RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 SIGLEC1Q9BZZ2 1709 aa5.5□□□□□ -1.53
ERCC4-203ENST00000462862 ABCC11Q96J66 1382 aa5.5□□□□□ -1.53
ERCC4-203ENST00000462862 A2ML1A8K2U0 1454 aa5.5□□□□□ -1.53
ERCC4-203ENST00000462862 TECPR2O15040 1411 aa5.49□□□□□ -1.53
ERCC4-203ENST00000462862 YTHDC2Q9H6S0 1430 aaKnown RBP5.49□□□□□ -1.53
ERCC4-203ENST00000462862 NBPF26B4DH59 902 aa5.49□□□□□ -1.53
ERCC4-203ENST00000462862 TSHZ2Q9NRE2 1034 aa5.49□□□□□ -1.53
ERCC4-203ENST00000462862 NUDCQ9Y266 331 aa5.49□□□□□ -1.53
ERCC4-203ENST00000462862 SUPT16HQ9Y5B9 1047 aaKnown RBP5.49□□□□□ -1.53
ERCC4-203ENST00000462862 POLR3AO14802 1390 aaPredicted RBP5.49□□□□□ -1.53
ERCC4-203ENST00000462862 ZMYM3Q14202 1370 aa5.49□□□□□ -1.53
ERCC4-203ENST00000462862 TNRQ92752 1358 aa5.49□□□□□ -1.53
ERCC4-203ENST00000462862 DIP2AQ14689 1571 aa5.49□□□□□ -1.53
ERCC4-203ENST00000462862 MYOM1P52179 1685 aa5.49□□□□□ -1.53
ERCC4-203ENST00000462862 CLTCQ00610 1675 aaKnown RBP5.49□□□□□ -1.53
ERCC4-203ENST00000462862 QRICH2Q9H0J4 1663 aa5.49□□□□□ -1.53
ERCC4-203ENST00000462862 RIMS2Q9UQ26 1411 aa5.48□□□□□ -1.53
ERCC4-203ENST00000462862 ARHGEF28Q8N1W1 1705 aaKnown RBP5.48□□□□□ -1.53
ERCC4-203ENST00000462862 ATP7BP35670 1465 aa5.48□□□□□ -1.53
ERCC4-203ENST00000462862 FAM9BQ8IZU0 186 aa5.48□□□□□ -1.53
ERCC4-203ENST00000462862 TERF2IPQ9NYB0 399 aa5.48□□□□□ -1.53
ERCC4-203ENST00000462862 KNDC1Q76NI1 1749 aa5.48□□□□□ -1.53
ERCC4-203ENST00000462862 ALKQ9UM73 1620 aa5.48□□□□□ -1.53
ERCC4-203ENST00000462862 PTPRMP28827 1452 aa5.47□□□□□ -1.53
ERCC4-203ENST00000462862 PIK3R4Q99570 1358 aa5.47□□□□□ -1.53
ERCC4-203ENST00000462862 TMEM2Q9UHN6 1383 aa5.47□□□□□ -1.53
ERCC4-203ENST00000462862 PLEKHG1Q9ULL1 1385 aa5.47□□□□□ -1.53
ERCC4-203ENST00000462862 WDR43Q15061 677 aaKnown RBP eCLIP5.47□□□□□ -1.53
ERCC4-203ENST00000462862 CFAP53Q96M91 514 aa5.47□□□□□ -1.53
ERCC4-203ENST00000462862 PNNQ9H307 717 aaKnown RBP5.47□□□□□ -1.53
ERCC4-203ENST00000462862 NPDC1Q9NQX5 325 aaPredicted RBP5.47□□□□□ -1.53
ERCC4-203ENST00000462862 RBM27Q9P2N5 1060 aaKnown RBP5.47□□□□□ -1.53
ERCC4-203ENST00000462862 SLIT1O75093 1534 aa5.47□□□□□ -1.53
ERCC4-203ENST00000462862 CPS1P31327 1500 aa5.47□□□□□ -1.53
ERCC4-203ENST00000462862 TSPOAP1O95153 1857 aa5.47□□□□□ -1.53
ERCC4-203ENST00000462862 RNF123Q5XPI4 1314 aa5.47□□□□□ -1.53
ERCC4-203ENST00000462862 TJAP1Q5JTD0 557 aa5.46□□□□□ -1.54
ERCC4-203ENST00000462862 PADI6Q6TGC4 694 aa5.46□□□□□ -1.54
ERCC4-203ENST00000462862 HDGFL2Q7Z4V5 671 aaPredicted RBP5.46□□□□□ -1.54
ERCC4-203ENST00000462862 ARHGEF1Q92888 912 aaKnown RBP5.46□□□□□ -1.54
ERCC4-203ENST00000462862 ADGRB2O60241 1585 aa5.46□□□□□ -1.54
ERCC4-203ENST00000462862 ARHGAP23Q9P227 1491 aa5.45□□□□□ -1.54
ERCC4-203ENST00000462862 TULP4Q9NRJ4 1543 aa5.45□□□□□ -1.54
ERCC4-203ENST00000462862 RNF40O75150 1001 aa5.45□□□□□ -1.54
ERCC4-203ENST00000462862 PPP2R1AP30153 589 aa5.45□□□□□ -1.54
ERCC4-203ENST00000462862 MLLT3P42568 568 aaPredicted RBP5.45□□□□□ -1.54
ERCC4-203ENST00000462862 TTC13Q8NBP0 860 aa5.45□□□□□ -1.54
ERCC4-203ENST00000462862 POGKQ9P215 609 aa5.45□□□□□ -1.54
ERCC4-203ENST00000462862 TRAK1Q9UPV9 953 aa5.45□□□□□ -1.54
ERCC4-203ENST00000462862 EID1Q9Y6B2 187 aa5.45□□□□□ -1.54
ERCC4-203ENST00000462862 PTCH1Q13635 1447 aa5.45□□□□□ -1.54
ERCC4-203ENST00000462862 NSD3Q9BZ95 1437 aa5.45□□□□□ -1.54
ERCC4-203ENST00000462862 AAMPQ13685 434 aa5.44□□□□□ -1.54
ERCC4-203ENST00000462862 SWT1Q5T5J6 900 aaKnown RBP5.44□□□□□ -1.54
ERCC4-203ENST00000462862 THEMISQ8N1K5 641 aaPredicted RBP5.44□□□□□ -1.54
ERCC4-203ENST00000462862 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.44□□□□□ -1.54
ERCC4-203ENST00000462862 KCNV2Q8TDN2 545 aa5.44□□□□□ -1.54
ERCC4-203ENST00000462862 MTRQ99707 1265 aa5.44□□□□□ -1.54
ERCC4-203ENST00000462862 PPP4R2Q9NY27 417 aa5.44□□□□□ -1.54
ERCC4-203ENST00000462862 SETD1AO15047 1707 aaKnown RBP5.43□□□□□ -1.54
ERCC4-203ENST00000462862 CDC42BPGQ6DT37 1551 aa5.43□□□□□ -1.54
ERCC4-203ENST00000462862 EDC4Q6P2E9 1401 aaKnown RBP5.43□□□□□ -1.54
ERCC4-203ENST00000462862 CT47B1P0C2W7 299 aaPredicted RBP5.43□□□□□ -1.54
ERCC4-203ENST00000462862 APLP1P51693 650 aa5.43□□□□□ -1.54
ERCC4-203ENST00000462862 CCDC27Q2M243 656 aa5.43□□□□□ -1.54
ERCC4-203ENST00000462862 CC2D1BQ5T0F9 858 aaKnown RBP5.43□□□□□ -1.54
ERCC4-203ENST00000462862 MORC1Q86VD1 984 aa5.43□□□□□ -1.54
ERCC4-203ENST00000462862 IL21Q9HBE4 155 aa5.43□□□□□ -1.54
ERCC4-203ENST00000462862 UBR1Q8IWV7 1749 aa5.43□□□□□ -1.54
ERCC4-203ENST00000462862 CCDC184Q52MB2 194 aa5.42□□□□□ -1.54
ERCC4-203ENST00000462862 FBXO31Q5XUX0 539 aaPredicted RBP5.42□□□□□ -1.54
ERCC4-203ENST00000462862 ZNF516Q92618 1163 aa5.42□□□□□ -1.54
ERCC4-203ENST00000462862 EYA1Q99502 592 aa5.42□□□□□ -1.54
ERCC4-203ENST00000462862 TBX22Q9Y458 520 aa5.42□□□□□ -1.54
ERCC4-203ENST00000462862 AATKQ6ZMQ8 1374 aa5.42□□□□□ -1.54
ERCC4-203ENST00000462862 NRXN3Q9Y4C0 1643 aa5.41□□□□□ -1.54
ERCC4-203ENST00000462862 ANKARQ7Z5J8 1434 aa5.41□□□□□ -1.54
ERCC4-203ENST00000462862 ANKRD26Q9UPS8 1709 aa5.41□□□□□ -1.54
ERCC4-203ENST00000462862 E9PSI1 815 aa5.41□□□□□ -1.54
ERCC4-203ENST00000462862 SRPK2P78362 688 aaKnown RBP5.41□□□□□ -1.54
ERCC4-203ENST00000462862 PPP1R18Q6NYC8 613 aa5.41□□□□□ -1.54
ERCC4-203ENST00000462862 SLF2Q8IX21 1173 aa5.41□□□□□ -1.54
ERCC4-203ENST00000462862 NECTIN2Q92692 538 aa5.41□□□□□ -1.54
ERCC4-203ENST00000462862 PRAM1Q96QH2 718 aa5.41□□□□□ -1.54
ERCC4-203ENST00000462862 CARD14Q9BXL6 1004 aa5.41□□□□□ -1.54
ERCC4-203ENST00000462862 LRRC7Q96NW7 1537 aa5.41□□□□□ -1.54
ERCC4-203ENST00000462862 ZNF521Q96K83 1311 aa5.41□□□□□ -1.54
ERCC4-203ENST00000462862 MYO5BQ9ULV0 1848 aa5.41□□□□□ -1.54
ERCC4-203ENST00000462862 A0A1W2PP64 1363 aa5.41□□□□□ -1.54
ERCC4-203ENST00000462862 CFAP65Q6ZU64 1925 aaKnown RBP5.4□□□□□ -1.54
ERCC4-203ENST00000462862 CPSF1Q10570 1443 aaKnown RBP5.4□□□□□ -1.54
ERCC4-203ENST00000462862 FER1L4A9Z1Z3 1794 aa5.4□□□□□ -1.54
ERCC4-203ENST00000462862 WASLO00401 505 aaPredicted RBP5.4□□□□□ -1.54
ERCC4-203ENST00000462862 NEFMP07197 916 aa5.4□□□□□ -1.54
ERCC4-203ENST00000462862 SLC4A3P48751 1232 aa5.4□□□□□ -1.54
ERCC4-203ENST00000462862 PTGDRQ13258 359 aa5.4□□□□□ -1.54
ERCC4-203ENST00000462862 TMEM132EQ6IEE7 984 aa5.4□□□□□ -1.54
ERCC4-203ENST00000462862 Q6ZNB5 142 aa5.4□□□□□ -1.54
ERCC4-203ENST00000462862 WDR63Q8IWG1 891 aa5.4□□□□□ -1.54
ERCC4-203ENST00000462862 RCAN3Q9UKA8 241 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms