VCP-204ENST00000466100 RBM6P78332 1123 aaKnown RBP14.74□□□□□ -0.05
VCP-204ENST00000466100 PLEKHO1Q53GL0 409 aaPredicted RBP14.74□□□□□ -0.05
VCP-204ENST00000466100 POTEAQ6S8J7 498 aa14.74□□□□□ -0.05
VCP-204ENST00000466100 DOT1LQ8TEK3 1739 aa14.73□□□□□ -0.05
VCP-204ENST00000466100 CYP27B1O15528 508 aa14.73□□□□□ -0.05
VCP-204ENST00000466100 NCBP3Q53F19 620 aaKnown RBP14.73□□□□□ -0.05
VCP-204ENST00000466100 GAS2L2Q8NHY3 880 aa14.73□□□□□ -0.05
VCP-204ENST00000466100 ZCRB1Q8TBF4 217 aaKnown RBP14.73□□□□□ -0.05
VCP-204ENST00000466100 PHF23Q9BUL5 403 aaPredicted RBP14.73□□□□□ -0.05
VCP-204ENST00000466100 SPG7Q9UQ90 795 aa14.73□□□□□ -0.05
VCP-204ENST00000466100 ITGB4P16144 1822 aa14.73□□□□□ -0.05
VCP-204ENST00000466100 SBF2Q86WG5 1849 aa14.73□□□□□ -0.05
VCP-204ENST00000466100 MAP3K5Q99683 1374 aa14.73□□□□□ -0.05
VCP-204ENST00000466100 PCDH11XQ9BZA7 1347 aa14.72□□□□□ -0.05
VCP-204ENST00000466100 PCDH11YQ9BZA8 1340 aa14.72□□□□□ -0.05
VCP-204ENST00000466100 ZNF530Q6P9A1 599 aaPredicted RBP14.72□□□□□ -0.05
VCP-204ENST00000466100 RGS12O14924 1447 aa14.72□□□□□ -0.05
VCP-204ENST00000466100 KDM6AO15550 1401 aaPredicted RBP14.72□□□□□ -0.05
VCP-204ENST00000466100 MRC1P22897 1456 aa14.71□□□□□ -0.05
VCP-204ENST00000466100 NEFMP07197 916 aa14.71□□□□□ -0.05
VCP-204ENST00000466100 PHKG2P15735 406 aa14.71□□□□□ -0.05
VCP-204ENST00000466100 TRIM35Q9UPQ4 493 aa14.71□□□□□ -0.05
VCP-204ENST00000466100 RRP7AQ9Y3A4 280 aaKnown RBP14.71□□□□□ -0.05
VCP-204ENST00000466100 ZNF521Q96K83 1311 aa14.7□□□□□ -0.06
VCP-204ENST00000466100 SENP3-EIF4A1A0A087X0R7 540 aa14.7□□□□□ -0.06
VCP-204ENST00000466100 DDB1Q16531 1140 aa14.7□□□□□ -0.06
VCP-204ENST00000466100 CCDC27Q2M243 656 aa14.7□□□□□ -0.06
VCP-204ENST00000466100 AKAP4Q5JQC9 854 aa14.7□□□□□ -0.06
VCP-204ENST00000466100 EXOC5O00471 708 aa14.69□□□□□ -0.06
VCP-204ENST00000466100 RIPK4P57078 832 aa14.69□□□□□ -0.06
VCP-204ENST00000466100 NKX1-1Q15270 411 aaPredicted RBP14.69□□□□□ -0.06
VCP-204ENST00000466100 SEPT12Q8IYM1 358 aa14.69□□□□□ -0.06
VCP-204ENST00000466100 IFNL2Q8IZJ0 200 aa14.69□□□□□ -0.06
VCP-204ENST00000466100 NGEFQ8N5V2 710 aa14.69□□□□□ -0.06
VCP-204ENST00000466100 CEMIPQ8WUJ3 1361 aa14.69□□□□□ -0.06
VCP-204ENST00000466100 NHSQ6T4R5 1651 aa14.68□□□□□ -0.06
VCP-204ENST00000466100 PAPPAQ13219 1627 aa14.68□□□□□ -0.06
VCP-204ENST00000466100 GNAT3A8MTJ3 354 aa14.68□□□□□ -0.06
VCP-204ENST00000466100 HTATSF1O43719 755 aaKnown RBP14.68□□□□□ -0.06
VCP-204ENST00000466100 RXRBP28702 533 aa14.68□□□□□ -0.06
VCP-204ENST00000466100 HNRNPUQ00839 825 aaKnown RBP eCLIP14.68□□□□□ -0.06
VCP-204ENST00000466100 MARCH10Q8NA82 808 aaPredicted RBP14.68□□□□□ -0.06
VCP-204ENST00000466100 KDM3BQ7LBC6 1761 aa14.68□□□□□ -0.06
VCP-204ENST00000466100 BCL9O00512 1426 aa14.67□□□□□ -0.06
VCP-204ENST00000466100 KAT6BQ8WYB5 2073 aa14.67□□□□□ -0.06
VCP-204ENST00000466100 NEUROD2Q15784 382 aa14.67□□□□□ -0.06
VCP-204ENST00000466100 C1orf141Q5JVX7 400 aa14.67□□□□□ -0.06
VCP-204ENST00000466100 ZBED9Q6R2W3 1325 aa14.66□□□□□ -0.06
VCP-204ENST00000466100 LMOD3Q0VAK6 560 aa14.66□□□□□ -0.06
VCP-204ENST00000466100 WWC1Q8IX03 1113 aa14.66□□□□□ -0.06
VCP-204ENST00000466100 IL17REQ8NFR9 667 aa14.66□□□□□ -0.06
VCP-204ENST00000466100 RNMTO43148 476 aaKnown RBP14.65□□□□□ -0.06
VCP-204ENST00000466100 DCTN1Q14203 1278 aa14.65□□□□□ -0.06
VCP-204ENST00000466100 DDX54Q8TDD1 881 aaKnown RBP14.65□□□□□ -0.06
VCP-204ENST00000466100 LGR6Q9HBX8 967 aa14.65□□□□□ -0.06
VCP-204ENST00000466100 UBR2Q8IWV8 1755 aa14.65□□□□□ -0.06
VCP-204ENST00000466100 A0A0G2JS52 829 aa14.64□□□□□ -0.07
VCP-204ENST00000466100 HSP90AB1P08238 724 aaKnown RBP14.64□□□□□ -0.07
VCP-204ENST00000466100 MYT1Q01538 1121 aa14.64□□□□□ -0.07
VCP-204ENST00000466100 MPRIPQ6WCQ1 1025 aa14.64□□□□□ -0.07
VCP-204ENST00000466100 MCM10Q7L590 875 aa14.64□□□□□ -0.07
VCP-204ENST00000466100 DCAF5Q96JK2 942 aa14.64□□□□□ -0.07
VCP-204ENST00000466100 THUMPD2Q9BTF0 503 aaKnown RBP14.64□□□□□ -0.07
VCP-204ENST00000466100 SALL2Q9Y467 1007 aaPredicted RBP14.64□□□□□ -0.07
VCP-204ENST00000466100 BTAF1O14981 1849 aa14.63□□□□□ -0.07
VCP-204ENST00000466100 PDE3BQ13370 1112 aa14.62□□□□□ -0.07
VCP-204ENST00000466100 RTF1Q92541 710 aaKnown RBP14.62□□□□□ -0.07
VCP-204ENST00000466100 YTHDC1Q96MU7 727 aaKnown RBP14.62□□□□□ -0.07
VCP-204ENST00000466100 KRT27Q7Z3Y8 459 aa14.61□□□□□ -0.07
VCP-204ENST00000466100 WDR63Q8IWG1 891 aa14.61□□□□□ -0.07
VCP-204ENST00000466100 IL16Q14005 1332 aa14.61□□□□□ -0.07
VCP-204ENST00000466100 TNS1Q9HBL0 1735 aaKnown RBP14.61□□□□□ -0.07
VCP-204ENST00000466100 ERVV-2B6SEH9 535 aa14.6□□□□□ -0.07
VCP-204ENST00000466100 ZNF853P0CG23 659 aa14.6□□□□□ -0.07
VCP-204ENST00000466100 SLC52A2Q9HAB3 445 aa14.6□□□□□ -0.07
VCP-204ENST00000466100 FAM182BQ5T319 152 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms