RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 ZCRB1Q8TBF4 217 aaKnown RBP12.04□□□□□ -0.48
DDR1-242ENST00000465966 YBX3P16989 372 aaKnown RBP eCLIP12.03□□□□□ -0.48
DDR1-242ENST00000465966 COG3Q96JB2 828 aa12.03□□□□□ -0.48
DDR1-242ENST00000465966 CARD11Q9BXL7 1154 aa12.03□□□□□ -0.48
DDR1-242ENST00000465966 GPBP1L1Q9HC44 474 aaPredicted RBP12.03□□□□□ -0.48
DDR1-242ENST00000465966 CHD4Q14839 1912 aa12.03□□□□□ -0.48
DDR1-242ENST00000465966 USP47Q96K76 1375 aa12.03□□□□□ -0.48
DDR1-242ENST00000465966 RGPD5Q99666 1765 aa12.02□□□□□ -0.48
DDR1-242ENST00000465966 COL23A1Q86Y22 540 aaPredicted RBP12.02□□□□□ -0.49
DDR1-242ENST00000465966 FLAD1Q8NFF5 587 aa12.02□□□□□ -0.49
DDR1-242ENST00000465966 PUS7Q96PZ0 661 aaKnown RBP12.02□□□□□ -0.49
DDR1-242ENST00000465966 CD2APQ9Y5K6 639 aa12.02□□□□□ -0.49
DDR1-242ENST00000465966 BTAF1O14981 1849 aa12.01□□□□□ -0.49
DDR1-242ENST00000465966 CD163L1Q9NR16 1453 aa12.01□□□□□ -0.49
DDR1-242ENST00000465966 HOXC9P31274 260 aa12□□□□□ -0.49
DDR1-242ENST00000465966 MSL1Q68DK7 614 aa12□□□□□ -0.49
DDR1-242ENST00000465966 CGNL1Q0VF96 1302 aa12□□□□□ -0.49
DDR1-242ENST00000465966 A0A1W2PP64 1363 aa12□□□□□ -0.49
DDR1-242ENST00000465966 RAPGEF4Q8WZA2 1011 aa11.99□□□□□ -0.49
DDR1-242ENST00000465966 MAP3K19Q56UN5 1328 aa11.99□□□□□ -0.49
DDR1-242ENST00000465966 ATP10DQ9P241 1426 aa11.99□□□□□ -0.49
DDR1-242ENST00000465966 NSD2O96028 1365 aa11.98□□□□□ -0.49
DDR1-242ENST00000465966 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
DDR1-242ENST00000465966 HSPA6P17066 643 aa11.98□□□□□ -0.49
DDR1-242ENST00000465966 MON2Q7Z3U7 1717 aa11.97□□□□□ -0.49
DDR1-242ENST00000465966 TATP17735 454 aaPredicted RBP11.97□□□□□ -0.49
DDR1-242ENST00000465966 ZNF526Q8TF50 670 aaPredicted RBP11.97□□□□□ -0.49
DDR1-242ENST00000465966 USP54Q70EL1 1684 aa11.97□□□□□ -0.49
DDR1-242ENST00000465966 AK7Q96M32 723 aa11.96□□□□□ -0.49
DDR1-242ENST00000465966 SHANK3Q9BYB0 1731 aa11.96□□□□□ -0.49
DDR1-242ENST00000465966 SMG6Q86US8 1419 aaKnown RBP11.95□□□□□ -0.5
DDR1-242ENST00000465966 QSER1Q2KHR3 1735 aa11.95□□□□□ -0.5
DDR1-242ENST00000465966 PCDH11XQ9BZA7 1347 aa11.95□□□□□ -0.5
DDR1-242ENST00000465966 PCDH11YQ9BZA8 1340 aa11.95□□□□□ -0.5
DDR1-242ENST00000465966 NBPF6Q5VWK0 638 aa11.95□□□□□ -0.5
DDR1-242ENST00000465966 MPRIPQ6WCQ1 1025 aa11.95□□□□□ -0.5
DDR1-242ENST00000465966 SMARCC1Q92922 1105 aaPredicted RBP11.95□□□□□ -0.5
DDR1-242ENST00000465966 NBPF4Q96M43 638 aa11.95□□□□□ -0.5
DDR1-242ENST00000465966 RTL1A6NKG5 1358 aa11.94□□□□□ -0.5
DDR1-242ENST00000465966 PALLDQ8WX93 1383 aa11.94□□□□□ -0.5
DDR1-242ENST00000465966 ZNF316A6NFI3 1004 aaPredicted RBP11.94□□□□□ -0.5
DDR1-242ENST00000465966 FBLN1P23142 703 aa11.94□□□□□ -0.5
DDR1-242ENST00000465966 MEGF6O75095 1541 aa11.94□□□□□ -0.5
DDR1-242ENST00000465966 LTN1O94822 1766 aa11.94□□□□□ -0.5
DDR1-242ENST00000465966 RRS1Q15050 365 aaKnown RBP11.93□□□□□ -0.5
DDR1-242ENST00000465966 USHBP1Q8N6Y0 703 aa11.93□□□□□ -0.5
DDR1-242ENST00000465966 COL24A1Q17RW2 1714 aa11.93□□□□□ -0.5
DDR1-242ENST00000465966 NSD3Q9BZ95 1437 aa11.93□□□□□ -0.5
DDR1-242ENST00000465966 IGSF1Q8N6C5 1336 aa11.92□□□□□ -0.5
DDR1-242ENST00000465966 FAM208AQ9UK61 1670 aaKnown RBP11.92□□□□□ -0.5
DDR1-242ENST00000465966 PHF14O94880 888 aa11.92□□□□□ -0.5
DDR1-242ENST00000465966 ADCY9O60503 1353 aa11.92□□□□□ -0.5
DDR1-242ENST00000465966 KAT6BQ8WYB5 2073 aa11.91□□□□□ -0.5
DDR1-242ENST00000465966 ST20-MTHFSA0A0A6YYL1 179 aa11.9□□□□□ -0.5
DDR1-242ENST00000465966 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.9□□□□□ -0.5
DDR1-242ENST00000465966 SSFA2P28290 1259 aa11.9□□□□□ -0.5
DDR1-242ENST00000465966 DOT1LQ8TEK3 1739 aa11.9□□□□□ -0.5
DDR1-242ENST00000465966 GGNBP2Q9H3C7 697 aa11.9□□□□□ -0.5
DDR1-242ENST00000465966 WWC3Q9ULE0 1092 aa11.9□□□□□ -0.5
DDR1-242ENST00000465966 LY75O60449 1722 aa11.89□□□□□ -0.51
DDR1-242ENST00000465966 FYB1O15117 783 aa11.89□□□□□ -0.51
DDR1-242ENST00000465966 CYP27B1O15528 508 aa11.89□□□□□ -0.51
DDR1-242ENST00000465966 APLP1P51693 650 aa11.89□□□□□ -0.51
DDR1-242ENST00000465966 HSP90AB2PQ58FF8 381 aa11.89□□□□□ -0.51
DDR1-242ENST00000465966 TESK2Q96S53 571 aa11.89□□□□□ -0.51
DDR1-242ENST00000465966 INSRP06213 1382 aa11.89□□□□□ -0.51
DDR1-242ENST00000465966 KIF3CO14782 793 aa11.88□□□□□ -0.51
DDR1-242ENST00000465966 PIGBQ92521 554 aa11.88□□□□□ -0.51
DDR1-242ENST00000465966 SPG7Q9UQ90 795 aa11.88□□□□□ -0.51
DDR1-242ENST00000465966 LOC102724428A0A0B4J2F2 783 aa11.87□□□□□ -0.51
DDR1-242ENST00000465966 SIK1P57059 783 aa11.87□□□□□ -0.51
DDR1-242ENST00000465966 TMF1P82094 1093 aa11.87□□□□□ -0.51
DDR1-242ENST00000465966 FLT4P35916 1363 aa11.87□□□□□ -0.51
DDR1-242ENST00000465966 KIF24Q5T7B8 1368 aa11.87□□□□□ -0.51
DDR1-242ENST00000465966 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
DDR1-242ENST00000465966 GNPATO15228 680 aa11.86□□□□□ -0.51
DDR1-242ENST00000465966 TOMM70O94826 608 aa11.86□□□□□ -0.51
DDR1-242ENST00000465966 TGFB2P61812 414 aa11.86□□□□□ -0.51
DDR1-242ENST00000465966 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
DDR1-242ENST00000465966 AMIGO3Q86WK7 504 aa11.86□□□□□ -0.51
DDR1-242ENST00000465966 TMOD3Q9NYL9 352 aa11.86□□□□□ -0.51
DDR1-242ENST00000465966 GOLGB1Q14789 3259 aaKnown RBP11.86□□□□□ -0.51
DDR1-242ENST00000465966 MMP10P09238 476 aa11.85□□□□□ -0.51
DDR1-242ENST00000465966 ATP6V1AP38606 617 aa11.85□□□□□ -0.51
DDR1-242ENST00000465966 CDCA8Q53HL2 280 aa11.85□□□□□ -0.51
DDR1-242ENST00000465966 SMIM5Q71RC9 77 aa11.85□□□□□ -0.51
DDR1-242ENST00000465966 LINC00116Q8NCU8 138 aa11.85□□□□□ -0.51
DDR1-242ENST00000465966 BCS1LQ9Y276 419 aa11.85□□□□□ -0.51
DDR1-242ENST00000465966 CEP350Q5VT06 3117 aa11.84□□□□□ -0.51
DDR1-242ENST00000465966 PPM1GO15355 546 aaPredicted RBP11.84□□□□□ -0.51
DDR1-242ENST00000465966 TRAPPC3LQ5T215 181 aa11.84□□□□□ -0.51
DDR1-242ENST00000465966 NLGN1Q8N2Q7 840 aa11.84□□□□□ -0.51
DDR1-242ENST00000465966 C5P01031 1676 aa11.84□□□□□ -0.51
DDR1-242ENST00000465966 HSPA5P11021 654 aaKnown RBP11.83□□□□□ -0.52
DDR1-242ENST00000465966 ARHGAP27Q6ZUM4 889 aa11.83□□□□□ -0.52
DDR1-242ENST00000465966 C16orf71Q8IYS4 520 aaPredicted RBP11.83□□□□□ -0.52
DDR1-242ENST00000465966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.83□□□□□ -0.52
DDR1-242ENST00000465966 ASAP1Q9ULH1 1129 aa11.83□□□□□ -0.52
DDR1-242ENST00000465966 RTCBQ9Y3I0 505 aaKnown RBP11.83□□□□□ -0.52
DDR1-242ENST00000465966 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms