RNA–Protein interactions for RNA: ENST00000462616.1

PMPCA-205, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 3,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-205ENST00000462616 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
PMPCA-205ENST00000462616 FER1L4A9Z1Z3 1794 aa16.18■□□□□ 0.18
PMPCA-205ENST00000462616 IDI1Q13907 227 aa16.18■□□□□ 0.18
PMPCA-205ENST00000462616 RRS1Q15050 365 aaKnown RBP16.18■□□□□ 0.18
PMPCA-205ENST00000462616 ZDHHC9Q9Y397 364 aa16.18■□□□□ 0.18
PMPCA-205ENST00000462616 NPATQ14207 1427 aa16.18■□□□□ 0.18
PMPCA-205ENST00000462616 SOX12O15370 315 aa16.17■□□□□ 0.18
PMPCA-205ENST00000462616 ZNF830Q96NB3 372 aaPredicted RBP16.17■□□□□ 0.18
PMPCA-205ENST00000462616 DCTPP1Q9H773 170 aa16.17■□□□□ 0.18
PMPCA-205ENST00000462616 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.17■□□□□ 0.18
PMPCA-205ENST00000462616 ARHGAP45Q92619 1136 aa16.17■□□□□ 0.18
PMPCA-205ENST00000462616 JARID2Q92833 1246 aaPredicted RBP16.17■□□□□ 0.18
PMPCA-205ENST00000462616 ZKSCAN5Q9Y2L8 839 aa16.17■□□□□ 0.18
PMPCA-205ENST00000462616 TSC1Q92574 1164 aa16.16■□□□□ 0.18
PMPCA-205ENST00000462616 CWC22Q9HCG8 908 aaKnown RBP16.16■□□□□ 0.18
PMPCA-205ENST00000462616 REC8O95072 547 aa16.16■□□□□ 0.18
PMPCA-205ENST00000462616 LRSAM1Q6UWE0 723 aa16.16■□□□□ 0.18
PMPCA-205ENST00000462616 CLEC17AQ6ZS10 378 aa16.16■□□□□ 0.18
PMPCA-205ENST00000462616 RILPL2Q969X0 211 aa16.16■□□□□ 0.18
PMPCA-205ENST00000462616 ZNF428Q96B54 188 aa16.16■□□□□ 0.18
PMPCA-205ENST00000462616 TULP4Q9NRJ4 1543 aa16.15■□□□□ 0.18
PMPCA-205ENST00000462616 WAPLQ7Z5K2 1190 aa16.15■□□□□ 0.18
PMPCA-205ENST00000462616 MEIS3Q99687 375 aa16.15■□□□□ 0.18
PMPCA-205ENST00000462616 ABCC4O15439 1325 aa16.15■□□□□ 0.18
PMPCA-205ENST00000462616 TRIM6-TRIM34B2RNG4 842 aa16.15■□□□□ 0.18
PMPCA-205ENST00000462616 IFT57Q9NWB7 429 aa16.15■□□□□ 0.18
PMPCA-205ENST00000462616 RPGRIP1LQ68CZ1 1315 aa16.15■□□□□ 0.18
PMPCA-205ENST00000462616 UPF3BQ9BZI7 483 aaKnown RBP16.14■□□□□ 0.17
PMPCA-205ENST00000462616 MIS18AQ9NYP9 233 aa16.14■□□□□ 0.17
PMPCA-205ENST00000462616 ADGRB2O60241 1585 aa16.14■□□□□ 0.17
PMPCA-205ENST00000462616 FAM177BA6PVY3 158 aa16.14■□□□□ 0.17
PMPCA-205ENST00000462616 DTNBO60941 627 aa16.14■□□□□ 0.17
PMPCA-205ENST00000462616 CCDC39Q9UFE4 941 aa16.14■□□□□ 0.17
PMPCA-205ENST00000462616 A0A0U1RQG5 324 aaPredicted RBP16.14■□□□□ 0.17
PMPCA-205ENST00000462616 CYP2E1P05181 493 aaPredicted RBP16.14■□□□□ 0.17
PMPCA-205ENST00000462616 NME9Q86XW9 330 aa16.14■□□□□ 0.17
PMPCA-205ENST00000462616 TMX3Q96JJ7 454 aa16.14■□□□□ 0.17
PMPCA-205ENST00000462616 ANO2Q9NQ90 1003 aa16.14■□□□□ 0.17
PMPCA-205ENST00000462616 ERC2O15083 957 aa16.13■□□□□ 0.17
PMPCA-205ENST00000462616 IBTKQ9P2D0 1353 aaPredicted RBP16.13■□□□□ 0.17
PMPCA-205ENST00000462616 EXOC6BQ9Y2D4 811 aa16.13■□□□□ 0.17
PMPCA-205ENST00000462616 NRXN1Q9ULB1 1477 aa16.13■□□□□ 0.17
PMPCA-205ENST00000462616 MCM10Q7L590 875 aa16.12■□□□□ 0.17
PMPCA-205ENST00000462616 CFAP44Q96MT7 982 aa16.12■□□□□ 0.17
PMPCA-205ENST00000462616 IFT172Q9UG01 1749 aa16.12■□□□□ 0.17
PMPCA-205ENST00000462616 ADGRB1O14514 1584 aa16.12■□□□□ 0.17
PMPCA-205ENST00000462616 F6X3S4 739 aa16.12■□□□□ 0.17
PMPCA-205ENST00000462616 ZNF500O60304 480 aaPredicted RBP16.12■□□□□ 0.17
PMPCA-205ENST00000462616 C17orf53Q8N3J3 647 aaPredicted RBP16.12■□□□□ 0.17
PMPCA-205ENST00000462616 CEP85Q6P2H3 762 aa16.12■□□□□ 0.17
PMPCA-205ENST00000462616 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.12■□□□□ 0.17
PMPCA-205ENST00000462616 PDLIM2Q96JY6 352 aa16.12■□□□□ 0.17
PMPCA-205ENST00000462616 LARP6Q9BRS8 491 aaKnown RBP16.12■□□□□ 0.17
PMPCA-205ENST00000462616 CSPP1Q1MSJ5 1256 aa16.11■□□□□ 0.17
PMPCA-205ENST00000462616 ANKRD44Q8N8A2 993 aa16.11■□□□□ 0.17
PMPCA-205ENST00000462616 C3P01024 1663 aa16.11■□□□□ 0.17
PMPCA-205ENST00000462616 ADGRB3O60242 1522 aa16.11■□□□□ 0.17
PMPCA-205ENST00000462616 TSPY26PQ9H489 355 aa16.11■□□□□ 0.17
PMPCA-205ENST00000462616 HS1BP3Q53T59 392 aa16.11■□□□□ 0.17
PMPCA-205ENST00000462616 PUS7Q96PZ0 661 aaKnown RBP16.11■□□□□ 0.17
PMPCA-205ENST00000462616 NECTIN2Q92692 538 aa16.1■□□□□ 0.17
PMPCA-205ENST00000462616 SLC4A2P04920 1241 aa16.1■□□□□ 0.17
PMPCA-205ENST00000462616 BRPF1P55201 1214 aaPredicted RBP16.1■□□□□ 0.17
PMPCA-205ENST00000462616 GADD45BO75293 160 aaPredicted RBP16.09■□□□□ 0.17
PMPCA-205ENST00000462616 MYO3AQ8NEV4 1616 aa16.09■□□□□ 0.17
PMPCA-205ENST00000462616 NCKAP5LQ9HCH0 1330 aa16.09■□□□□ 0.17
PMPCA-205ENST00000462616 AEBP1Q8IUX7 1158 aa16.09■□□□□ 0.17
PMPCA-205ENST00000462616 USP25Q9UHP3 1055 aa16.09■□□□□ 0.17
PMPCA-205ENST00000462616 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.09■□□□□ 0.17
PMPCA-205ENST00000462616 COL3A1P02461 1466 aaPredicted RBP16.09■□□□□ 0.17
PMPCA-205ENST00000462616 MED14O60244 1454 aa16.08■□□□□ 0.17
PMPCA-205ENST00000462616 KIAA2012Q0VF49 1180 aa16.08■□□□□ 0.17
PMPCA-205ENST00000462616 RPAP2Q8IXW5 612 aaPredicted RBP16.08■□□□□ 0.17
PMPCA-205ENST00000462616 ZHX1Q9UKY1 873 aaPredicted RBP16.08■□□□□ 0.17
PMPCA-205ENST00000462616 PALD1Q9ULE6 856 aa16.08■□□□□ 0.17
PMPCA-205ENST00000462616 SETBP1Q9Y6X0 1596 aa16.08■□□□□ 0.16
PMPCA-205ENST00000462616 MBD3O95983 291 aa16.08■□□□□ 0.16
PMPCA-205ENST00000462616 SASS6Q6UVJ0 657 aa16.08■□□□□ 0.16
PMPCA-205ENST00000462616 TTC12Q9H892 705 aaPredicted RBP16.08■□□□□ 0.16
PMPCA-205ENST00000462616 NUTM2FA1L443 756 aa16.07■□□□□ 0.16
PMPCA-205ENST00000462616 LMOD3Q0VAK6 560 aa16.07■□□□□ 0.16
PMPCA-205ENST00000462616 MAP7D2Q96T17 732 aa16.07■□□□□ 0.16
PMPCA-205ENST00000462616 LRRC7Q96NW7 1537 aa16.07■□□□□ 0.16
PMPCA-205ENST00000462616 SULT6B1Q6IMI4 303 aa16.07■□□□□ 0.16
PMPCA-205ENST00000462616 PTCH1Q13635 1447 aa16.07■□□□□ 0.16
PMPCA-205ENST00000462616 ZNF853P0CG23 659 aa16.06■□□□□ 0.16
PMPCA-205ENST00000462616 IL13P35225 146 aa16.06■□□□□ 0.16
PMPCA-205ENST00000462616 MSH6P52701 1360 aa16.06■□□□□ 0.16
PMPCA-205ENST00000462616 MAP4K4O95819 1239 aaPredicted RBP16.06■□□□□ 0.16
PMPCA-205ENST00000462616 PDE1AP54750 535 aa16.06■□□□□ 0.16
PMPCA-205ENST00000462616 DYNC1I1O14576 645 aa16.06■□□□□ 0.16
PMPCA-205ENST00000462616 MCCP23508 829 aa16.06■□□□□ 0.16
PMPCA-205ENST00000462616 SYAP1Q96A49 352 aaPredicted RBP16.06■□□□□ 0.16
PMPCA-205ENST00000462616 HMMRO75330 724 aa16.05■□□□□ 0.16
PMPCA-205ENST00000462616 FAM135BQ49AJ0 1406 aa16.05■□□□□ 0.16
PMPCA-205ENST00000462616 TMEM131LA2VDJ0 1609 aa16.05■□□□□ 0.16
PMPCA-205ENST00000462616 TERF1P54274 439 aa16.05■□□□□ 0.16
PMPCA-205ENST00000462616 FBXO31Q5XUX0 539 aaPredicted RBP16.05■□□□□ 0.16
PMPCA-205ENST00000462616 USP48Q86UV5 1035 aa16.04■□□□□ 0.16
PMPCA-205ENST00000462616 COG3Q96JB2 828 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms