RNA–Protein interactions for RNA: ENST00000463709.1

TM9SF2-202, Transcript of transmembrane 9 superfamily member 2, humanhuman

TSL 3

Gene TM9SF2, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-202ENST00000463709 CDCA8Q53HL2 280 aa9.26□□□□□ -0.93
TM9SF2-202ENST00000463709 CCDC85AQ96PX6 553 aaPredicted RBP9.26□□□□□ -0.93
TM9SF2-202ENST00000463709 PPP1R12CQ9BZL4 782 aa9.26□□□□□ -0.93
TM9SF2-202ENST00000463709 SERPINA10Q9UK55 444 aa9.26□□□□□ -0.93
TM9SF2-202ENST00000463709 LMOD1P29536 600 aaPredicted RBP9.25□□□□□ -0.93
TM9SF2-202ENST00000463709 INTS6LQ5JSJ4 861 aaKnown RBP9.25□□□□□ -0.93
TM9SF2-202ENST00000463709 CCDC116Q8IYX3 515 aa9.25□□□□□ -0.93
TM9SF2-202ENST00000463709 PHTF2Q8N3S3 785 aa9.25□□□□□ -0.93
TM9SF2-202ENST00000463709 EMILIN1Q9Y6C2 1016 aa9.25□□□□□ -0.93
TM9SF2-202ENST00000463709 SOS2Q07890 1332 aaPredicted RBP9.25□□□□□ -0.93
TM9SF2-202ENST00000463709 NBPF20Q3BBV1 942 aa9.24□□□□□ -0.93
TM9SF2-202ENST00000463709 CFAP70Q5T0N1 1121 aa9.24□□□□□ -0.93
TM9SF2-202ENST00000463709 CDCA7Q9BWT1 371 aaPredicted RBP9.24□□□□□ -0.93
TM9SF2-202ENST00000463709 PPFIA3O75145 1194 aa9.23□□□□□ -0.93
TM9SF2-202ENST00000463709 TSEN34Q9BSV6 310 aaKnown RBP9.23□□□□□ -0.93
TM9SF2-202ENST00000463709 TMPRSS4Q9NRS4 437 aa9.23□□□□□ -0.93
TM9SF2-202ENST00000463709 DNMT3LQ9UJW3 386 aa9.23□□□□□ -0.93
TM9SF2-202ENST00000463709 PCDHB11Q9Y5F2 797 aa9.23□□□□□ -0.93
TM9SF2-202ENST00000463709 ESPNB1AK53 854 aa9.22□□□□□ -0.93
TM9SF2-202ENST00000463709 ERVH48-1M5A8F1 160 aa9.22□□□□□ -0.93
TM9SF2-202ENST00000463709 ATP9BO43861 1147 aa9.22□□□□□ -0.93
TM9SF2-202ENST00000463709 MCCD1P59942 119 aaPredicted RBP9.22□□□□□ -0.93
TM9SF2-202ENST00000463709 PLPP7Q8NBV4 271 aa9.22□□□□□ -0.93
TM9SF2-202ENST00000463709 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.21□□□□□ -0.94
TM9SF2-202ENST00000463709 OXLD1Q5BKU9 147 aa9.21□□□□□ -0.94
TM9SF2-202ENST00000463709 MAFBQ9Y5Q3 323 aaPredicted RBP9.21□□□□□ -0.94
TM9SF2-202ENST00000463709 USP17L5A8MUK1 530 aa9.2□□□□□ -0.94
TM9SF2-202ENST00000463709 NCOA4Q13772 614 aa9.2□□□□□ -0.94
TM9SF2-202ENST00000463709 CDV3Q9UKY7 258 aaKnown RBP9.2□□□□□ -0.94
TM9SF2-202ENST00000463709 DOLKQ9UPQ8 538 aa9.2□□□□□ -0.94
TM9SF2-202ENST00000463709 USP17L3A6NCW0 530 aa9.19□□□□□ -0.94
TM9SF2-202ENST00000463709 USP17L4A6NCW7 530 aa9.19□□□□□ -0.94
TM9SF2-202ENST00000463709 SCTRP47872 440 aa9.19□□□□□ -0.94
TM9SF2-202ENST00000463709 PPP1R26Q5T8A7 1209 aaPredicted RBP9.19□□□□□ -0.94
TM9SF2-202ENST00000463709 USP17L2Q6R6M4 530 aa9.19□□□□□ -0.94
TM9SF2-202ENST00000463709 USP17L1Q7RTZ2 530 aa9.19□□□□□ -0.94
TM9SF2-202ENST00000463709 ZNF592Q92610 1267 aa9.19□□□□□ -0.94
TM9SF2-202ENST00000463709 CYLDQ9NQC7 956 aa9.19□□□□□ -0.94
TM9SF2-202ENST00000463709 TTLL8A6PVC2 850 aa9.18□□□□□ -0.94
TM9SF2-202ENST00000463709 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.18□□□□□ -0.943e-6■■■■□ 23.9
TM9SF2-202ENST00000463709 PGPEP1Q9NXJ5 209 aa9.18□□□□□ -0.94
TM9SF2-202ENST00000463709 CBLBQ13191 982 aa9.17□□□□□ -0.94
TM9SF2-202ENST00000463709 RNF20Q5VTR2 975 aa9.17□□□□□ -0.94
TM9SF2-202ENST00000463709 Q6ZVU0 165 aa9.17□□□□□ -0.94
TM9SF2-202ENST00000463709 ZNF784Q8NCA9 323 aaPredicted RBP9.17□□□□□ -0.94
TM9SF2-202ENST00000463709 NFATC2IPQ8NCF5 419 aa9.16□□□□□ -0.94
TM9SF2-202ENST00000463709 CHIC2Q9UKJ5 165 aa9.16□□□□□ -0.94
TM9SF2-202ENST00000463709 SPINT1O43278 529 aa9.15□□□□□ -0.94
TM9SF2-202ENST00000463709 MKRN1Q9UHC7 482 aaKnown RBP9.15□□□□□ -0.94
TM9SF2-202ENST00000463709 STAU1O95793 577 aaKnown RBP9.14□□□□□ -0.95
TM9SF2-202ENST00000463709 PTSQ03393 145 aa9.14□□□□□ -0.95
TM9SF2-202ENST00000463709 DHX9Q08211 1270 aaKnown RBP9.14□□□□□ -0.95
TM9SF2-202ENST00000463709 KANK4Q5T7N3 995 aaPredicted RBP9.14□□□□□ -0.95
TM9SF2-202ENST00000463709 SEPT12Q8IYM1 358 aa9.14□□□□□ -0.95
TM9SF2-202ENST00000463709 FIGNL2A6NMB9 653 aa9.13□□□□□ -0.95
TM9SF2-202ENST00000463709 ADD1P35611 737 aaKnown RBP9.13□□□□□ -0.95
TM9SF2-202ENST00000463709 EML3Q32P44 896 aa9.13□□□□□ -0.95
TM9SF2-202ENST00000463709 MAP7D1Q3KQU3 841 aa9.13□□□□□ -0.95
TM9SF2-202ENST00000463709 LILRA1O75019 489 aa9.12□□□□□ -0.95
TM9SF2-202ENST00000463709 SRPK2P78362 688 aaKnown RBP9.12□□□□□ -0.95
TM9SF2-202ENST00000463709 KRT76Q01546 638 aa9.12□□□□□ -0.95
TM9SF2-202ENST00000463709 PLEKHM2Q8IWE5 1019 aa9.12□□□□□ -0.95
TM9SF2-202ENST00000463709 GPR161Q8N6U8 529 aaKnown RBP9.12□□□□□ -0.95
TM9SF2-202ENST00000463709 VRTNQ9H8Y1 702 aa9.12□□□□□ -0.95
TM9SF2-202ENST00000463709 ZNF594Q96JF6 807 aaPredicted RBP9.11□□□□□ -0.95
TM9SF2-202ENST00000463709 AGBL1Q96MI9 1066 aa9.11□□□□□ -0.95
TM9SF2-202ENST00000463709 CARNS1A5YM72 827 aa9.1□□□□□ -0.95
TM9SF2-202ENST00000463709 RASA1P20936 1047 aa9.1□□□□□ -0.95
TM9SF2-202ENST00000463709 CRTC2Q53ET0 693 aaPredicted RBP9.1□□□□□ -0.95
TM9SF2-202ENST00000463709 CC2D2BQ6DHV5 1058 aa9.1□□□□□ -0.95
TM9SF2-202ENST00000463709 CCDC155Q8N6L0 562 aa9.1□□□□□ -0.95
TM9SF2-202ENST00000463709 NANOS1Q8WY41 292 aaKnown RBP9.1□□□□□ -0.95
TM9SF2-202ENST00000463709 PBXIP1Q96AQ6 731 aa9.1□□□□□ -0.95
TM9SF2-202ENST00000463709 OSBPL3Q9H4L5 887 aa9.1□□□□□ -0.95
TM9SF2-202ENST00000463709 ESF1Q9H501 851 aaKnown RBP9.1□□□□□ -0.95
TM9SF2-202ENST00000463709 KIAA1024Q9UPX6 916 aa9.1□□□□□ -0.95
TM9SF2-202ENST00000463709 NOD1Q9Y239 953 aa9.1□□□□□ -0.95
TM9SF2-202ENST00000463709 MYCP01106 439 aaPredicted RBP9.09□□□□□ -0.95
TM9SF2-202ENST00000463709 ERVK-9P63128 1117 aa9.09□□□□□ -0.95
TM9SF2-202ENST00000463709 GTF2IP78347 998 aa9.09□□□□□ -0.95
TM9SF2-202ENST00000463709 CLDN10P78369 228 aa9.09□□□□□ -0.95
TM9SF2-202ENST00000463709 PSME1Q06323 249 aa9.09□□□□□ -0.95
TM9SF2-202ENST00000463709 USP4Q13107 963 aa9.09□□□□□ -0.95
TM9SF2-202ENST00000463709 SLC35F4A4IF30 521 aa9.08□□□□□ -0.96
TM9SF2-202ENST00000463709 LGR5O75473 907 aa9.08□□□□□ -0.96
TM9SF2-202ENST00000463709 OGFOD1Q8N543 542 aa9.08□□□□□ -0.96
TM9SF2-202ENST00000463709 CNTNAP3BQ96NU0 1288 aa9.08□□□□□ -0.96
TM9SF2-202ENST00000463709 CNTNAP3Q9BZ76 1288 aa9.08□□□□□ -0.96
TM9SF2-202ENST00000463709 CTSOP43234 321 aaPredicted RBP9.07□□□□□ -0.96
TM9SF2-202ENST00000463709 RELBQ01201 579 aa9.07□□□□□ -0.96
TM9SF2-202ENST00000463709 KCNMA1Q12791 1236 aa9.07□□□□□ -0.96
TM9SF2-202ENST00000463709 RAB6BQ9NRW1 208 aa9.07□□□□□ -0.96
TM9SF2-202ENST00000463709 PCDHGA11Q9Y5H2 935 aa9.07□□□□□ -0.96
TM9SF2-202ENST00000463709 ZBTB7BO15156 539 aaPredicted RBP9.06□□□□□ -0.96
TM9SF2-202ENST00000463709 LARP1Q6PKG0 1096 aaKnown RBP9.06□□□□□ -0.96
TM9SF2-202ENST00000463709 INSM2Q96T92 566 aaPredicted RBP9.06□□□□□ -0.96
TM9SF2-202ENST00000463709 COL25A1Q9BXS0 654 aaPredicted RBP9.06□□□□□ -0.96
TM9SF2-202ENST00000463709 ZNF395Q9H8N7 513 aaPredicted RBP9.06□□□□□ -0.96
TM9SF2-202ENST00000463709 DNAAF2Q9NVR5 837 aaKnown RBP9.06□□□□□ -0.96
TM9SF2-202ENST00000463709 USP17L15C9J2P7 530 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms