RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 ZCRB1Q8TBF4 217 aaKnown RBP27.14■■□□□ 1.94
NUP43-205ENST00000463048 NUDCQ9Y266 331 aa27.14■■□□□ 1.94
NUP43-205ENST00000463048 OVOS2A0A0G2JMS6 1433 aa27.14■■□□□ 1.93
NUP43-205ENST00000463048 U2AF1L5P0DN76 240 aaPredicted RBP27.13■■□□□ 1.93
NUP43-205ENST00000463048 U2AF1Q01081 240 aaKnown RBP eCLIP27.13■■□□□ 1.93
NUP43-205ENST00000463048 MARCH10Q8NA82 808 aaPredicted RBP27.13■■□□□ 1.93
NUP43-205ENST00000463048 SHANK3Q9BYB0 1731 aa27.08■■□□□ 1.93
NUP43-205ENST00000463048 CCDC184Q52MB2 194 aa27.08■■□□□ 1.93
NUP43-205ENST00000463048 SPG7Q9UQ90 795 aa27.07■■□□□ 1.92
NUP43-205ENST00000463048 KDRP35968 1356 aa27.07■■□□□ 1.92
NUP43-205ENST00000463048 DIEXFQ68CQ4 756 aaKnown RBP27.06■■□□□ 1.92
NUP43-205ENST00000463048 PKD1L3Q7Z443 1732 aa27.04■■□□□ 1.92
NUP43-205ENST00000463048 PLEKHO1Q53GL0 409 aaPredicted RBP27.04■■□□□ 1.92
NUP43-205ENST00000463048 FAM196AQ6ZSG2 479 aa27.04■■□□□ 1.92
NUP43-205ENST00000463048 PRKAR2BP31323 418 aa27.03■■□□□ 1.92
NUP43-205ENST00000463048 ACSBG1Q96GR2 724 aa27.03■■□□□ 1.92
NUP43-205ENST00000463048 PCDH11XQ9BZA7 1347 aa27.03■■□□□ 1.92
NUP43-205ENST00000463048 PCDH11YQ9BZA8 1340 aa27.03■■□□□ 1.92
NUP43-205ENST00000463048 CYP27B1O15528 508 aa27.02■■□□□ 1.92
NUP43-205ENST00000463048 RSPH6AQ9H0K4 717 aa27.02■■□□□ 1.92
NUP43-205ENST00000463048 TRIM37O94972 964 aa27.01■■□□□ 1.91
NUP43-205ENST00000463048 WDR43Q15061 677 aaKnown RBP eCLIP27.01■■□□□ 1.91
NUP43-205ENST00000463048 ZNF530Q6P9A1 599 aaPredicted RBP27.01■■□□□ 1.91
NUP43-205ENST00000463048 MRS2Q9HD23 443 aa27■■□□□ 1.91
NUP43-205ENST00000463048 UPF1Q92900 1129 aaKnown RBP eCLIP26.99■■□□□ 1.91
NUP43-205ENST00000463048 AMOTQ4VCS5 1084 aa26.98■■□□□ 1.91
NUP43-205ENST00000463048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.98■■□□□ 1.911e-8■□□□□ 8.1
NUP43-205ENST00000463048 EP400Q96L91 3159 aa26.97■■□□□ 1.91
NUP43-205ENST00000463048 SOCS7O14512 581 aa26.97■■□□□ 1.91
NUP43-205ENST00000463048 PTF1AQ7RTS3 328 aa26.97■■□□□ 1.91
NUP43-205ENST00000463048 PHACTR3Q96KR7 559 aa26.97■■□□□ 1.91
NUP43-205ENST00000463048 FCHSD2O94868 740 aa26.96■■□□□ 1.91
NUP43-205ENST00000463048 PHKG2P15735 406 aa26.96■■□□□ 1.91
NUP43-205ENST00000463048 MTHFSDQ2M296 383 aaKnown RBP26.96■■□□□ 1.91
NUP43-205ENST00000463048 IFNL2Q8IZJ0 200 aa26.96■■□□□ 1.91
NUP43-205ENST00000463048 SYTL4Q96C24 671 aaPredicted RBP26.96■■□□□ 1.91
NUP43-205ENST00000463048 KAT6BQ8WYB5 2073 aa26.96■■□□□ 1.91
NUP43-205ENST00000463048 KCNQ2O43526 872 aa26.95■■□□□ 1.9
NUP43-205ENST00000463048 C1orf141Q5JVX7 400 aa26.95■■□□□ 1.9
NUP43-205ENST00000463048 DOT1LQ8TEK3 1739 aa26.94■■□□□ 1.9
NUP43-205ENST00000463048 CCDC146Q8IYE0 955 aa26.94■■□□□ 1.9
NUP43-205ENST00000463048 SBF2Q86WG5 1849 aa26.94■■□□□ 1.9
NUP43-205ENST00000463048 ADAMTS8Q9UP79 889 aa26.93■■□□□ 1.9
NUP43-205ENST00000463048 SF3B2Q13435 895 aaKnown RBP26.92■■□□□ 1.9
NUP43-205ENST00000463048 PRIM1P49642 420 aaKnown RBP26.91■■□□□ 1.9
NUP43-205ENST00000463048 MPRIPQ6WCQ1 1025 aa26.91■■□□□ 1.9
NUP43-205ENST00000463048 NEFMP07197 916 aa26.9■■□□□ 1.9
NUP43-205ENST00000463048 PLEKHG2Q9H7P9 1386 aa26.89■■□□□ 1.9
NUP43-205ENST00000463048 TOGARAM1Q9Y4F4 1720 aa26.89■■□□□ 1.9
NUP43-205ENST00000463048 MAPK8IP3Q9UPT6 1336 aa26.89■■□□□ 1.89
NUP43-205ENST00000463048 TNS1Q9HBL0 1735 aaKnown RBP26.88■■□□□ 1.89
NUP43-205ENST00000463048 APBA3O96018 575 aa26.88■■□□□ 1.89
NUP43-205ENST00000463048 MIER1Q8N108 512 aa26.88■■□□□ 1.89
NUP43-205ENST00000463048 PLEKHF1Q96S99 279 aa26.88■■□□□ 1.89
NUP43-205ENST00000463048 BCL9O00512 1426 aa26.88■■□□□ 1.89
NUP43-205ENST00000463048 NHSQ6T4R5 1651 aa26.88■■□□□ 1.89
NUP43-205ENST00000463048 NKX1-1Q15270 411 aaPredicted RBP26.87■■□□□ 1.89
NUP43-205ENST00000463048 AKAP4Q5JQC9 854 aa26.87■■□□□ 1.89
NUP43-205ENST00000463048 DEFB132Q7Z7B7 95 aa26.87■■□□□ 1.89
NUP43-205ENST00000463048 GAS2L2Q8NHY3 880 aa26.87■■□□□ 1.89
NUP43-205ENST00000463048 BCL11BQ9C0K0 894 aaPredicted RBP26.87■■□□□ 1.89
NUP43-205ENST00000463048 PNNQ9H307 717 aaKnown RBP26.86■■□□□ 1.89
NUP43-205ENST00000463048 KDM6AO15550 1401 aaPredicted RBP26.85■■□□□ 1.89
NUP43-205ENST00000463048 HSP90AB1P08238 724 aaKnown RBP26.85■■□□□ 1.89
NUP43-205ENST00000463048 SENP3-EIF4A1A0A087X0R7 540 aa26.84■■□□□ 1.89
NUP43-205ENST00000463048 CCDC125Q86Z20 511 aa26.84■■□□□ 1.89
NUP43-205ENST00000463048 FAM9BQ8IZU0 186 aa26.84■■□□□ 1.89
NUP43-205ENST00000463048 PNISRQ8TF01 805 aaKnown RBP26.84■■□□□ 1.89
NUP43-205ENST00000463048 DCAF5Q96JK2 942 aa26.84■■□□□ 1.89
NUP43-205ENST00000463048 LGR6Q9HBX8 967 aa26.84■■□□□ 1.89
NUP43-205ENST00000463048 EN1Q05925 392 aaPredicted RBP26.83■■□□□ 1.89
NUP43-205ENST00000463048 MAP3K5Q99683 1374 aa26.83■■□□□ 1.88
NUP43-205ENST00000463048 BTAF1O14981 1849 aa26.82■■□□□ 1.88
NUP43-205ENST00000463048 GNAT3A8MTJ3 354 aa26.82■■□□□ 1.88
NUP43-205ENST00000463048 RRP7AQ9Y3A4 280 aaKnown RBP26.82■■□□□ 1.88
NUP43-205ENST00000463048 ITGB4P16144 1822 aa26.81■■□□□ 1.88
NUP43-205ENST00000463048 BAG6P46379 1132 aa26.81■■□□□ 1.88
NUP43-205ENST00000463048 RUNDC1Q96C34 613 aa26.81■■□□□ 1.88
NUP43-205ENST00000463048 RNMTO43148 476 aaKnown RBP26.8■■□□□ 1.88
NUP43-205ENST00000463048 NEUROD2Q15784 382 aa26.8■■□□□ 1.88
NUP43-205ENST00000463048 TMOD3Q9NYL9 352 aa26.8■■□□□ 1.88
NUP43-205ENST00000463048 VIRMAQ69YN4 1812 aaKnown RBP26.79■■□□□ 1.88
NUP43-205ENST00000463048 CABP4P57796 275 aa26.79■■□□□ 1.88
NUP43-205ENST00000463048 NFE2L2Q16236 605 aa26.79■■□□□ 1.88
NUP43-205ENST00000463048 DCTN1Q14203 1278 aa26.78■■□□□ 1.88
NUP43-205ENST00000463048 PIGBQ92521 554 aa26.78■■□□□ 1.88
NUP43-205ENST00000463048 SCN11AQ9UI33 1791 aa26.78■■□□□ 1.88
NUP43-205ENST00000463048 EZH2Q15910 746 aaKnown RBP26.77■■□□□ 1.88
NUP43-205ENST00000463048 MCM10Q7L590 875 aa26.77■■□□□ 1.88
NUP43-205ENST00000463048 DLG5Q8TDM6 1919 aa26.77■■□□□ 1.88
NUP43-205ENST00000463048 NFATC2IPQ8NCF5 419 aa26.76■■□□□ 1.87
NUP43-205ENST00000463048 IL17REQ8NFR9 667 aa26.76■■□□□ 1.87
NUP43-205ENST00000463048 RTF1Q92541 710 aaKnown RBP26.76■■□□□ 1.87
NUP43-205ENST00000463048 ERVV-2B6SEH9 535 aa26.75■■□□□ 1.87
NUP43-205ENST00000463048 CCER2I3L3R5 266 aa26.74■■□□□ 1.87
NUP43-205ENST00000463048 TMPOP42166 694 aaKnown RBP26.74■■□□□ 1.87
NUP43-205ENST00000463048 RIPK4P57078 832 aa26.74■■□□□ 1.87
NUP43-205ENST00000463048 APAF1O14727 1248 aa26.73■■□□□ 1.87
NUP43-205ENST00000463048 THUMPD2Q9BTF0 503 aaKnown RBP26.72■■□□□ 1.87
NUP43-205ENST00000463048 SLC52A2Q9HAB3 445 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms